RNA–Protein interactions for RNA: ENST00000554974.5

XRCC3-210, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4 BASIC

Gene XRCC3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-210ENST00000554974 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.3□□□□□ -0.128e-6■■■■□ 20.1
XRCC3-210ENST00000554974 TREX1Q9NSU2 369 aa14.3□□□□□ -0.12
XRCC3-210ENST00000554974 BFARQ9NZS9 450 aa14.3□□□□□ -0.12
XRCC3-210ENST00000554974 SPATA7Q9P0W8 599 aa14.3□□□□□ -0.12
XRCC3-210ENST00000554974 HEATR5BQ9P2D3 2071 aa14.3□□□□□ -0.12
XRCC3-210ENST00000554974 IGKV1-8A0A0C4DH67 115 aa14.29□□□□□ -0.12
XRCC3-210ENST00000554974 ARHGEF33A8MVX0 844 aa14.29□□□□□ -0.12
XRCC3-210ENST00000554974 GOLGA8KD6RF30 607 aa14.29□□□□□ -0.12
XRCC3-210ENST00000554974 GOLGA8TH3BQL2 631 aa14.29□□□□□ -0.12
XRCC3-210ENST00000554974 SMAPO00193 183 aa14.29□□□□□ -0.12
XRCC3-210ENST00000554974 NDUFS3O75489 264 aa14.29□□□□□ -0.12
XRCC3-210ENST00000554974 SEC31AO94979 1220 aaKnown RBP14.29□□□□□ -0.12
XRCC3-210ENST00000554974 BMP10O95393 424 aa14.29□□□□□ -0.12
XRCC3-210ENST00000554974 WDPCPO95876 746 aa14.29□□□□□ -0.12
XRCC3-210ENST00000554974 SNRPB2P08579 225 aaKnown RBP14.29□□□□□ -0.12
XRCC3-210ENST00000554974 ITGAMP11215 1152 aa14.29□□□□□ -0.12
XRCC3-210ENST00000554974 FDXRP22570 491 aa14.29□□□□□ -0.12
XRCC3-210ENST00000554974 ARNTP27540 789 aa14.29□□□□□ -0.12
XRCC3-210ENST00000554974 PMP22Q01453 160 aa14.29□□□□□ -0.12
XRCC3-210ENST00000554974 MORF4L2Q15014 288 aa14.29□□□□□ -0.12
XRCC3-210ENST00000554974 PCOLCEQ15113 449 aa14.29□□□□□ -0.12
XRCC3-210ENST00000554974 HIBCHQ6NVY1 386 aaPredicted RBP14.29□□□□□ -0.12
XRCC3-210ENST00000554974 PAQR7Q86WK9 346 aa14.29□□□□□ -0.12
XRCC3-210ENST00000554974 HAS2Q92819 552 aa14.29□□□□□ -0.12
XRCC3-210ENST00000554974 MMABQ96EY8 250 aaPredicted RBP14.29□□□□□ -0.12
XRCC3-210ENST00000554974 FOPNLQ96NB1 174 aa14.29□□□□□ -0.12
XRCC3-210ENST00000554974 KIFC1Q9BW19 673 aa14.29□□□□□ -0.12
XRCC3-210ENST00000554974 MRPS30Q9NP92 439 aaKnown RBP14.29□□□□□ -0.12
XRCC3-210ENST00000554974 C14orf105Q9NVL8 296 aa14.29□□□□□ -0.12
XRCC3-210ENST00000554974 RIC8BQ9NVN3 520 aa14.29□□□□□ -0.12
XRCC3-210ENST00000554974 POLQO75417 2590 aa14.29□□□□□ -0.12
XRCC3-210ENST00000554974 A0A0A6YYC8 382 aaPredicted RBP14.28□□□□□ -0.12
XRCC3-210ENST00000554974 I3L1I5 382 aaPredicted RBP14.28□□□□□ -0.12
XRCC3-210ENST00000554974 CCL21O00585 134 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 KPNA5O15131 536 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 P2RX6O15547 441 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 AVILO75366 819 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 VPS26AO75436 327 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 WFS1O76024 890 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 MATN4O95460 622 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 F8P00451 2351 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 STATHP02808 62 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 HEXBP07686 556 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 ERGP11308 486 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 RPS3P23396 243 aaKnown RBP eCLIP14.28□□□□□ -0.12
XRCC3-210ENST00000554974 MGAT1P26572 445 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 FMO4P31512 558 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 RPA3P35244 121 aaPredicted RBP14.28□□□□□ -0.12
XRCC3-210ENST00000554974 TERF1P54274 439 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 SNRPNP63162 240 aaKnown RBP14.28□□□□□ -0.12
XRCC3-210ENST00000554974 MAT1AQ00266 395 aaKnown RBP14.28□□□□□ -0.12
XRCC3-210ENST00000554974 CBLBQ13191 982 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 ART3Q13508 389 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 CES3Q6UWW8 571 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 TMEM207Q6UWW9 146 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 NEK10Q6ZWH5 1172 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 LRRC6Q86X45 466 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 SPNS2Q8IVW8 549 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 ZC3H7AQ8IWR0 971 aaKnown RBP14.28□□□□□ -0.12
XRCC3-210ENST00000554974 SHISA5Q8N114 240 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 MPP5Q8N3R9 675 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 LPGAT1Q92604 370 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 SNF8Q96H20 258 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 BIRC8Q96P09 236 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 PLCD4Q9BRC7 762 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 ERP44Q9BS26 406 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 SYBUQ9NX95 663 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 GALPQ9UBC7 116 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 SUCOQ9UBS9 1254 aaKnown RBP14.28□□□□□ -0.12
XRCC3-210ENST00000554974 SEC14L3Q9UDX4 400 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 TAC3Q9UHF0 121 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 SOX13Q9UN79 622 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 CDC14AQ9UNH5 594 aa14.28□□□□□ -0.12
XRCC3-210ENST00000554974 EFCAB8A8MWE9 144 aa14.27□□□□□ -0.13
XRCC3-210ENST00000554974 GOLGA8MH3BSY2 632 aa14.27□□□□□ -0.13
XRCC3-210ENST00000554974 PRPF4O43172 522 aaKnown RBP eCLIP14.27□□□□□ -0.132e-9■■■■■ 39.8
XRCC3-210ENST00000554974 FOXS1O43638 330 aa14.27□□□□□ -0.13
XRCC3-210ENST00000554974 ZNF500O60304 480 aaPredicted RBP14.27□□□□□ -0.13
XRCC3-210ENST00000554974 WISP2O76076 250 aa14.27□□□□□ -0.13
XRCC3-210ENST00000554974 VAPBO95292 243 aa14.27□□□□□ -0.13
XRCC3-210ENST00000554974 RASAL1O95294 804 aa14.27□□□□□ -0.13
XRCC3-210ENST00000554974 ANXA5P08758 320 aa14.27□□□□□ -0.13
XRCC3-210ENST00000554974 SLC26A3P40879 764 aa14.27□□□□□ -0.13
XRCC3-210ENST00000554974 RPL21P46778 160 aaKnown RBP14.27□□□□□ -0.13
XRCC3-210ENST00000554974 EMP3P54852 163 aa14.27□□□□□ -0.13
XRCC3-210ENST00000554974 ZNF33BQ06732 778 aa14.27□□□□□ -0.13
XRCC3-210ENST00000554974 GBX1Q14549 363 aa14.27□□□□□ -0.13
XRCC3-210ENST00000554974 NAA25Q14CX7 972 aa14.27□□□□□ -0.13
XRCC3-210ENST00000554974 ACSBG2Q5FVE4 666 aa14.27□□□□□ -0.13
XRCC3-210ENST00000554974 DUPD1Q68J44 220 aa14.27□□□□□ -0.13
XRCC3-210ENST00000554974 RIPOR1Q6ZS17 1223 aa14.27□□□□□ -0.13
XRCC3-210ENST00000554974 MRGPRGQ86SM5 289 aa14.27□□□□□ -0.13
XRCC3-210ENST00000554974 AGGF1Q8N302 714 aaeCLIP14.27□□□□□ -0.13
XRCC3-210ENST00000554974 ARHGEF39Q8N4T4 335 aa14.27□□□□□ -0.13
XRCC3-210ENST00000554974 MMGT1Q8N4V1 131 aa14.27□□□□□ -0.13
XRCC3-210ENST00000554974 PPFIBP2Q8ND30 876 aa14.27□□□□□ -0.13
XRCC3-210ENST00000554974 MNS1Q8NEH6 495 aa14.27□□□□□ -0.13
XRCC3-210ENST00000554974 OR9A1PQ8NGU1 263 aa14.27□□□□□ -0.13
XRCC3-210ENST00000554974 MAGEC3Q8TD91 643 aa14.27□□□□□ -0.13
XRCC3-210ENST00000554974 SMPDL3AQ92484 453 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms