RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 EMP3P54852 163 aa11.55□□□□□ -0.56
SRP54-206ENST00000555317 POLE2P56282 527 aa11.55□□□□□ -0.56
SRP54-206ENST00000555317 IL10RAQ13651 578 aa11.55□□□□□ -0.56
SRP54-206ENST00000555317 COL9A2Q14055 689 aaPredicted RBP11.55□□□□□ -0.56
SRP54-206ENST00000555317 LY6DQ14210 128 aa11.55□□□□□ -0.56
SRP54-206ENST00000555317 TGFBIQ15582 683 aa11.55□□□□□ -0.56
SRP54-206ENST00000555317 FAM83EQ2M2I3 478 aa11.55□□□□□ -0.56
SRP54-206ENST00000555317 SOWAHCQ53LP3 525 aaPredicted RBP11.55□□□□□ -0.56
SRP54-206ENST00000555317 GARNL3Q5VVW2 1013 aa11.55□□□□□ -0.56
SRP54-206ENST00000555317 ZNF385CQ66K41 422 aaPredicted RBP11.55□□□□□ -0.56
SRP54-206ENST00000555317 PRMT9Q6P2P2 845 aa11.55□□□□□ -0.56
SRP54-206ENST00000555317 TRMT10CQ7L0Y3 403 aaKnown RBP11.55□□□□□ -0.56
SRP54-206ENST00000555317 THOC6Q86W42 341 aaKnown RBP11.55□□□□□ -0.56
SRP54-206ENST00000555317 STAG3L4Q8TBR4 150 aa11.55□□□□□ -0.56
SRP54-206ENST00000555317 FKBP10Q96AY3 582 aa11.55□□□□□ -0.56
SRP54-206ENST00000555317 TSNARE1Q96NA8 513 aa11.55□□□□□ -0.56
SRP54-206ENST00000555317 OR2A5Q96R48 311 aa11.55□□□□□ -0.56
SRP54-206ENST00000555317 PAFAH2Q99487 392 aa11.55□□□□□ -0.56
SRP54-206ENST00000555317 ALG9Q9H6U8 611 aa11.55□□□□□ -0.56
SRP54-206ENST00000555317 L2HGDHQ9H9P8 463 aa11.55□□□□□ -0.56
SRP54-206ENST00000555317 PRM3Q9NNZ6 103 aa11.55□□□□□ -0.56
SRP54-206ENST00000555317 SNX15Q9NRS6 342 aa11.55□□□□□ -0.56
SRP54-206ENST00000555317 PTRH2Q9Y3E5 179 aaKnown RBP11.55□□□□□ -0.56
SRP54-206ENST00000555317 KCNE2Q9Y6J6 123 aa11.55□□□□□ -0.56
SRP54-206ENST00000555317 SYCE1LA8MT33 242 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 SUPT3HB4E1H0 165 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 POC1B-GALNT4F8VUJ3 575 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 SUPT3HO75486 399 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 RFPL1O75677 317 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 SLC35G6P0C7Q6 338 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 NPPBP16860 134 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 TFEBP19484 476 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 ITGAXP20702 1163 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 CNTFP26441 200 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 OTX2P32243 289 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 OR1D4P47884 311 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 AVPR1BP47901 424 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 PMS2P54278 862 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 CSNK1G2P78368 415 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 NFKB2Q00653 900 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 OCA2Q04671 838 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 KCNAB2Q13303 367 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 HKDC1Q2TB90 917 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 PRTGQ2VWP7 1150 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 CDKL4Q5MAI5 379 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 LGSNQ5TDP6 509 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 SULT1C3Q6IMI6 304 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 TMPRSS11BQ86T26 416 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 CAMKVQ8NCB2 501 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 OR2Y1Q8NGV0 311 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 UHMK1Q8TAS1 419 aaKnown RBP11.54□□□□□ -0.56
SRP54-206ENST00000555317 SLC44A1Q8WWI5 657 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 KIAA1191Q96A73 305 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 RHBDF1Q96CC6 855 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 MVB12AQ96EY5 273 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 UBXN10Q96LJ8 280 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 IP6K3Q96PC2 410 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 BBC3Q96PG8 261 aaPredicted RBP11.54□□□□□ -0.56
SRP54-206ENST00000555317 AIF1LQ9BQI0 150 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 YIPF2Q9BWQ6 316 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 FUT8Q9BYC5 575 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 DRC3Q9H069 523 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 VPS11Q9H270 941 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 ADNPQ9H2P0 1102 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 WDR54Q9H977 334 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 PELI2Q9HAT8 420 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 ZNF304Q9HCX3 659 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 ENAMQ9NRM1 1142 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 NUDT4Q9NZJ9 180 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 NXT1Q9UKK6 140 aaKnown RBP11.54□□□□□ -0.56
SRP54-206ENST00000555317 G3BP2Q9UN86 482 aaKnown RBP11.54□□□□□ -0.56
SRP54-206ENST00000555317 SH2B3Q9UQQ2 575 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 RUVBL1Q9Y265 456 aaKnown RBP11.54□□□□□ -0.56
SRP54-206ENST00000555317 SLC22A14Q9Y267 594 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 MAU2Q9Y6X3 613 aa11.54□□□□□ -0.56
SRP54-206ENST00000555317 KCNE1BA0A087WTH5 132 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 A0A096LPK6 155 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 FEZF1A0PJY2 475 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 PEX12O00623 359 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 OR1F1O43749 312 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 H2AFYO75367 372 aaKnown RBP11.53□□□□□ -0.56
SRP54-206ENST00000555317 WISP3O95389 354 aaPredicted RBP11.53□□□□□ -0.56
SRP54-206ENST00000555317 ALBP02768 609 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 STATHP02808 62 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 SERPIND1P05546 499 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 CAPN1P07384 714 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 ABHD2P08910 425 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 GNAZP19086 355 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 CXCR2P25025 360 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 BCL6P41182 706 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 GCGRP47871 477 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 RRADP55042 308 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 MEF2AQ02078 507 aaPredicted RBP11.53□□□□□ -0.56
SRP54-206ENST00000555317 OR4D1Q15615 310 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 LINC00303Q3SY05 128 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 FAM69BQ5VUD6 431 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 OVCH1Q7RTY7 1134 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 ASPGQ86U10 573 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 SNX31Q8N9S9 440 aa11.53□□□□□ -0.56
SRP54-206ENST00000555317 MFSD9Q8NBP5 474 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms