RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 RHEBL1Q8TAI7 183 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 MZB1Q8WU39 189 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 SLC5A11Q8WWX8 675 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 CAVIN3Q969G5 261 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 KIAA1143Q96AT1 154 aaPredicted RBP13.49□□□□□ -0.25
PTCH1-226ENST00000553011 MTBPQ96DY7 904 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 GBP5Q96PP8 586 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 NDC1Q9BTX1 674 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 CHST8Q9H2A9 424 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 SPNS1Q9H2V7 528 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 CUTCQ9NTM9 273 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 RAB21Q9UL25 225 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 SRPK3Q9UPE1 567 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 DYRK1BQ9Y463 629 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 MRPS18BQ9Y676 258 aaKnown RBP13.49□□□□□ -0.25
PTCH1-226ENST00000553011 MED13Q9UHV7 2174 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 IGSF10Q6WRI0 2623 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 ATRXP46100 2492 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 PIEZO2Q9H5I5 2752 aa13.49□□□□□ -0.25
PTCH1-226ENST00000553011 NBEAQ8NFP9 2946 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 HYKKA2RU49 373 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 FITM1A5D6W6 292 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 GOLGA8RI6L899 631 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 TERTO14746 1132 aaKnown RBP13.48□□□□□ -0.25
PTCH1-226ENST00000553011 LCMT2O60294 686 aaKnown RBP13.48□□□□□ -0.25
PTCH1-226ENST00000553011 STK16O75716 305 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 IPO13O94829 963 aaKnown RBP13.48□□□□□ -0.25
PTCH1-226ENST00000553011 KLK3P07288 261 aaPredicted RBP13.48□□□□□ -0.25
PTCH1-226ENST00000553011 COL6A2P12110 1019 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 BCL6P41182 706 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 AGTR2P50052 363 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 CCR8P51685 355 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 RPS15AP62244 130 aaKnown RBP13.48□□□□□ -0.25
PTCH1-226ENST00000553011 VAC14Q08AM6 782 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 DNASE1L3Q13609 305 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 HKDC1Q2TB90 917 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 PRTGQ2VWP7 1150 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 NXPE4Q6UWF7 544 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 ZNF517Q6ZMY9 492 aaPredicted RBP13.48□□□□□ -0.25
PTCH1-226ENST00000553011 TTLL10Q6ZVT0 673 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 VN1R4Q7Z5H5 301 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 TMPRSS11BQ86T26 416 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 CYP4X1Q8N118 509 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 CSNK1A1LQ8N752 337 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 ZNF740Q8NDX6 193 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 OR4K1Q8NGD4 311 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 RERGQ96A58 199 aaPredicted RBP13.48□□□□□ -0.25
PTCH1-226ENST00000553011 SCYL1Q96KG9 808 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 CNOT10Q9H9A5 744 aaKnown RBP13.48□□□□□ -0.25
PTCH1-226ENST00000553011 ENAMQ9NRM1 1142 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 TXLNGQ9NUQ3 528 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 DNAJC11Q9NVH1 559 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 CPSF2Q9P2I0 782 aaKnown RBP13.48□□□□□ -0.25
PTCH1-226ENST00000553011 XPR1Q9UBH6 696 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 NDOR1Q9UHB4 597 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 PCDHGA4Q9Y5G9 962 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 KCNE2Q9Y6J6 123 aa13.48□□□□□ -0.25
PTCH1-226ENST00000553011 A0A1W2PPM1 405 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 CCDC189A1A4V9 331 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 SYCE1LA8MT33 242 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 K7ENP7 123 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 MAP2K7O14733 419 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 CCNT2O60583 730 aaKnown RBP13.47□□□□□ -0.25
PTCH1-226ENST00000553011 KATNA1O75449 491 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 CAPN1P07384 714 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 RBP1P09455 135 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 GFAPP14136 432 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 ITGAXP20702 1163 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 ALAS2P22557 587 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 VARSP26640 1264 aaKnown RBP13.47□□□□□ -0.25
PTCH1-226ENST00000553011 ARSFP54793 590 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 NFKB2Q00653 900 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 REEP5Q00765 189 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 CDC16Q13042 620 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 SLC9A5Q14940 896 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 PFKFB4Q16877 469 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 TSNAXIP1Q2TAA8 658 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 INO80CQ6PI98 192 aaPredicted RBP13.47□□□□□ -0.25
PTCH1-226ENST00000553011 FAM198BQ6UWH4 519 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 TDRPQ86YL5 185 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 METTL27Q8N6F8 245 aaPredicted RBP13.47□□□□□ -0.25
PTCH1-226ENST00000553011 SNX31Q8N9S9 440 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 PROKR1Q8TCW9 393 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 UBTD2Q8WUN7 234 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 CABS1Q96KC9 395 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 C10orf90Q96M02 699 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 MACROD1Q9BQ69 325 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 CD244Q9BZW8 370 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 PRORYQ9H606 182 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 PELI2Q9HAT8 420 aa13.47□□□□□ -0.25
PTCH1-226ENST00000553011 RUVBL1Q9Y265 456 aaKnown RBP13.47□□□□□ -0.25
PTCH1-226ENST00000553011 A0A1B0GX78 115 aa13.46□□□□□ -0.25
PTCH1-226ENST00000553011 TRBC2A0A5B9 178 aa13.46□□□□□ -0.25
PTCH1-226ENST00000553011 TLDC2A0PJX2 215 aa13.46□□□□□ -0.25
PTCH1-226ENST00000553011 LRRC14BA6NHZ5 514 aa13.46□□□□□ -0.25
PTCH1-226ENST00000553011 C21orf140B9A014 251 aa13.46□□□□□ -0.25
PTCH1-226ENST00000553011 TK2O00142 265 aa13.46□□□□□ -0.25
PTCH1-226ENST00000553011 DSCR3O14972 297 aa13.46□□□□□ -0.25
PTCH1-226ENST00000553011 OR1F1O43749 312 aa13.46□□□□□ -0.25
PTCH1-226ENST00000553011 KLK8O60259 260 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms