RNA–Protein interactions for RNA: ENST00000553331.5

PNN-202, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3 BASIC

Gene PNN, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-202ENST00000553331 AGTRAPQ6RW13 159 aa17.05■□□□□ 0.32
PNN-202ENST00000553331 LAPTM4BQ86VI4 370 aa17.05■□□□□ 0.32
PNN-202ENST00000553331 OR11G2Q8NGC1 345 aa17.05■□□□□ 0.32
PNN-202ENST00000553331 NACC2Q96BF6 587 aa17.05■□□□□ 0.32
PNN-202ENST00000553331 THOC3Q96J01 351 aaKnown RBP17.05■□□□□ 0.32
PNN-202ENST00000553331 VPS50Q96JG6 964 aa17.05■□□□□ 0.32
PNN-202ENST00000553331 HIST1H2AHQ96KK5 128 aa17.05■□□□□ 0.32
PNN-202ENST00000553331 HIST1H2AJQ99878 128 aa17.05■□□□□ 0.32
PNN-202ENST00000553331 MACROD1Q9BQ69 325 aa17.05■□□□□ 0.32
PNN-202ENST00000553331 H2AFJQ9BTM1 129 aa17.05■□□□□ 0.32
PNN-202ENST00000553331 TMEM184CQ9NVA4 438 aa17.05■□□□□ 0.32
PNN-202ENST00000553331 SH2B3Q9UQQ2 575 aa17.05■□□□□ 0.32
PNN-202ENST00000553331 TEX264Q9Y6I9 313 aa17.05■□□□□ 0.32
PNN-202ENST00000553331 DOCK10Q96BY6 2186 aa17.05■□□□□ 0.32
PNN-202ENST00000553331 FEZF1A0PJY2 475 aa17.04■□□□□ 0.32
PNN-202ENST00000553331 TXNDC9O14530 226 aa17.04■□□□□ 0.32
PNN-202ENST00000553331 MAP2K7O14733 419 aa17.04■□□□□ 0.32
PNN-202ENST00000553331 PRPF4O43172 522 aaKnown RBP eCLIP17.04■□□□□ 0.325e-7■□□□□ 8.9
PNN-202ENST00000553331 ACPPP15309 386 aa17.04■□□□□ 0.32
PNN-202ENST00000553331 EMP2P54851 167 aa17.04■□□□□ 0.32
PNN-202ENST00000553331 EMP3P54852 163 aa17.04■□□□□ 0.32
PNN-202ENST00000553331 MAT1AQ00266 395 aaKnown RBP17.04■□□□□ 0.32
PNN-202ENST00000553331 CBLBQ13191 982 aa17.04■□□□□ 0.32
PNN-202ENST00000553331 SP140Q13342 867 aa17.04■□□□□ 0.32
PNN-202ENST00000553331 DSG2Q14126 1118 aa17.04■□□□□ 0.32
PNN-202ENST00000553331 PHKG1Q16816 387 aa17.04■□□□□ 0.32
PNN-202ENST00000553331 SYT16Q17RD7 645 aa17.04■□□□□ 0.32
PNN-202ENST00000553331 GARNL3Q5VVW2 1013 aa17.04■□□□□ 0.32
PNN-202ENST00000553331 CAPN12Q6ZSI9 719 aa17.04■□□□□ 0.32
PNN-202ENST00000553331 C17orf64Q86WR6 236 aa17.04■□□□□ 0.32
PNN-202ENST00000553331 TM9SF4Q92544 642 aa17.04■□□□□ 0.32
PNN-202ENST00000553331 C19orf60Q96EN9 201 aa17.04■□□□□ 0.32
PNN-202ENST00000553331 OLFM1Q99784 485 aa17.04■□□□□ 0.32
PNN-202ENST00000553331 DRC3Q9H069 523 aa17.04■□□□□ 0.32
PNN-202ENST00000553331 ZNF160Q9HCG1 818 aa17.04■□□□□ 0.32
PNN-202ENST00000553331 ARL15Q9NXU5 204 aa17.04■□□□□ 0.32
PNN-202ENST00000553331 GRHL1Q9NZI5 618 aa17.04■□□□□ 0.32
PNN-202ENST00000553331 B3GNT3Q9Y2A9 372 aa17.04■□□□□ 0.32
PNN-202ENST00000553331 VWA7Q9Y334 891 aa17.04■□□□□ 0.32
PNN-202ENST00000553331 MRPS2Q9Y399 296 aaKnown RBP17.04■□□□□ 0.32
PNN-202ENST00000553331 NBASA2RRP1 2371 aa17.04■□□□□ 0.32
PNN-202ENST00000553331 SCN3AQ9NY46 2000 aa17.04■□□□□ 0.32
PNN-202ENST00000553331 SPENQ96T58 3664 aaKnown RBP17.03■□□□□ 0.32
PNN-202ENST00000553331 SLC16A5O15375 505 aa17.03■□□□□ 0.32
PNN-202ENST00000553331 FOXS1O43638 330 aa17.03■□□□□ 0.32
PNN-202ENST00000553331 GUCA1CO95843 209 aa17.03■□□□□ 0.32
PNN-202ENST00000553331 HEXBP07686 556 aa17.03■□□□□ 0.32
PNN-202ENST00000553331 CDH1P12830 882 aa17.03■□□□□ 0.32
PNN-202ENST00000553331 GLRBP48167 497 aa17.03■□□□□ 0.32
PNN-202ENST00000553331 SOX8P57073 446 aa17.03■□□□□ 0.32
PNN-202ENST00000553331 EEF1A2Q05639 463 aaKnown RBP17.03■□□□□ 0.32
PNN-202ENST00000553331 FASTKD3Q14CZ7 662 aaKnown RBP17.03■□□□□ 0.32
PNN-202ENST00000553331 NDUFA9Q16795 377 aa17.03■□□□□ 0.32
PNN-202ENST00000553331 AGAP7PQ5VUJ5 663 aa17.03■□□□□ 0.32
PNN-202ENST00000553331 STEAP4Q687X5 459 aa17.03■□□□□ 0.32
PNN-202ENST00000553331 FAM45BPQ6NSW5 357 aa17.03■□□□□ 0.32
PNN-202ENST00000553331 FAM26EQ8N5C1 309 aa17.03■□□□□ 0.32
PNN-202ENST00000553331 CISD2Q8N5K1 135 aaKnown RBP17.03■□□□□ 0.32
PNN-202ENST00000553331 AMER3Q8N944 861 aa17.03■□□□□ 0.32
PNN-202ENST00000553331 GALNT11Q8NCW6 608 aa17.03■□□□□ 0.32
PNN-202ENST00000553331 FBXO36Q8NEA4 188 aa17.03■□□□□ 0.32
PNN-202ENST00000553331 FAM45AQ8TCE6 357 aa17.03■□□□□ 0.32
PNN-202ENST00000553331 LRRC39Q96DD0 335 aa17.03■□□□□ 0.32
PNN-202ENST00000553331 MVB12AQ96EY5 273 aa17.03■□□□□ 0.32
PNN-202ENST00000553331 AGAP4Q96P64 663 aa17.03■□□□□ 0.32
PNN-202ENST00000553331 PCBD2Q9H0N5 130 aa17.03■□□□□ 0.32
PNN-202ENST00000553331 DPH5Q9H2P9 285 aa17.03■□□□□ 0.32
PNN-202ENST00000553331 WHRNQ9P202 907 aa17.03■□□□□ 0.32
PNN-202ENST00000553331 ZFATQ9P243 1243 aa17.03■□□□□ 0.32
PNN-202ENST00000553331 SHANK1Q9Y566 2161 aa17.02■□□□□ 0.32
PNN-202ENST00000553331 IDSB3KWA1 339 aa17.02■□□□□ 0.32
PNN-202ENST00000553331 E7ESA3 106 aa17.02■□□□□ 0.32
PNN-202ENST00000553331 FDXRP22570 491 aa17.02■□□□□ 0.32
PNN-202ENST00000553331 HRH2P25021 359 aa17.02■□□□□ 0.32
PNN-202ENST00000553331 CXCR2P25025 360 aa17.02■□□□□ 0.32
PNN-202ENST00000553331 SLC26A3P40879 764 aa17.02■□□□□ 0.32
PNN-202ENST00000553331 AVPR1BP47901 424 aa17.02■□□□□ 0.32
PNN-202ENST00000553331 RPS15AP62244 130 aaKnown RBP17.02■□□□□ 0.32
PNN-202ENST00000553331 SNRPNP63162 240 aaKnown RBP17.02■□□□□ 0.32
PNN-202ENST00000553331 CSNK1G2P78368 415 aa17.02■□□□□ 0.32
PNN-202ENST00000553331 SRSF1Q07955 248 aaKnown RBP eCLIP17.02■□□□□ 0.32
PNN-202ENST00000553331 Q0VFX4 171 aa17.02■□□□□ 0.32
PNN-202ENST00000553331 MFSD4BQ5TF39 518 aa17.02■□□□□ 0.32
PNN-202ENST00000553331 STRA8Q7Z7C7 330 aa17.02■□□□□ 0.32
PNN-202ENST00000553331 GALNT7Q86SF2 657 aa17.02■□□□□ 0.32
PNN-202ENST00000553331 IQCKQ8N0W5 287 aa17.02■□□□□ 0.32
PNN-202ENST00000553331 BBOF1Q8ND07 529 aa17.02■□□□□ 0.32
PNN-202ENST00000553331 OR9A4Q8NGU2 314 aa17.02■□□□□ 0.32
PNN-202ENST00000553331 ZCCHC10Q8TBK6 192 aa17.02■□□□□ 0.32
PNN-202ENST00000553331 PYCR2Q96C36 320 aa17.02■□□□□ 0.32
PNN-202ENST00000553331 CNDP1Q96KN2 507 aa17.02■□□□□ 0.32
PNN-202ENST00000553331 TRIM54Q9BYV2 358 aa17.02■□□□□ 0.32
PNN-202ENST00000553331 LHPPQ9H008 270 aa17.02■□□□□ 0.32
PNN-202ENST00000553331 MKKSQ9NPJ1 570 aaPredicted RBP17.02■□□□□ 0.32
PNN-202ENST00000553331 CSAG2Q9Y5P2 127 aa17.02■□□□□ 0.32
PNN-202ENST00000553331 PSAT1Q9Y617 370 aa17.02■□□□□ 0.32
PNN-202ENST00000553331 UBR5O95071 2799 aaPredicted RBP17.01■□□□□ 0.31
PNN-202ENST00000553331 IGLV3-12A0A075B6K2 115 aa17.01■□□□□ 0.31
PNN-202ENST00000553331 NSG1A0A0A6YYJ2 146 aa17.01■□□□□ 0.31
PNN-202ENST00000553331 NDC80O14777 642 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms