RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 NPIPB15A6NHN6 443 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-207ENST00000553837 FAM25AB3EWG3 89 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 FAM25CB3EWG5 89 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 FAM25GB3EWG6 89 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 CCRL2O00421 344 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 GSTA4O15217 222 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 RGS10O43665 173 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 MED26O95402 600 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 GLUD1P00367 558 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 ITGAMP11215 1152 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 ZNF7P17097 686 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-207ENST00000553837 MAGP20916 626 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 ACRV1P26436 265 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 GTF2E2P29084 291 aaKnown RBP11.88□□□□□ -0.51
SHMT2-207ENST00000553837 HTR3AP46098 478 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 EPHB3P54753 998 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 B2MP61769 119 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 BCL2L1Q07817 233 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 TPRG1LQ5T0D9 272 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 GPRC6AQ5T6X5 926 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 CERS6Q6ZMG9 384 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 B3GNT8Q7Z7M8 397 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 GALNT12Q8IXK2 581 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 SYTL1Q8IYJ3 562 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 UBQLNLQ8IYU4 475 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 MICU2Q8IYU8 434 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 HS3ST5Q8IZT8 346 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 PARP16Q8N5Y8 322 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 DPP10Q8N608 796 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 GPR26Q8NDV2 337 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 FRS2Q8WU20 508 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 RPL3LQ92901 407 aaKnown RBP11.88□□□□□ -0.51
SHMT2-207ENST00000553837 ZNF558Q96NG5 402 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 APOL5Q9BWW9 433 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 REXO4Q9GZR2 422 aaKnown RBP11.88□□□□□ -0.51
SHMT2-207ENST00000553837 RC3H2Q9HBD1 1191 aaKnown RBP11.88□□□□□ -0.51
SHMT2-207ENST00000553837 ACOT13Q9NPJ3 140 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 PAK6Q9NQU5 681 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-207ENST00000553837 CFAP97Q9P2B7 532 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 GPSM3Q9Y4H4 160 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 POLR3HQ9Y535 204 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-207ENST00000553837 MAU2Q9Y6X3 613 aa11.88□□□□□ -0.51
SHMT2-207ENST00000553837 PIKFYVEQ9Y2I7 2098 aa11.87□□□□□ -0.51
SHMT2-207ENST00000553837 FFAR3O14843 346 aa11.87□□□□□ -0.51
SHMT2-207ENST00000553837 GPR42O15529 346 aa11.87□□□□□ -0.51
SHMT2-207ENST00000553837 GABRR2P28476 465 aa11.87□□□□□ -0.51
SHMT2-207ENST00000553837 FMO3P31513 532 aa11.87□□□□□ -0.51
SHMT2-207ENST00000553837 DDOSTP39656 456 aa11.87□□□□□ -0.51
SHMT2-207ENST00000553837 MNX1P50219 401 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-207ENST00000553837 RACK1P63244 317 aaKnown RBP11.87□□□□□ -0.51
SHMT2-207ENST00000553837 PLIN5Q00G26 463 aa11.87□□□□□ -0.51
SHMT2-207ENST00000553837 RAPSNQ13702 412 aa11.87□□□□□ -0.51
SHMT2-207ENST00000553837 KIAA0040Q15053 153 aa11.87□□□□□ -0.51
SHMT2-207ENST00000553837 SMU1Q2TAY7 513 aa11.87□□□□□ -0.51
SHMT2-207ENST00000553837 AP5B1Q2VPB7 878 aa11.87□□□□□ -0.51
SHMT2-207ENST00000553837 CYP20A1Q6UW02 462 aa11.87□□□□□ -0.51
SHMT2-207ENST00000553837 SLC39A5Q6ZMH5 540 aa11.87□□□□□ -0.51
SHMT2-207ENST00000553837 ANKRD33Q7Z3H0 272 aa11.87□□□□□ -0.51
SHMT2-207ENST00000553837 REM2Q8IYK8 340 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-207ENST00000553837 RBFAQ8N0V3 343 aa11.87□□□□□ -0.51
SHMT2-207ENST00000553837 CELF2-AS1Q8N7Q2 184 aa11.87□□□□□ -0.51
SHMT2-207ENST00000553837 SLC47A1Q96FL8 570 aa11.87□□□□□ -0.51
SHMT2-207ENST00000553837 PPM1MQ96MI6 270 aa11.87□□□□□ -0.51
SHMT2-207ENST00000553837 CCDC115Q96NT0 180 aa11.87□□□□□ -0.51
SHMT2-207ENST00000553837 UQCC2Q9BRT2 126 aa11.87□□□□□ -0.51
SHMT2-207ENST00000553837 MKLN1Q9UL63 735 aa11.87□□□□□ -0.51
SHMT2-207ENST00000553837 OARD1Q9Y530 152 aa11.87□□□□□ -0.51
SHMT2-207ENST00000553837 DOCK6Q96HP0 2047 aa11.87□□□□□ -0.51
SHMT2-207ENST00000553837 GLYATL1P3A0A0U1RQE8 302 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 PNMA8CA0A1B0GUJ8 204 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 FAM25EA8MYX2 175 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 FADS2O95864 444 aaKnown RBP11.86□□□□□ -0.51
SHMT2-207ENST00000553837 FTH1P02794 183 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 MT-ND2P03891 347 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 MASP1P48740 699 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 MTPNP58546 118 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 PRKG2Q13237 762 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 PTGR1Q14914 329 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 NR6A1Q15406 480 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 ANKRD34AQ69YU3 496 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 CES5AQ6NT32 575 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 RETSATQ6NUM9 610 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 CRTC1Q6UUV9 634 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 HIPK1Q86Z02 1210 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 ZNF540Q8NDQ6 660 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 SLC38A4Q969I6 547 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 LMLNQ96KR4 655 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 MIR1-1HGQ9H1L0 117 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 ACTR8Q9H981 624 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 MRPL17Q9NRX2 175 aaKnown RBP11.86□□□□□ -0.51
SHMT2-207ENST00000553837 LIMD1Q9UGP4 676 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 GRIP1Q9Y3R0 1128 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 KIAA1671Q9BY89 1806 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 AIREO43918 545 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 FKTNO75072 461 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 URODP06132 367 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 CKMP06732 381 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 ITGALP20701 1170 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 PRKACGP22612 351 aa11.86□□□□□ -0.51
SHMT2-207ENST00000553837 RRM2P31350 389 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms