RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 TEX37Q96LM6 180 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 HHIPQ96QV1 700 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 CGREF1Q99674 301 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 KCTD14Q9BQ13 255 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-221ENST00000553498 SPOCK3Q9BQ16 436 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 ECSITQ9BQ95 431 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 SPATA9Q9BWV2 254 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 ZDHHC5Q9C0B5 715 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 ATG10Q9H0Y0 220 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 TRIT1Q9H3H1 467 aaKnown RBP7.06□□□□□ -1.28
ATXN3-221ENST00000553498 ZNF576Q9H609 170 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 NT5DC2Q9H857 520 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 NANOGQ9H9S0 305 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 PELI2Q9HAT8 420 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 SGK2Q9HBY8 427 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 CCM2LQ9NUG4 571 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-221ENST00000553498 INTS7Q9NVH2 962 aaKnown RBP7.06□□□□□ -1.28
ATXN3-221ENST00000553498 FAM120CQ9NX05 1096 aaKnown RBP7.06□□□□□ -1.28
ATXN3-221ENST00000553498 CMTM6Q9NX76 183 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 FBXL12Q9NXK8 326 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 CLDND1Q9NY35 253 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 GIMAP2Q9UG22 337 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 ZNHIT2Q9UHR6 403 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 CD207Q9UJ71 328 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 RIMS3Q9UJD0 308 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 RAB26Q9ULW5 256 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 ASF1AQ9Y294 204 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 SLC17A4Q9Y2C5 497 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 COQ6Q9Y2Z9 468 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 HEBP2Q9Y5Z4 205 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 GMEB1Q9Y692 573 aa7.06□□□□□ -1.28
ATXN3-221ENST00000553498 ZNF106Q9H2Y7 1883 aaKnown RBP7.06□□□□□ -1.28
ATXN3-221ENST00000553498 ANKRD36A6QL64 1941 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 NUP210Q8TEM1 1887 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-221ENST00000553498 A0A1W2PPC1 479 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 DHRS12A0PJE2 317 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 E7EQ34 232 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 SORBS2O94875 1100 aaKnown RBP7.05□□□□□ -1.28
ATXN3-221ENST00000553498 SEMA3DO95025 777 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 PCCBP05166 539 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 ACADMP11310 421 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 HOXB2P14652 356 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 NPPBP16860 134 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 IL1RNP18510 177 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 PPIBP23284 216 aaKnown RBP7.05□□□□□ -1.28
ATXN3-221ENST00000553498 HRH2P25021 359 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 PTX3P26022 381 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-221ENST00000553498 NDUFS1P28331 727 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 IL12AP29459 219 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 PDHA2P29803 388 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 LTBRP36941 435 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 HPCAL1P37235 193 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 KIR3DL1P43629 444 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 BDKRB1P46663 353 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 GSK3BP49841 420 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 CLCNKAP51800 687 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 GTF2A1P52655 376 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-221ENST00000553498 ARFIP1P53367 373 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 KIAA1024LP59773 190 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 TBPL1P62380 186 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 MRPS22P82650 360 aaKnown RBP7.05□□□□□ -1.28
ATXN3-221ENST00000553498 LIPEQ05469 1076 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 ACSM2AQ08AH3 577 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 FAM174BQ3ZCQ3 159 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 SGO1Q5FBB7 561 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 PERM1Q5SV97 790 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 ZNF648Q5T619 568 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-221ENST00000553498 ACSM2BQ68CK6 577 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 CAPRIN2Q6IMN6 1127 aaKnown RBP7.05□□□□□ -1.28
ATXN3-221ENST00000553498 NOXRED1Q6NXP6 359 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 NXPE4Q6UWF7 544 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 LAYNQ6UX15 382 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 IZUMO2Q6UXV1 221 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 IKBIPQ70UQ0 350 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 GPR180Q86V85 440 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 CD163Q86VB7 1156 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 ATCAYQ86WG3 371 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 TRIM69Q86WT6 500 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 SYT12Q8IV01 421 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 SFTPA1Q8IWL2 248 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 LRRC56Q8IYG6 542 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-221ENST00000553498 KIAA2013Q8IYS2 634 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 TMEM132CQ8N3T6 1108 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 RNF148Q8N7C7 305 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 IL17RCQ8NAC3 791 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 PLA2G15Q8NCC3 412 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 PAPD5Q8NDF8 572 aaKnown RBP7.05□□□□□ -1.28
ATXN3-221ENST00000553498 HIPK4Q8NE63 616 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 TTLQ8NG68 377 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 OR7G3Q8NG95 312 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 NUDT8Q8WV74 236 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 SMPDL3AQ92484 453 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 GTF2H4Q92759 462 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 VPS33AQ96AX1 596 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 PYCR2Q96C36 320 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 MTERF3Q96E29 417 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 SIPA1Q96FS4 1042 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 ABHD8Q96I13 439 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 ZNF570Q96NI8 536 aa7.05□□□□□ -1.28
ATXN3-221ENST00000553498 TMEM74Q96NL1 305 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms