RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 SHISA6Q6ZSJ9 500 aa19.53■□□□□ 0.72
VTI1B-205ENST00000555543 SPATA6LQ8N4H0 392 aa19.53■□□□□ 0.72
VTI1B-205ENST00000555543 PPM1NQ8N819 430 aa19.53■□□□□ 0.72
VTI1B-205ENST00000555543 FBF1Q8TES7 1133 aa19.53■□□□□ 0.72
VTI1B-205ENST00000555543 ANKRD7Q92527 254 aa19.53■□□□□ 0.72
VTI1B-205ENST00000555543 PTERQ96BW5 349 aa19.53■□□□□ 0.72
VTI1B-205ENST00000555543 WDR54Q9H977 334 aa19.53■□□□□ 0.72
VTI1B-205ENST00000555543 ZNF304Q9HCX3 659 aa19.53■□□□□ 0.72
VTI1B-205ENST00000555543 TXNDC16Q9P2K2 825 aa19.53■□□□□ 0.72
VTI1B-205ENST00000555543 MRPS2Q9Y399 296 aaKnown RBP19.53■□□□□ 0.72
VTI1B-205ENST00000555543 FEZF1A0PJY2 475 aa19.52■□□□□ 0.72
VTI1B-205ENST00000555543 PYCARD-AS1I3L0S3 204 aa19.52■□□□□ 0.72
VTI1B-205ENST00000555543 MASP2O00187 686 aa19.52■□□□□ 0.72
VTI1B-205ENST00000555543 PIM1P11309 404 aaPredicted RBP19.52■□□□□ 0.72
VTI1B-205ENST00000555543 STX2P32856 288 aa19.52■□□□□ 0.72
VTI1B-205ENST00000555543 GMPRP36959 345 aa19.52■□□□□ 0.72
VTI1B-205ENST00000555543 BCL6P41182 706 aa19.52■□□□□ 0.72
VTI1B-205ENST00000555543 SLC12A2P55011 1212 aa19.52■□□□□ 0.72
VTI1B-205ENST00000555543 ILF2Q12905 390 aaKnown RBP19.52■□□□□ 0.72
VTI1B-205ENST00000555543 USP10Q14694 798 aaKnown RBP19.52■□□□□ 0.72
VTI1B-205ENST00000555543 COLEC12Q5KU26 742 aa19.52■□□□□ 0.72
VTI1B-205ENST00000555543 PRMT9Q6P2P2 845 aa19.52■□□□□ 0.72
VTI1B-205ENST00000555543 ATL1Q8WXF7 558 aa19.52■□□□□ 0.72
VTI1B-205ENST00000555543 COL26A1Q96A83 441 aa19.52■□□□□ 0.72
VTI1B-205ENST00000555543 TRIM44Q96DX7 344 aaPredicted RBP19.52■□□□□ 0.72
VTI1B-205ENST00000555543 MACROD1Q9BQ69 325 aa19.52■□□□□ 0.72
VTI1B-205ENST00000555543 SOX17Q9H6I2 414 aaPredicted RBP19.52■□□□□ 0.72
VTI1B-205ENST00000555543 VSTM2BA6NLU5 285 aa19.51■□□□□ 0.71
VTI1B-205ENST00000555543 FFAR3O14843 346 aa19.51■□□□□ 0.71
VTI1B-205ENST00000555543 GPR42O15529 346 aa19.51■□□□□ 0.71
VTI1B-205ENST00000555543 FOXS1O43638 330 aa19.51■□□□□ 0.71
VTI1B-205ENST00000555543 LCMT2O60294 686 aaKnown RBP19.51■□□□□ 0.71
VTI1B-205ENST00000555543 CEACAM4O75871 244 aa19.51■□□□□ 0.71
VTI1B-205ENST00000555543 FBLP22087 321 aaKnown RBP19.51■□□□□ 0.71
VTI1B-205ENST00000555543 RPS15AP62244 130 aaKnown RBP19.51■□□□□ 0.71
VTI1B-205ENST00000555543 MEF2AQ02078 507 aaPredicted RBP19.51■□□□□ 0.71
VTI1B-205ENST00000555543 ZKSCAN8Q15776 578 aaPredicted RBP19.51■□□□□ 0.71
VTI1B-205ENST00000555543 MED25Q71SY5 747 aa19.51■□□□□ 0.71
VTI1B-205ENST00000555543 ADAMTSL2Q86TH1 951 aa19.51■□□□□ 0.71
VTI1B-205ENST00000555543 TMEM102Q8N9M5 508 aaPredicted RBP19.51■□□□□ 0.71
VTI1B-205ENST00000555543 MESP1Q9BRJ9 268 aa19.51■□□□□ 0.71
VTI1B-205ENST00000555543 HAUS8Q9BT25 410 aa19.51■□□□□ 0.71
VTI1B-205ENST00000555543 DERL2Q9GZP9 239 aa19.51■□□□□ 0.71
VTI1B-205ENST00000555543 P4HTMQ9NXG6 502 aa19.51■□□□□ 0.71
VTI1B-205ENST00000555543 CTNNAL1Q9UBT7 734 aa19.51■□□□□ 0.71
VTI1B-205ENST00000555543 OARD1Q9Y530 152 aa19.51■□□□□ 0.71
VTI1B-205ENST00000555543 TNRC6AQ8NDV7 1962 aaKnown RBP19.51■□□□□ 0.71
VTI1B-205ENST00000555543 KCNE1BA0A087WTH5 132 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 A0A0A6YYC8 382 aaPredicted RBP19.5■□□□□ 0.71
VTI1B-205ENST00000555543 CTAGE15A4D2H0 777 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 I3L1I5 382 aaPredicted RBP19.5■□□□□ 0.71
VTI1B-205ENST00000555543 KIF2AO00139 706 aaPredicted RBP19.5■□□□□ 0.71
VTI1B-205ENST00000555543 TUBB4AP04350 444 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 CTAGE8P0CG41 777 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 STMN1P16949 149 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 CDKL1Q00532 357 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 DSG2Q14126 1118 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 C18orf21Q32NC0 220 aaPredicted RBP19.5■□□□□ 0.71
VTI1B-205ENST00000555543 CATSPEREQ5SY80 951 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 GRTP1Q5TC63 336 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 GARNL3Q5VVW2 1013 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 ASB18Q6ZVZ8 466 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 CTAGE6Q86UF2 777 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 CTAGE4Q8IX94 777 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 PRSS58Q8IYP2 241 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 AMER3Q8N944 861 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 MNS1Q8NEH6 495 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 ABHD11Q8NFV4 315 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 STT3BQ8TCJ2 826 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 NEIL2Q969S2 332 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 MVB12AQ96EY5 273 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 TSPAN17Q96FV3 270 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 TSNARE1Q96NA8 513 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 IP6K3Q96PC2 410 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 SLC25A23Q9BV35 468 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 TRIM4Q9C037 500 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 DRC3Q9H069 523 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 SPNS1Q9H2V7 528 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 MLXIPLQ9NP71 852 aa19.5■□□□□ 0.71
VTI1B-205ENST00000555543 NXT1Q9UKK6 140 aaKnown RBP19.5■□□□□ 0.71
VTI1B-205ENST00000555543 PCDHGA9Q9Y5G4 932 aaKnown RBP19.5■□□□□ 0.71
VTI1B-205ENST00000555543 A6NL46 340 aa19.49■□□□□ 0.71
VTI1B-205ENST00000555543 TXNDC9O14530 226 aa19.49■□□□□ 0.71
VTI1B-205ENST00000555543 SOCS6O14544 535 aa19.49■□□□□ 0.71
VTI1B-205ENST00000555543 CCDC166P0CW27 439 aa19.49■□□□□ 0.71
VTI1B-205ENST00000555543 MMP11P24347 488 aa19.49■□□□□ 0.71
VTI1B-205ENST00000555543 ECHS1P30084 290 aa19.49■□□□□ 0.71
VTI1B-205ENST00000555543 SPRP35270 261 aaPredicted RBP19.49■□□□□ 0.71
VTI1B-205ENST00000555543 RRADP55042 308 aa19.49■□□□□ 0.71
VTI1B-205ENST00000555543 KLC1Q07866 573 aa19.49■□□□□ 0.71
VTI1B-205ENST00000555543 DCAF10Q5QP82 559 aa19.49■□□□□ 0.71
VTI1B-205ENST00000555543 PRSS41Q7RTY9 318 aa19.49■□□□□ 0.71
VTI1B-205ENST00000555543 CMC1Q7Z7K0 106 aa19.49■□□□□ 0.71
VTI1B-205ENST00000555543 FDCSPQ8NFU4 85 aa19.49■□□□□ 0.71
VTI1B-205ENST00000555543 OR4K1Q8NGD4 311 aa19.49■□□□□ 0.71
VTI1B-205ENST00000555543 MMABQ96EY8 250 aaPredicted RBP19.49■□□□□ 0.71
VTI1B-205ENST00000555543 EGFL8Q99944 293 aa19.49■□□□□ 0.71
VTI1B-205ENST00000555543 NUDT9Q9BW91 350 aa19.49■□□□□ 0.71
VTI1B-205ENST00000555543 NINJ2Q9NZG7 142 aa19.49■□□□□ 0.71
VTI1B-205ENST00000555543 ZNF282Q9UDV7 671 aaPredicted RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms