RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 TAGAPQ8N103 731 aa15.18■□□□□ 0.02
SYNE3-203ENST00000554873 NLGN2Q8NFZ4 835 aa15.18■□□□□ 0.02
SYNE3-203ENST00000554873 GTF3C2Q8WUA4 911 aaPredicted RBP15.18■□□□□ 0.02
SYNE3-203ENST00000554873 OPALINQ96PE5 141 aa15.18■□□□□ 0.02
SYNE3-203ENST00000554873 ACBD6Q9BR61 282 aa15.18■□□□□ 0.02
SYNE3-203ENST00000554873 PPIL3Q9H2H8 161 aaKnown RBP15.18■□□□□ 0.02
SYNE3-203ENST00000554873 POLMQ9NP87 494 aaPredicted RBP15.18■□□□□ 0.02
SYNE3-203ENST00000554873 VNN3Q9NY84 501 aa15.18■□□□□ 0.02
SYNE3-203ENST00000554873 SCML1Q9UN30 329 aa15.18■□□□□ 0.02
SYNE3-203ENST00000554873 ARL5CA6NH57 179 aa15.18■□□□□ 0.02
SYNE3-203ENST00000554873 CDK1P06493 297 aa15.18■□□□□ 0.02
SYNE3-203ENST00000554873 HAPLN1P10915 354 aaPredicted RBP15.18■□□□□ 0.02
SYNE3-203ENST00000554873 ARHGDIAP52565 204 aa15.18■□□□□ 0.02
SYNE3-203ENST00000554873 GBX2P52951 348 aaPredicted RBP15.18■□□□□ 0.02
SYNE3-203ENST00000554873 BTN1A1Q13410 526 aa15.18■□□□□ 0.02
SYNE3-203ENST00000554873 GRB14Q14449 540 aa15.18■□□□□ 0.02
SYNE3-203ENST00000554873 GRK1Q15835 563 aa15.18■□□□□ 0.02
SYNE3-203ENST00000554873 MARC1Q5VT66 337 aa15.18■□□□□ 0.02
SYNE3-203ENST00000554873 RAB44Q7Z6P3 723 aaPredicted RBP15.18■□□□□ 0.02
SYNE3-203ENST00000554873 KRT73Q86Y46 540 aa15.18■□□□□ 0.02
SYNE3-203ENST00000554873 FAM181AQ8N9Y4 354 aa15.18■□□□□ 0.02
SYNE3-203ENST00000554873 OR52H1Q8NGJ2 320 aa15.18■□□□□ 0.02
SYNE3-203ENST00000554873 PABPC5Q96DU9 382 aaKnown RBP15.18■□□□□ 0.02
SYNE3-203ENST00000554873 HMCESQ96FZ2 354 aa15.18■□□□□ 0.02
SYNE3-203ENST00000554873 B3GALT6Q96L58 329 aa15.18■□□□□ 0.02
SYNE3-203ENST00000554873 IFT46Q9NQC8 304 aa15.18■□□□□ 0.02
SYNE3-203ENST00000554873 SRRDQ9UH36 339 aa15.18■□□□□ 0.02
SYNE3-203ENST00000554873 HAS3O00219 553 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 ARNTLO00327 626 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 CXCR6O00574 342 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 MYL12BO14950 172 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 HOXB3P14651 431 aaPredicted RBP15.17■□□□□ 0.02
SYNE3-203ENST00000554873 MYL12AP19105 171 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 NRIP1P48552 1158 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 PWP1Q13610 501 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 POU4F3Q15319 338 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 UPP1Q16831 310 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 FBXO48Q5FWF7 155 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 ST8SIA4Q92187 359 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 ATOH8Q96SQ7 321 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 RAD9AQ99638 391 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 PITX2Q99697 317 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 BARD1Q99728 777 aaKnown RBP15.17■□□□□ 0.02
SYNE3-203ENST00000554873 TRIM62Q9BVG3 475 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 DCAF13Q9NV06 445 aaKnown RBP15.17■□□□□ 0.02
SYNE3-203ENST00000554873 WASHC1A8K0Z3 465 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 SLC2A3P11169 496 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 SLC19A1P41440 591 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 TPMTP51580 245 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 ALDH6A1Q02252 535 aaKnown RBP15.17■□□□□ 0.02
SYNE3-203ENST00000554873 SEMA3AQ14563 771 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 CLLU1Q5K131 121 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 SAXO2Q658L1 398 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 PROKR1Q8TCW9 393 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 TBC1D20Q96BZ9 403 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 COL21A1Q96P44 957 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 PKMYT1Q99640 499 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.17■□□□□ 0.02
SYNE3-203ENST00000554873 AGO3Q9H9G7 860 aaKnown RBP15.17■□□□□ 0.02
SYNE3-203ENST00000554873 NMUR1Q9HB89 426 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 UXTQ9UBK9 157 aaPredicted RBP15.17■□□□□ 0.02
SYNE3-203ENST00000554873 CPNE7Q9UBL6 633 aa15.17■□□□□ 0.02
SYNE3-203ENST00000554873 ELOVL7A1L3X0 281 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 CRCPO75575 148 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 PAHP00439 452 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 RETP07949 1114 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 CSF3P09919 207 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 EPHA2P29317 976 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 HOXA9P31269 272 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 GPR85P60893 370 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 RRAS2P62070 204 aaPredicted RBP15.16■□□□□ 0.02
SYNE3-203ENST00000554873 S100A12P80511 92 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 LIPIQ6XZB0 460 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 CFAP77Q6ZQR2 320 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 LAX1Q8IWV1 398 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 ENTHD1Q8IYW4 607 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 PLCXD1Q9NUJ7 323 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 MCUBQ9NWR8 336 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 WASH4PA8MWX3 477 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 CD3EAPO15446 510 aaKnown RBP15.16■□□□□ 0.02
SYNE3-203ENST00000554873 PROM1O43490 865 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 TSPAN12O95859 305 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 ATXN1LP0C7T5 689 aaKnown RBP15.16■□□□□ 0.02
SYNE3-203ENST00000554873 RPL17P18621 184 aaKnown RBP15.16■□□□□ 0.02
SYNE3-203ENST00000554873 ERVK-8P63133 956 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 PSPHP78330 225 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 BEX3Q00994 111 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 ZNF273Q14593 569 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 LAPTM4AQ15012 233 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 KLHL12Q53G59 568 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 METTL3Q86U44 580 aaKnown RBP15.16■□□□□ 0.02
SYNE3-203ENST00000554873 UMODL1-AS1Q8N2C9 162 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 OR10A6Q8NH74 314 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 HASPINQ8TF76 798 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 KLHL15Q96M94 604 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 TMEM168Q9H0V1 697 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 IL1RAPQ9NPH3 570 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 SEMA4BQ9NPR2 832 aaPredicted RBP15.16■□□□□ 0.02
SYNE3-203ENST00000554873 TAS2R7Q9NYW3 318 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 ST3GAL5Q9UNP4 418 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms