RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 TMEM150CB9EJG8 249 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 H3BQF6 201 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 NRP2O60462 931 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 FGF5P12034 268 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 ITIH1P19827 911 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 VARSP26640 1264 aaKnown RBP13.68□□□□□ -0.22
CHD8-208ENST00000555301 GSTM2P28161 218 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 ARL1P40616 181 aaPredicted RBP13.68□□□□□ -0.22
CHD8-208ENST00000555301 HNF4AP41235 474 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 GABRA4P48169 554 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 MAPK10P53779 464 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 CDH13P55290 713 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 GABREP78334 506 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 LCP2Q13094 533 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 CAMK2BQ13554 666 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 DOC2AQ14183 400 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 SLBPQ14493 270 aaKnown RBP eCLIP13.68□□□□□ -0.22
CHD8-208ENST00000555301 GPR19Q15760 415 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 RBBP7Q16576 425 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 TCTE1Q5JU00 501 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 DCAF12Q5T6F0 453 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 FOXR1Q6PIV2 292 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 CEACAM20Q6UY09 585 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 ERMP1Q7Z2K6 904 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 PPP1R3BQ86XI6 285 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 MARCH9Q86YJ5 346 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 NUDCD3Q8IVD9 361 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 GPR135Q8IZ08 494 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 LSMEM2Q8N112 164 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 TTLQ8NG68 377 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 TRPC4APQ8TEL6 797 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 UBE2E3Q969T4 207 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 RERGQ96A58 199 aaPredicted RBP13.68□□□□□ -0.22
CHD8-208ENST00000555301 NSUN5Q96P11 429 aaKnown RBP13.68□□□□□ -0.22
CHD8-208ENST00000555301 FCRL4Q96PJ5 515 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 TEFMQ96QE5 360 aaKnown RBP13.68□□□□□ -0.22
CHD8-208ENST00000555301 OR2A5Q96R48 311 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 TAAR9Q96RI9 348 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 TRMOQ9BU70 441 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 MECRQ9BV79 373 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 DDA1Q9BW61 102 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 B3GNT4Q9C0J1 378 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 DRC3Q9H069 523 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 NT5DC2Q9H857 520 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 GEMIN8Q9NWZ8 242 aaKnown RBP13.68□□□□□ -0.22
CHD8-208ENST00000555301 MSRB2Q9Y3D2 182 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 PCDHGA3Q9Y5H0 932 aa13.68□□□□□ -0.22
CHD8-208ENST00000555301 A0A1W2PNU3 283 aaPredicted RBP13.67□□□□□ -0.22
CHD8-208ENST00000555301 FEZF1A0PJY2 475 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 TXNDC9O14530 226 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 OR7A17O14581 309 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 OR1F1O43749 312 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 PRAMEF4O60810 478 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 CLDN9O95484 217 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 NEFHP12036 1026 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 RBMS1P29558 406 aaKnown RBP13.67□□□□□ -0.22
CHD8-208ENST00000555301 SERPINB5P36952 375 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 SCTRP47872 440 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 ITGA1P56199 1179 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 PPP2R2AP63151 447 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 MEF2AQ02078 507 aaPredicted RBP13.67□□□□□ -0.22
CHD8-208ENST00000555301 CYP4F3Q08477 520 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 RTP5Q14D33 572 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 RBBP5Q15291 538 aaKnown RBP13.67□□□□□ -0.22
CHD8-208ENST00000555301 DEFB110Q30KQ9 67 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.67□□□□□ -0.22
CHD8-208ENST00000555301 PRAMEF9Q5VWM5 478 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 GRHL2Q6ISB3 625 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 IGF2-ASQ6U949 168 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 TMIGD1Q6UXZ0 262 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 FRMD7Q6ZUT3 714 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 MILR1Q7Z6M3 343 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 MYLK4Q86YV6 388 aaPredicted RBP13.67□□□□□ -0.22
CHD8-208ENST00000555301 PLD3Q8IV08 490 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 ZNF655Q8N720 491 aaPredicted RBP13.67□□□□□ -0.22
CHD8-208ENST00000555301 L3MBTL4Q8NA19 623 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 MFSD9Q8NBP5 474 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 OR52B6Q8NGF0 335 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 PPP1R14CQ8TAE6 165 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 PRR11Q96HE9 360 aaPredicted RBP13.67□□□□□ -0.22
CHD8-208ENST00000555301 SEC16BQ96JE7 1060 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 CNDP1Q96KN2 507 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 ZNF285Q96NJ3 590 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 ZNF382Q96SR6 550 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 PAIP2Q9BPZ3 127 aaKnown RBP13.67□□□□□ -0.22
CHD8-208ENST00000555301 GATA5Q9BWX5 397 aaPredicted RBP13.67□□□□□ -0.22
CHD8-208ENST00000555301 GSTO2Q9H4Y5 243 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 ENAMQ9NRM1 1142 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 IRAK4Q9NWZ3 460 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 PCDHGA4Q9Y5G9 962 aa13.67□□□□□ -0.22
CHD8-208ENST00000555301 COL27A1Q8IZC6 1860 aaPredicted RBP13.66□□□□□ -0.22
CHD8-208ENST00000555301 DCHS1Q96JQ0 3298 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 H0YGG7 62 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 HCRTR1O43613 425 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 NPHS1O60500 1241 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 OR2B3O76000 313 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 TNFSF15O95150 251 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 AHRP35869 848 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 ETV5P41161 510 aa13.66□□□□□ -0.22
CHD8-208ENST00000555301 BCL6P41182 706 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms