RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 ELMO1Q92556 727 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 GLMNQ92990 594 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 FKBP10Q96AY3 582 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 PYCR2Q96C36 320 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 APIPQ96GX9 242 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 HSH2DQ96JZ2 352 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 ZNF558Q96NG5 402 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 MCCC1Q96RQ3 725 aaPredicted RBP6.78□□□□□ -1.32
TDP1-213ENST00000555880 CSF3RQ99062 836 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 EBPLQ9BY08 206 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 CEP44Q9C0F1 390 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 BRD9Q9H8M2 597 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 PAK1IP1Q9NWT1 392 aaPredicted RBP6.78□□□□□ -1.32
TDP1-213ENST00000555880 ADPRHL2Q9NX46 363 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 VNN3Q9NY84 501 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 PDP1Q9P0J1 537 aaPredicted RBP6.78□□□□□ -1.32
TDP1-213ENST00000555880 VPS29Q9UBQ0 182 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 MAFFQ9ULX9 164 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 ABCG2Q9UNQ0 655 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 RUVBL1Q9Y265 456 aaKnown RBP6.78□□□□□ -1.32
TDP1-213ENST00000555880 SLC22A14Q9Y267 594 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 AP1M2Q9Y6Q5 423 aa6.78□□□□□ -1.32
TDP1-213ENST00000555880 NUP214P35658 2090 aaPredicted RBP6.77□□□□□ -1.33
TDP1-213ENST00000555880 TRAV19A0A0A6YYK7 116 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 FUOMA2VDF0 154 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 SOBPA7XYQ1 873 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 GFYI3L273 518 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 QSOX1O00391 747 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 ZNF821O75541 412 aaPredicted RBP6.77□□□□□ -1.33
TDP1-213ENST00000555880 AP2A2O94973 939 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 KCNK5O95279 499 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 POP4O95707 220 aaKnown RBP6.77□□□□□ -1.33
TDP1-213ENST00000555880 UGT2B4P06133 528 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 SRCP12931 536 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 HSD3B1P14060 373 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 GPX2P18283 190 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 NDUFV2P19404 249 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 NR4A1P22736 598 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 HSD3B2P26439 372 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 PSMB9P28065 219 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 GABRR2P28476 465 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 KDELR2P33947 212 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 RECQLP46063 649 aaPredicted RBP6.77□□□□□ -1.33
TDP1-213ENST00000555880 SPINT3P49223 89 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 STK19P49842 368 aaPredicted RBP6.77□□□□□ -1.33
TDP1-213ENST00000555880 DAPP51397 102 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 BCAP31P51572 246 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 PSMD7P51665 324 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 ITGA1P56199 1179 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 CSNK2BP67870 215 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 SLC35A2P78381 396 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 PTSQ03393 145 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 LRRC74AQ0VAA2 488 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 AQP6Q13520 282 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 DDX39BQ13838 428 aaKnown RBP6.77□□□□□ -1.33
TDP1-213ENST00000555880 VEZF1Q14119 521 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 GBX1Q14549 363 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 TCTN1Q2MV58 587 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 CARD16Q5EG05 197 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 LDLRAP1Q5SW96 308 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 ANXA8L1Q5VT79 327 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 EGFLAMQ63HQ2 1017 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 LAIR2Q6ISS4 152 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 CEP68Q76N32 757 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 EIF3MQ7L2H7 374 aaKnown RBP6.77□□□□□ -1.33
TDP1-213ENST00000555880 IGFN1Q86VF2 1251 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 CYP4Z1Q86W10 505 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 BBS7Q8IWZ6 715 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 MINDY2Q8NBR6 621 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 OR8J2Q8NGG1 315 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 SNIP1Q8TAD8 396 aaKnown RBP6.77□□□□□ -1.33
TDP1-213ENST00000555880 IPCEF1Q8WWN9 437 aaPredicted RBP6.77□□□□□ -1.33
TDP1-213ENST00000555880 CLP1Q92989 425 aaKnown RBP6.77□□□□□ -1.33
TDP1-213ENST00000555880 ECHDC3Q96DC8 303 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 SH3YL1Q96HL8 342 aaPredicted RBP6.77□□□□□ -1.33
TDP1-213ENST00000555880 SCLYQ96I15 445 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 METTL2AQ96IZ6 378 aaKnown RBP6.77□□□□□ -1.33
TDP1-213ENST00000555880 TPD52L3Q96J77 140 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 EGLN2Q96KS0 407 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 FCRL1Q96LA6 429 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 HHIPQ96QV1 700 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 P2RY13Q9BPV8 354 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 HERC2P3Q9BVR0 1158 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 CPEB1Q9BZB8 566 aaKnown RBP6.77□□□□□ -1.33
TDP1-213ENST00000555880 DUSP21Q9H596 190 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 RUBCNLQ9H714 662 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 ZNF334Q9HCZ1 680 aaPredicted RBP6.77□□□□□ -1.33
TDP1-213ENST00000555880 SELENONQ9NZV5 590 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 ERVK-18Q9QC07 812 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 DAPK2Q9UIK4 370 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 HS3ST2Q9Y278 367 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 PPIL1Q9Y3C6 166 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 CORINQ9Y5Q5 1042 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 MGAT4DA6NG13 374 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 BOLA2-SMG1P6H3BVE0 249 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 GRM6O15303 877 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 SUV39H1O43463 412 aa6.77□□□□□ -1.33
TDP1-213ENST00000555880 NADKO95544 446 aaPredicted RBP6.77□□□□□ -1.33
TDP1-213ENST00000555880 FADS2O95864 444 aaKnown RBP6.77□□□□□ -1.33
TDP1-213ENST00000555880 B3GALT4O96024 378 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms