RNA–Protein interactions for RNA: ENST00000554666.5

PAPOLA-209, Transcript of poly(A) polymerase alpha, human

TSL 2

Gene PAPOLA, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAPOLA-209	ENST00000554666	ZFP36L2	P47974	494 aa	Known RBP	3.33	□□□□□ -1.88
PAPOLA-209	ENST00000554666	LIMK2	P53671	638 aa		3.33	□□□□□ -1.88
PAPOLA-209	ENST00000554666	DCDC1	P59894	354 aa		3.33	□□□□□ -1.88
PAPOLA-209	ENST00000554666	POLR2L	P62875	67 aa	Known RBP	3.33	□□□□□ -1.88
PAPOLA-209	ENST00000554666	GPR139	Q6DWJ6	353 aa		3.33	□□□□□ -1.88
PAPOLA-209	ENST00000554666	CDHR3	Q6ZTQ4	885 aa		3.33	□□□□□ -1.88
PAPOLA-209	ENST00000554666	CENPV	Q7Z7K6	275 aa	Predicted RBP	3.33	□□□□□ -1.88
PAPOLA-209	ENST00000554666	ROBO4	Q8WZ75	1007 aa		3.33	□□□□□ -1.88
PAPOLA-209	ENST00000554666	ATXN7L3B	Q96GX2	97 aa		3.33	□□□□□ -1.88
PAPOLA-209	ENST00000554666	CFAP57	Q96MR6	1250 aa		3.33	□□□□□ -1.88
PAPOLA-209	ENST00000554666	ATF6B	Q99941	703 aa		3.33	□□□□□ -1.88
PAPOLA-209	ENST00000554666	SDCBP2	Q9H190	292 aa		3.33	□□□□□ -1.88
PAPOLA-209	ENST00000554666	ACTL8	Q9H568	366 aa		3.33	□□□□□ -1.88
PAPOLA-209	ENST00000554666	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	3.33	□□□□□ -1.88
PAPOLA-209	ENST00000554666	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	3.33	□□□□□ -1.88
PAPOLA-209	ENST00000554666	TRPV2	Q9Y5S1	764 aa		3.33	□□□□□ -1.88
PAPOLA-209	ENST00000554666	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666		A8MXK9	166 aa		3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	ATP6AP2	O75787	350 aa		3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	STARD3NL	O95772	234 aa		3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	IL4R	P24394	825 aa		3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	ILF2	Q12905	390 aa	Known RBP	3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	ZNF177	Q13360	481 aa	Predicted RBP	3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	TRA2A	Q13595	282 aa	Known RBP eCLIP	3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	TMEM132D	Q14C87	1099 aa		3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	C15orf32	Q32M92	178 aa		3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	BMP2KL	Q5H9B9	411 aa		3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	FGD3	Q5JSP0	725 aa		3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	C6orf163	Q5TEZ5	329 aa		3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	PRSS55	Q6UWB4	352 aa	Predicted RBP	3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	IQCH	Q86VS3	1027 aa		3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	FAM131B	Q86XD5	332 aa		3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	CCDC60	Q8IWA6	550 aa	Predicted RBP	3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	ABHD12	Q8N2K0	398 aa		3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	C11orf45	Q8TAV5	145 aa		3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	PROX1	Q92786	737 aa		3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	TOMM40L	Q969M1	308 aa		3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	C2orf48	Q96LS8	159 aa		3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	FAM218A	Q96MZ4	157 aa		3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	CCDC3	Q9BQI4	270 aa		3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	POLR3GL	Q9BT43	218 aa		3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	PUS3	Q9BZE2	481 aa	Known RBP	3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	GNB4	Q9HAV0	340 aa		3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	GTSE1	Q9NYZ3	720 aa		3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	IL36A	Q9UHA7	158 aa		3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	ZNF510	Q9Y2H8	683 aa		3.32	□□□□□ -1.88
PAPOLA-209	ENST00000554666	NPIPB9	F8W1W9	429 aa		3.31	□□□□□ -1.88
PAPOLA-209	ENST00000554666	AHCYL1	O43865	530 aa		3.31	□□□□□ -1.88
PAPOLA-209	ENST00000554666	NXPH4	O95158	308 aa		3.31	□□□□□ -1.88
PAPOLA-209	ENST00000554666	HOXD4	P09016	255 aa	Predicted RBP	3.31	□□□□□ -1.88
PAPOLA-209	ENST00000554666	MYL6B	P14649	208 aa		3.31	□□□□□ -1.88
PAPOLA-209	ENST00000554666	EDNRA	P25101	427 aa		3.31	□□□□□ -1.88
PAPOLA-209	ENST00000554666	RAB28	P51157	221 aa		3.31	□□□□□ -1.88
PAPOLA-209	ENST00000554666	ERVK-16	P61578	105 aa		3.31	□□□□□ -1.88
PAPOLA-209	ENST00000554666	DLK1	P80370	383 aa		3.31	□□□□□ -1.88
PAPOLA-209	ENST00000554666	SPECC1	Q5M775	1068 aa		3.31	□□□□□ -1.88
PAPOLA-209	ENST00000554666	RBPMS2	Q6ZRY4	209 aa	Known RBP	3.31	□□□□□ -1.88
PAPOLA-209	ENST00000554666	ZBTB49	Q6ZSB9	765 aa		3.31	□□□□□ -1.88
PAPOLA-209	ENST00000554666	SLC24A5	Q71RS6	500 aa		3.31	□□□□□ -1.88
PAPOLA-209	ENST00000554666	FBXL16	Q8N461	479 aa		3.31	□□□□□ -1.88
PAPOLA-209	ENST00000554666	KLHDC1	Q8N7A1	406 aa		3.31	□□□□□ -1.88
PAPOLA-209	ENST00000554666	XXYLT1	Q8NBI6	393 aa		3.31	□□□□□ -1.88
PAPOLA-209	ENST00000554666	CHPT1	Q8WUD6	406 aa		3.31	□□□□□ -1.88
PAPOLA-209	ENST00000554666	KCNE4	Q8WWG9	221 aa		3.31	□□□□□ -1.88
PAPOLA-209	ENST00000554666	TSACC	Q96A04	125 aa	Predicted RBP	3.31	□□□□□ -1.88
PAPOLA-209	ENST00000554666	HDAC11	Q96DB2	347 aa		3.31	□□□□□ -1.88
PAPOLA-209	ENST00000554666	C1orf147	Q96MC9	270 aa	Predicted RBP	3.31	□□□□□ -1.88
PAPOLA-209	ENST00000554666	BTBD9	Q96Q07	612 aa		3.31	□□□□□ -1.88
PAPOLA-209	ENST00000554666	NUDT16L1	Q9BRJ7	211 aa	Known RBP	3.31	□□□□□ -1.88
PAPOLA-209	ENST00000554666	TBC1D7	Q9P0N9	293 aa		3.31	□□□□□ -1.88
PAPOLA-209	ENST00000554666	RNF150	Q9ULK6	438 aa		3.31	□□□□□ -1.88
PAPOLA-209	ENST00000554666	TRBV4-1	A0A0J9YWV2	114 aa		3.3	□□□□□ -1.88
PAPOLA-209	ENST00000554666	NKX6-3	A6NJ46	265 aa		3.3	□□□□□ -1.88
PAPOLA-209	ENST00000554666	RNF103	O00237	685 aa		3.3	□□□□□ -1.88
PAPOLA-209	ENST00000554666	SNAP91	O60641	907 aa		3.3	□□□□□ -1.88
PAPOLA-209	ENST00000554666	CD27	P26842	260 aa		3.3	□□□□□ -1.88
PAPOLA-209	ENST00000554666	HSD17B3	P37058	310 aa		3.3	□□□□□ -1.88
PAPOLA-209	ENST00000554666	DHODH	Q02127	395 aa		3.3	□□□□□ -1.88
PAPOLA-209	ENST00000554666	FCHO2	Q0JRZ9	810 aa		3.3	□□□□□ -1.88
PAPOLA-209	ENST00000554666	RALGDS	Q12967	914 aa		3.3	□□□□□ -1.88
PAPOLA-209	ENST00000554666	CTR9	Q6PD62	1173 aa		3.3	□□□□□ -1.88
PAPOLA-209	ENST00000554666	CNRIP1	Q96F85	164 aa	Predicted RBP	3.3	□□□□□ -1.88
PAPOLA-209	ENST00000554666	PDLIM5	Q96HC4	596 aa	Known RBP	3.3	□□□□□ -1.88
PAPOLA-209	ENST00000554666	CHCHD5	Q9BSY4	110 aa		3.3	□□□□□ -1.88
PAPOLA-209	ENST00000554666	SLC2A11	Q9BYW1	496 aa		3.3	□□□□□ -1.88
PAPOLA-209	ENST00000554666	EGLN3	Q9H6Z9	239 aa		3.3	□□□□□ -1.88
PAPOLA-209	ENST00000554666	HEXA-AS1	Q9H8Q6	139 aa		3.3	□□□□□ -1.88
PAPOLA-209	ENST00000554666	TBC1D13	Q9NVG8	400 aa		3.3	□□□□□ -1.88
PAPOLA-209	ENST00000554666	MYH15	Q9Y2K3	1946 aa		3.3	□□□□□ -1.88
PAPOLA-209	ENST00000554666	TDRD15	B5MCY1	1934 aa	Known RBP	3.29	□□□□□ -1.88
PAPOLA-209	ENST00000554666	NPHP3	Q7Z494	1330 aa		3.29	□□□□□ -1.88
PAPOLA-209	ENST00000554666	IGLV4-3	A0A075B6K6	122 aa		3.29	□□□□□ -1.88
PAPOLA-209	ENST00000554666	POP4	O95707	220 aa	Known RBP	3.29	□□□□□ -1.88
PAPOLA-209	ENST00000554666	BAG3	O95817	575 aa		3.29	□□□□□ -1.88
PAPOLA-209	ENST00000554666	CAPZA2	P47755	286 aa		3.29	□□□□□ -1.88
PAPOLA-209	ENST00000554666	IFI35	P80217	286 aa	Predicted RBP	3.29	□□□□□ -1.88
PAPOLA-209	ENST00000554666	RBPJ	Q06330	500 aa		3.29	□□□□□ -1.88
PAPOLA-209	ENST00000554666	CACNG1	Q06432	222 aa		3.29	□□□□□ -1.88
PAPOLA-209	ENST00000554666	LETM2	Q2VYF4	491 aa		3.29	□□□□□ -1.88
PAPOLA-209	ENST00000554666	ERMARD	Q5T6L9	678 aa		3.29	□□□□□ -1.88

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms