RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 ATP6V1G2O95670 118 aa12.2□□□□□ -0.46
CACNB3-223ENST00000552480 CSF2P04141 144 aa12.2□□□□□ -0.46
CACNB3-223ENST00000552480 CELA2BP08218 269 aaPredicted RBP12.2□□□□□ -0.46
CACNB3-223ENST00000552480 CHRM5P08912 532 aaPredicted RBP12.2□□□□□ -0.46
CACNB3-223ENST00000552480 NME1P15531 152 aaKnown RBP12.2□□□□□ -0.46
CACNB3-223ENST00000552480 JUNDP17535 347 aa12.2□□□□□ -0.46
CACNB3-223ENST00000552480 HRH2P25021 359 aa12.2□□□□□ -0.46
CACNB3-223ENST00000552480 PEBP1P30086 187 aaKnown RBP12.2□□□□□ -0.46
CACNB3-223ENST00000552480 CLDN8P56748 225 aa12.2□□□□□ -0.46
CACNB3-223ENST00000552480 UBE2IP63279 158 aaKnown RBP12.2□□□□□ -0.46
CACNB3-223ENST00000552480 YBX1P67809 324 aaKnown RBP12.2□□□□□ -0.46
CACNB3-223ENST00000552480 FOXM1Q08050 763 aa12.2□□□□□ -0.46
CACNB3-223ENST00000552480 DMWDQ09019 674 aa12.2□□□□□ -0.46
CACNB3-223ENST00000552480 RBBP5Q15291 538 aaKnown RBP12.2□□□□□ -0.46
CACNB3-223ENST00000552480 TLR1Q15399 786 aa12.2□□□□□ -0.46
CACNB3-223ENST00000552480 ZNF423Q2M1K9 1284 aa12.2□□□□□ -0.46
CACNB3-223ENST00000552480 WDR45BQ5MNZ6 344 aa12.2□□□□□ -0.46
CACNB3-223ENST00000552480 PRMT9Q6P2P2 845 aa12.2□□□□□ -0.46
CACNB3-223ENST00000552480 VN1R5Q7Z5H4 357 aa12.2□□□□□ -0.46
CACNB3-223ENST00000552480 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.2□□□□□ -0.46
CACNB3-223ENST00000552480 C1orf52Q8N6N3 182 aaKnown RBP12.2□□□□□ -0.46
CACNB3-223ENST00000552480 C1orf216Q8TAB5 229 aa12.2□□□□□ -0.46
CACNB3-223ENST00000552480 JPH3Q8WXH2 748 aaPredicted RBP12.2□□□□□ -0.46
CACNB3-223ENST00000552480 DNASE2BQ8WZ79 361 aa12.2□□□□□ -0.46
CACNB3-223ENST00000552480 VPS33AQ96AX1 596 aa12.2□□□□□ -0.46
CACNB3-223ENST00000552480 C11orf24Q96F05 449 aaPredicted RBP12.2□□□□□ -0.46
CACNB3-223ENST00000552480 CDRT15Q96T59 188 aa12.2□□□□□ -0.46
CACNB3-223ENST00000552480 HOPXQ9BPY8 73 aaPredicted RBP12.2□□□□□ -0.46
CACNB3-223ENST00000552480 LRRC61Q9BV99 259 aa12.2□□□□□ -0.46
CACNB3-223ENST00000552480 TWSG1Q9GZX9 223 aa12.2□□□□□ -0.46
CACNB3-223ENST00000552480 MIR1-1HGQ9H1L0 117 aa12.2□□□□□ -0.46
CACNB3-223ENST00000552480 DUSP15Q9H1R2 295 aaPredicted RBP12.2□□□□□ -0.46
CACNB3-223ENST00000552480 RASSF4Q9H2L5 321 aa12.2□□□□□ -0.46
CACNB3-223ENST00000552480 MRPS30Q9NP92 439 aaKnown RBP12.2□□□□□ -0.46
CACNB3-223ENST00000552480 PRMT8Q9NR22 394 aaPredicted RBP12.2□□□□□ -0.46
CACNB3-223ENST00000552480 TMEM184CQ9NVA4 438 aa12.2□□□□□ -0.46
CACNB3-223ENST00000552480 MAP10Q9P2G4 905 aa12.2□□□□□ -0.46
CACNB3-223ENST00000552480 BAIAP2L1Q9UHR4 511 aa12.2□□□□□ -0.46
CACNB3-223ENST00000552480 TRBV23OR9-2A0A075B6M9 112 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 TRBC2A0A5B9 178 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 FAM221BA6H8Z2 402 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 ANKDD1BA6NHY2 528 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 H7BY64 318 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 PRMT3O60678 531 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 PDGFBP01127 241 aaPredicted RBP12.19□□□□□ -0.46
CACNB3-223ENST00000552480 NPPAP01160 153 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 VIPP01282 170 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 IL6P05231 212 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 TACR1P25103 407 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 PTX3P26022 381 aaPredicted RBP12.19□□□□□ -0.46
CACNB3-223ENST00000552480 MAOBP27338 520 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 CMPK1P30085 196 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 TIA1P31483 386 aaKnown RBP eCLIP12.19□□□□□ -0.46
CACNB3-223ENST00000552480 DPP6P42658 865 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 NXPH1P58417 271 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 C21orf58P58505 322 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 CSNK1G2P78368 415 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 RAE1P78406 368 aaKnown RBP12.19□□□□□ -0.46
CACNB3-223ENST00000552480 KPNB1Q14974 876 aaKnown RBP12.19□□□□□ -0.46
CACNB3-223ENST00000552480 ELOCQ15369 112 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 PIGGQ5H8A4 983 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 LAYNQ6UX15 382 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 WDR5BQ86VZ2 330 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 SYT12Q8IV01 421 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 RBM12BQ8IXT5 1001 aaKnown RBP12.19□□□□□ -0.46
CACNB3-223ENST00000552480 TMEFF1Q8IYR6 380 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 ADGRF3Q8IZF5 1079 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 MINDY1Q8N5J2 469 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 DPP10Q8N608 796 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 OR2L3Q8NG85 312 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 OR4E2Q8NGC2 313 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 CLHC1Q8NHS4 586 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 WDR60Q8WVS4 1066 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 SLC22A18Q96BI1 424 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 TESCQ96BS2 214 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 PRAP1Q96NZ9 151 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 GPATCH1Q9BRR8 931 aaKnown RBP12.19□□□□□ -0.46
CACNB3-223ENST00000552480 EBPLQ9BY08 206 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 SRMSQ9H3Y6 488 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 CAAP1Q9H8G2 361 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 SLC6A20Q9NP91 592 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 SPAG4Q9NPE6 437 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 SPHK1Q9NYA1 384 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 CPNE7Q9UBL6 633 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 MAPRE3Q9UPY8 281 aa12.19□□□□□ -0.46
CACNB3-223ENST00000552480 FANCMQ8IYD8 2048 aa12.18□□□□□ -0.46
CACNB3-223ENST00000552480 EML5Q05BV3 1969 aa12.18□□□□□ -0.46
CACNB3-223ENST00000552480 IGKV1-8A0A0C4DH67 115 aa12.18□□□□□ -0.46
CACNB3-223ENST00000552480 FEZF1A0PJY2 475 aa12.18□□□□□ -0.46
CACNB3-223ENST00000552480 ISM1B1AKI9 464 aa12.18□□□□□ -0.46
CACNB3-223ENST00000552480 FXYD1O00168 92 aa12.18□□□□□ -0.46
CACNB3-223ENST00000552480 BTN3A3O00478 584 aa12.18□□□□□ -0.46
CACNB3-223ENST00000552480 TRIM38O00635 465 aa12.18□□□□□ -0.46
CACNB3-223ENST00000552480 SEMA3DO95025 777 aa12.18□□□□□ -0.46
CACNB3-223ENST00000552480 TGFB1P01137 390 aa12.18□□□□□ -0.46
CACNB3-223ENST00000552480 TDGF1P13385 188 aa12.18□□□□□ -0.46
CACNB3-223ENST00000552480 PRPS1L1P21108 318 aa12.18□□□□□ -0.46
CACNB3-223ENST00000552480 GSTM2P28161 218 aa12.18□□□□□ -0.46
CACNB3-223ENST00000552480 GRK3P35626 688 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms