RNA–Protein interactions for RNA: ENST00000553831.5

PRKCH-207, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-207ENST00000553831 NKG7Q16617 165 aa13.55□□□□□ -0.24
PRKCH-207ENST00000553831 LACTB2Q53H82 288 aaPredicted RBP13.55□□□□□ -0.24
PRKCH-207ENST00000553831 UBAP2Q5T6F2 1119 aaKnown RBP13.55□□□□□ -0.24
PRKCH-207ENST00000553831 GRTP1Q5TC63 336 aa13.55□□□□□ -0.24
PRKCH-207ENST00000553831 PRMT9Q6P2P2 845 aa13.55□□□□□ -0.24
PRKCH-207ENST00000553831 FRA10AC1Q70Z53 315 aa13.55□□□□□ -0.24
PRKCH-207ENST00000553831 VN1R4Q7Z5H5 301 aa13.55□□□□□ -0.24
PRKCH-207ENST00000553831 ZNF605Q86T29 641 aa13.55□□□□□ -0.24
PRKCH-207ENST00000553831 PTRH1Q86Y79 214 aaKnown RBP13.55□□□□□ -0.24
PRKCH-207ENST00000553831 SPATA6LQ8N4H0 392 aa13.55□□□□□ -0.24
PRKCH-207ENST00000553831 ARHGEF39Q8N4T4 335 aa13.55□□□□□ -0.24
PRKCH-207ENST00000553831 SPSB2Q99619 263 aa13.55□□□□□ -0.24
PRKCH-207ENST00000553831 HAUS8Q9BT25 410 aa13.55□□□□□ -0.24
PRKCH-207ENST00000553831 SLC26A1Q9H2B4 701 aa13.55□□□□□ -0.24
PRKCH-207ENST00000553831 WDR54Q9H977 334 aa13.55□□□□□ -0.24
PRKCH-207ENST00000553831 ZNF304Q9HCX3 659 aa13.55□□□□□ -0.24
PRKCH-207ENST00000553831 ACSS2Q9NR19 701 aa13.55□□□□□ -0.24
PRKCH-207ENST00000553831 MTRF1LQ9UGC7 380 aaKnown RBP13.55□□□□□ -0.24
PRKCH-207ENST00000553831 OARD1Q9Y530 152 aa13.55□□□□□ -0.24
PRKCH-207ENST00000553831 HEMK1Q9Y5R4 338 aaPredicted RBP13.55□□□□□ -0.24
PRKCH-207ENST00000553831 MED13Q9UHV7 2174 aa13.55□□□□□ -0.24
PRKCH-207ENST00000553831 CCDC88CQ9P219 2028 aa13.54□□□□□ -0.24
PRKCH-207ENST00000553831 HELZ2Q9BYK8 2649 aaKnown RBP13.54□□□□□ -0.24
PRKCH-207ENST00000553831 FEZF1A0PJY2 475 aa13.54□□□□□ -0.24
PRKCH-207ENST00000553831 K7EM74 188 aa13.54□□□□□ -0.24
PRKCH-207ENST00000553831 CCDC166P0CW27 439 aa13.54□□□□□ -0.24
PRKCH-207ENST00000553831 PLA2G2AP14555 144 aa13.54□□□□□ -0.24
PRKCH-207ENST00000553831 STMN1P16949 149 aa13.54□□□□□ -0.24
PRKCH-207ENST00000553831 FBLP22087 321 aaKnown RBP13.54□□□□□ -0.24
PRKCH-207ENST00000553831 BCL6P41182 706 aa13.54□□□□□ -0.24
PRKCH-207ENST00000553831 CCL11P51671 97 aa13.54□□□□□ -0.24
PRKCH-207ENST00000553831 RAB10P61026 200 aa13.54□□□□□ -0.24
PRKCH-207ENST00000553831 SNRPNP63162 240 aaKnown RBP13.54□□□□□ -0.24
PRKCH-207ENST00000553831 CDKL1Q00532 357 aa13.54□□□□□ -0.24
PRKCH-207ENST00000553831 SLMAPQ14BN4 828 aa13.54□□□□□ -0.24
PRKCH-207ENST00000553831 GARNL3Q5VVW2 1013 aa13.54□□□□□ -0.24
PRKCH-207ENST00000553831 SHISA6Q6ZSJ9 500 aa13.54□□□□□ -0.24
PRKCH-207ENST00000553831 PRICKLE2Q7Z3G6 844 aa13.54□□□□□ -0.24
PRKCH-207ENST00000553831 PPP1R32Q7Z5V6 425 aa13.54□□□□□ -0.24
PRKCH-207ENST00000553831 IFT81Q8WYA0 676 aa13.54□□□□□ -0.24
PRKCH-207ENST00000553831 COL26A1Q96A83 441 aa13.54□□□□□ -0.24
PRKCH-207ENST00000553831 PTERQ96BW5 349 aa13.54□□□□□ -0.24
PRKCH-207ENST00000553831 EGFL8Q99944 293 aa13.54□□□□□ -0.24
PRKCH-207ENST00000553831 FAM129AQ9BZQ8 928 aa13.54□□□□□ -0.24
PRKCH-207ENST00000553831 SOX17Q9H6I2 414 aaPredicted RBP13.54□□□□□ -0.24
PRKCH-207ENST00000553831 NINJ2Q9NZG7 142 aa13.54□□□□□ -0.24
PRKCH-207ENST00000553831 MRPS2Q9Y399 296 aaKnown RBP13.54□□□□□ -0.24
PRKCH-207ENST00000553831 KCNE1BA0A087WTH5 132 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 TXNDC9O14530 226 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 FOXS1O43638 330 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 SLC28A2O43868 658 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 PDGFAP04085 211 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 ANXA5P08758 320 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 CD1DP15813 335 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 ECHS1P30084 290 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 GRK3P35626 688 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 GMPRP36959 345 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 CCR8P51685 355 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 DSG2Q14126 1118 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 C18orf21Q32NC0 220 aaPredicted RBP13.53□□□□□ -0.24
PRKCH-207ENST00000553831 GLE1Q53GS7 698 aaKnown RBP13.53□□□□□ -0.24
PRKCH-207ENST00000553831 CATSPEREQ5SY80 951 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 TCTN3Q6NUS6 607 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 MED25Q71SY5 747 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 CMC1Q7Z7K0 106 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 THOC6Q86W42 341 aaKnown RBP13.53□□□□□ -0.24
PRKCH-207ENST00000553831 CEP112Q8N8E3 955 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 TMEM102Q8N9M5 508 aaPredicted RBP13.53□□□□□ -0.24
PRKCH-207ENST00000553831 ABHD11Q8NFV4 315 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 SLC5A11Q8WWX8 675 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 NEIL2Q969S2 332 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 MRRFQ96E11 262 aaKnown RBP13.53□□□□□ -0.24
PRKCH-207ENST00000553831 THAP11Q96EK4 314 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 MVB12AQ96EY5 273 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 TSNARE1Q96NA8 513 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 IP6K3Q96PC2 410 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 FMO2Q99518 471 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 DRC3Q9H069 523 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 CDC42EP4Q9H3Q1 356 aaKnown RBP13.53□□□□□ -0.24
PRKCH-207ENST00000553831 NXT1Q9UKK6 140 aaKnown RBP13.53□□□□□ -0.24
PRKCH-207ENST00000553831 CDC14AQ9UNH5 594 aa13.53□□□□□ -0.24
PRKCH-207ENST00000553831 GCN1Q92616 2671 aaKnown RBP13.53□□□□□ -0.24
PRKCH-207ENST00000553831 BAHCC1Q9P281 2608 aa13.52□□□□□ -0.24
PRKCH-207ENST00000553831 A0A0A6YYC8 382 aaPredicted RBP13.52□□□□□ -0.25
PRKCH-207ENST00000553831 NCF1BA6NI72 391 aaPredicted RBP13.52□□□□□ -0.25
PRKCH-207ENST00000553831 VSTM2BA6NLU5 285 aa13.52□□□□□ -0.25
PRKCH-207ENST00000553831 NCF1CA8MVU1 366 aaPredicted RBP13.52□□□□□ -0.25
PRKCH-207ENST00000553831 I3L1I5 382 aaPredicted RBP13.52□□□□□ -0.25
PRKCH-207ENST00000553831 PEX12O00623 359 aa13.52□□□□□ -0.25
PRKCH-207ENST00000553831 FFAR3O14843 346 aa13.52□□□□□ -0.25
PRKCH-207ENST00000553831 GPR42O15529 346 aa13.52□□□□□ -0.25
PRKCH-207ENST00000553831 LCMT2O60294 686 aaKnown RBP13.52□□□□□ -0.25
PRKCH-207ENST00000553831 CEACAM4O75871 244 aa13.52□□□□□ -0.25
PRKCH-207ENST00000553831 NCF1P14598 390 aaPredicted RBP13.52□□□□□ -0.25
PRKCH-207ENST00000553831 MMP11P24347 488 aa13.52□□□□□ -0.25
PRKCH-207ENST00000553831 PHBP35232 272 aa13.52□□□□□ -0.25
PRKCH-207ENST00000553831 HNMTP50135 292 aa13.52□□□□□ -0.25
PRKCH-207ENST00000553831 RRADP55042 308 aa13.52□□□□□ -0.25
PRKCH-207ENST00000553831 MEF2AQ02078 507 aaPredicted RBP13.52□□□□□ -0.25
PRKCH-207ENST00000553831 BMPR2Q13873 1038 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms