RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 ALPPL2P10696 532 aa4.61□□□□□ -1.67
SCFD1-209ENST00000553280 CA6P23280 308 aa4.61□□□□□ -1.67
SCFD1-209ENST00000553280 DUTP33316 252 aaKnown RBP4.61□□□□□ -1.67
SCFD1-209ENST00000553280 ZNF132P52740 706 aa4.61□□□□□ -1.67
SCFD1-209ENST00000553280 DMP1Q13316 513 aaPredicted RBP4.61□□□□□ -1.67
SCFD1-209ENST00000553280 TRA2AQ13595 282 aaKnown RBP eCLIP4.61□□□□□ -1.67
SCFD1-209ENST00000553280 PDK1Q15118 436 aa4.61□□□□□ -1.67
SCFD1-209ENST00000553280 DNAJC21Q5F1R6 531 aaKnown RBP4.61□□□□□ -1.67
SCFD1-209ENST00000553280 XKR3Q5GH77 459 aa4.61□□□□□ -1.67
SCFD1-209ENST00000553280 AWAT2Q6E213 333 aa4.61□□□□□ -1.67
SCFD1-209ENST00000553280 CTR9Q6PD62 1173 aa4.61□□□□□ -1.67
SCFD1-209ENST00000553280 C16orf82Q7Z2V1 217 aa4.61□□□□□ -1.67
SCFD1-209ENST00000553280 ARMC9Q7Z3E5 817 aa4.61□□□□□ -1.67
SCFD1-209ENST00000553280 PRUNE1Q86TP1 453 aa4.61□□□□□ -1.67
SCFD1-209ENST00000553280 SPATA2LQ8IUW3 424 aaPredicted RBP4.61□□□□□ -1.67
SCFD1-209ENST00000553280 CROCCP3Q8IVE0 287 aa4.61□□□□□ -1.67
SCFD1-209ENST00000553280 LMNTD1Q8N9Z9 388 aa4.61□□□□□ -1.67
SCFD1-209ENST00000553280 KIAA1524Q8TCG1 905 aa4.61□□□□□ -1.67
SCFD1-209ENST00000553280 TAF4BQ92750 862 aa4.61□□□□□ -1.67
SCFD1-209ENST00000553280 ZNF479Q96JC4 524 aa4.61□□□□□ -1.67
SCFD1-209ENST00000553280 ZNF560Q96MR9 790 aa4.61□□□□□ -1.67
SCFD1-209ENST00000553280 IL17FQ96PD4 163 aa4.61□□□□□ -1.67
SCFD1-209ENST00000553280 DUX5Q96PT3 197 aa4.61□□□□□ -1.67
SCFD1-209ENST00000553280 NAP1L3Q99457 506 aaPredicted RBP4.61□□□□□ -1.67
SCFD1-209ENST00000553280 PRMT1Q99873 361 aaKnown RBP4.61□□□□□ -1.67
SCFD1-209ENST00000553280 OR2B2Q9GZK3 357 aa4.61□□□□□ -1.67
SCFD1-209ENST00000553280 HSD3B7Q9H2F3 369 aa4.61□□□□□ -1.67
SCFD1-209ENST00000553280 DDX31Q9H8H2 851 aaKnown RBP4.61□□□□□ -1.67
SCFD1-209ENST00000553280 CHST11Q9NPF2 352 aa4.61□□□□□ -1.67
SCFD1-209ENST00000553280 FAM207AQ9NSI2 230 aaPredicted RBP4.61□□□□□ -1.67
SCFD1-209ENST00000553280 AGTPBP1Q9UPW5 1226 aa4.61□□□□□ -1.67
SCFD1-209ENST00000553280 PIN4Q9Y237 131 aaKnown RBP4.61□□□□□ -1.67
SCFD1-209ENST00000553280 EXOC6BQ9Y2D4 811 aa4.61□□□□□ -1.67
SCFD1-209ENST00000553280 ZNF510Q9Y2H8 683 aa4.61□□□□□ -1.67
SCFD1-209ENST00000553280 STRAPQ9Y3F4 350 aaKnown RBP4.61□□□□□ -1.67
SCFD1-209ENST00000553280 TRBV2A0A0J9YWF9 115 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 ANKDD1BA6NHY2 528 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 ZNF197O14709 1029 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 ACSL4O60488 711 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 BAG3O95817 575 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 NGFRP08138 427 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 CD59P13987 128 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 NR1D1P20393 614 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 AHCYP23526 432 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 DGKAP23743 735 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 ELAVL4P26378 380 aaKnown RBP4.6□□□□□ -1.67
SCFD1-209ENST00000553280 SFTPDP35247 375 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 CETN2P41208 172 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 CDKN2AP42771 156 aaKnown RBP4.6□□□□□ -1.67
SCFD1-209ENST00000553280 FMO5P49326 533 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 SMSP52788 366 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 ATXN3P54252 364 aaPredicted RBP4.6□□□□□ -1.67
SCFD1-209ENST00000553280 ABRQ12979 859 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 TSTA3Q13630 321 aaPredicted RBP4.6□□□□□ -1.67
SCFD1-209ENST00000553280 HERC3Q15034 1050 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 CCNYL2Q5T2Q4 361 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 C20orf194Q5TEA3 1177 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 TTC27Q6P3X3 843 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 ANO5Q75V66 913 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 TMEM126BQ8IUX1 230 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 CCDC60Q8IWA6 550 aaPredicted RBP4.6□□□□□ -1.67
SCFD1-209ENST00000553280 LAX1Q8IWV1 398 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 PRSS35Q8N3Z0 413 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 DNAJC22Q8N4W6 341 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 METTL27Q8N6F8 245 aaPredicted RBP4.6□□□□□ -1.67
SCFD1-209ENST00000553280 IGSF21Q96ID5 467 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 PKP2Q99959 881 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 EVA1AQ9H8M9 152 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 SYTL2Q9HCH5 934 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 MIS18AQ9NYP9 233 aa4.6□□□□□ -1.67
SCFD1-209ENST00000553280 FOXA2Q9Y261 457 aaPredicted RBP4.6□□□□□ -1.67
SCFD1-209ENST00000553280 PRAC2D3DTV9 90 aa4.59□□□□□ -1.67
SCFD1-209ENST00000553280 PRKNO60260 465 aaPredicted RBP4.59□□□□□ -1.67
SCFD1-209ENST00000553280 REC8O95072 547 aa4.59□□□□□ -1.67
SCFD1-209ENST00000553280 CCNA2P20248 432 aa4.59□□□□□ -1.67
SCFD1-209ENST00000553280 ALDH1B1P30837 517 aa4.59□□□□□ -1.67
SCFD1-209ENST00000553280 GAS1P54826 345 aa4.59□□□□□ -1.67
SCFD1-209ENST00000553280 EVCP57679 992 aa4.59□□□□□ -1.67
SCFD1-209ENST00000553280 HERV-K104P61576 105 aa4.59□□□□□ -1.67
SCFD1-209ENST00000553280 GAMTQ14353 236 aa4.59□□□□□ -1.67
SCFD1-209ENST00000553280 OPCMLQ14982 345 aa4.59□□□□□ -1.67
SCFD1-209ENST00000553280 TAF13Q15543 124 aa4.59□□□□□ -1.67
SCFD1-209ENST00000553280 PDLIM3Q53GG5 364 aaPredicted RBP4.59□□□□□ -1.67
SCFD1-209ENST00000553280 NEK5Q6P3R8 708 aa4.59□□□□□ -1.67
SCFD1-209ENST00000553280 SIGLEC15Q6ZMC9 328 aa4.59□□□□□ -1.67
SCFD1-209ENST00000553280 RCOR2Q8IZ40 523 aa4.59□□□□□ -1.67
SCFD1-209ENST00000553280 CNNM3Q8NE01 707 aa4.59□□□□□ -1.67
SCFD1-209ENST00000553280 EXOC6Q8TAG9 804 aa4.59□□□□□ -1.67
SCFD1-209ENST00000553280 SAP25Q8TEE9 199 aa4.59□□□□□ -1.67
SCFD1-209ENST00000553280 PRCCQ92733 491 aaPredicted RBP4.59□□□□□ -1.67
SCFD1-209ENST00000553280 EVPLQ92817 2033 aa4.59□□□□□ -1.67
SCFD1-209ENST00000553280 FAM46BQ96A09 425 aa4.59□□□□□ -1.67
SCFD1-209ENST00000553280 TMEM186Q96B77 213 aa4.59□□□□□ -1.67
SCFD1-209ENST00000553280 NSL1Q96IY1 281 aa4.59□□□□□ -1.67
SCFD1-209ENST00000553280 SPATA13Q96N96 652 aa4.59□□□□□ -1.67
SCFD1-209ENST00000553280 ALKBH7Q9BT30 221 aaPredicted RBP4.59□□□□□ -1.67
SCFD1-209ENST00000553280 CPVLQ9H3G5 476 aa4.59□□□□□ -1.67
SCFD1-209ENST00000553280 RAVER2Q9HCJ3 691 aaKnown RBP4.59□□□□□ -1.67
SCFD1-209ENST00000553280 ECHDC1Q9NTX5 307 aa4.59□□□□□ -1.67
SCFD1-209ENST00000553280 HPF1Q9NWY4 346 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms