RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 IGLV3-27P01718 113 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 HOXC8P31273 242 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 ISL1P61371 349 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 CAP1Q01518 475 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 ABHD18Q0P651 414 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 GRIK2Q13002 908 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 CAMK2GQ13555 558 aaPredicted RBP11.48□□□□□ -0.57
XRCC3-208ENST00000554811 VMACQ2NL98 169 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 GATAD2AQ86YP4 633 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 CLSTN3Q9BQT9 956 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 P2RY12Q9H244 342 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 CLMPQ9H6B4 373 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 ZNF334Q9HCZ1 680 aaPredicted RBP11.48□□□□□ -0.57
XRCC3-208ENST00000554811 EHD3Q9NZN3 535 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 TMEM9Q9P0T7 183 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 VPS29Q9UBQ0 182 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 RALGAPA2Q2PPJ7 1873 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 M0QX08 132 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 UGT2B11O75310 529 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 MTA1Q13330 715 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 TOP3AQ13472 1001 aaPredicted RBP11.48□□□□□ -0.57
XRCC3-208ENST00000554811 TIGD6Q17RP2 521 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 ARTNQ5T4W7 220 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 CPZQ66K79 652 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 CFAP206Q8IYR0 622 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 SLC7A5P1Q8MH63 180 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 NAGSQ8N159 534 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 ZNF461Q8TAF7 563 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 ING5Q8WYH8 240 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 HEPHQ9BQS7 1158 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 SORBS1Q9BX66 1292 aaKnown RBP11.48□□□□□ -0.57
XRCC3-208ENST00000554811 SUV39H2Q9H5I1 410 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 CASP8AP2Q9UKL3 1982 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 ANKDD1BA6NHY2 528 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 PLK4O00444 970 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 ANKRD28O15084 1053 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 CA12O43570 354 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 BMP4P12644 408 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 GADD45AP24522 165 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 CLK3P49761 638 aaKnown RBP11.48□□□□□ -0.57
XRCC3-208ENST00000554811 RPS13P62277 151 aaKnown RBP11.48□□□□□ -0.57
XRCC3-208ENST00000554811 MVKQ03426 396 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 ZNF284Q2VY69 593 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 PLEKHG6Q3KR16 790 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 SVOPQ8N4V2 548 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 PDPRQ8NCN5 879 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 NFKBIDQ8NI38 313 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 TMEM203Q969S6 136 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 FOPNLQ96NB1 174 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 C8orf4Q9NR00 106 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 ZDHHC3Q9NYG2 299 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 ENPP5Q9UJA9 477 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 SLC25A13Q9UJS0 675 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 BTBD3Q9Y2F9 522 aa11.48□□□□□ -0.57
XRCC3-208ENST00000554811 ARNTLO00327 626 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 TSPAN6O43657 245 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 CCNDBP1O95273 360 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 DNAJA1P31689 397 aaKnown RBP11.47□□□□□ -0.57
XRCC3-208ENST00000554811 MRPS15P82914 257 aaKnown RBP11.47□□□□□ -0.57
XRCC3-208ENST00000554811 C2orf80Q0P641 193 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 DOC2AQ14183 400 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 CATSPEREQ5SY80 951 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 DEF8Q6ZN54 512 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 TRUB1Q8WWH5 349 aaKnown RBP11.47□□□□□ -0.57
XRCC3-208ENST00000554811 DMRTB1Q96MA1 342 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 CENPOQ9BU64 300 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 HTATIP2Q9BUP3 242 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 KCNH6Q9H252 994 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 TRPC4Q9UBN4 977 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 PCDH7O60245 1069 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 ADAM23O75077 832 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 C6orf47O95873 294 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 INHAP05111 366 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 ALPPL2P10696 532 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 CKMT1AP12532 417 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 PORP16435 677 aaPredicted RBP11.47□□□□□ -0.57
XRCC3-208ENST00000554811 HMGA1P17096 107 aaKnown RBP11.47□□□□□ -0.57
XRCC3-208ENST00000554811 GRK3P35626 688 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 CLDN8P56748 225 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 DUOXA1Q1HG43 343 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 ZNF691Q5VV52 312 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 RSBN1Q5VWQ0 802 aaPredicted RBP11.47□□□□□ -0.57
XRCC3-208ENST00000554811 USP51Q70EK9 711 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 GPR149Q86SP6 731 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 PHF10Q8WUB8 498 aaKnown RBP11.47□□□□□ -0.57
XRCC3-208ENST00000554811 RAB8BQ92930 207 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 CIDECQ96AQ7 238 aaPredicted RBP11.47□□□□□ -0.57
XRCC3-208ENST00000554811 IL17FQ96PD4 163 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 ZNF347Q96SE7 839 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 CPPED1Q9BRF8 314 aaPredicted RBP11.47□□□□□ -0.57
XRCC3-208ENST00000554811 NUAK2Q9H093 628 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 FAM83DQ9H4H8 585 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 HMX1Q9NP08 348 aaPredicted RBP11.47□□□□□ -0.57
XRCC3-208ENST00000554811 DNMT3AQ9Y6K1 912 aaPredicted RBP11.47□□□□□ -0.57
XRCC3-208ENST00000554811 DOCK4Q8N1I0 1966 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 RTCAO00442 366 aaKnown RBP11.47□□□□□ -0.57
XRCC3-208ENST00000554811 F11P03951 625 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 CAPNS1P04632 268 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 LHCGRP22888 699 aa11.47□□□□□ -0.57
XRCC3-208ENST00000554811 ARSIQ5FYB1 569 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms