RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 VPS29Q9UBQ0 182 aa7.87□□□□□ -1.15
CHPT1-208ENST00000552215 VTI1BQ9UEU0 232 aa7.87□□□□□ -1.15
CHPT1-208ENST00000552215 SUSD2Q9UGT4 822 aa7.87□□□□□ -1.15
CHPT1-208ENST00000552215 PATJQ8NI35 1801 aa7.87□□□□□ -1.15
CHPT1-208ENST00000552215 CHD5Q8TDI0 1954 aa7.87□□□□□ -1.15
CHPT1-208ENST00000552215 ZNF839A8K0R7 811 aa7.87□□□□□ -1.15
CHPT1-208ENST00000552215 SLC22A3O75751 556 aa7.87□□□□□ -1.15
CHPT1-208ENST00000552215 TSPAN12O95859 305 aa7.87□□□□□ -1.15
CHPT1-208ENST00000552215 GSTM1P09488 218 aa7.87□□□□□ -1.15
CHPT1-208ENST00000552215 RPS3P23396 243 aaKnown RBP eCLIP7.87□□□□□ -1.15
CHPT1-208ENST00000552215 CXCR2P25025 360 aa7.87□□□□□ -1.15
CHPT1-208ENST00000552215 SCTRP47872 440 aa7.87□□□□□ -1.15
CHPT1-208ENST00000552215 MANFP55145 182 aaKnown RBP7.87□□□□□ -1.15
CHPT1-208ENST00000552215 MTPNP58546 118 aa7.87□□□□□ -1.15
CHPT1-208ENST00000552215 GSTM4Q03013 218 aa7.87□□□□□ -1.15
CHPT1-208ENST00000552215 METRNLQ641Q3 311 aa7.87□□□□□ -1.15
CHPT1-208ENST00000552215 MINDY1Q8N5J2 469 aa7.87□□□□□ -1.15
CHPT1-208ENST00000552215 CAMKK1Q8N5S9 505 aa7.87□□□□□ -1.15
CHPT1-208ENST00000552215 SORT1Q99523 831 aa7.87□□□□□ -1.15
CHPT1-208ENST00000552215 RAPGEFL1Q9UHV5 662 aa7.87□□□□□ -1.15
CHPT1-208ENST00000552215 BAG5Q9UL15 447 aa7.87□□□□□ -1.15
CHPT1-208ENST00000552215 MUC3AQ02505 3323 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 A0A0A6YYC8 382 aaPredicted RBP7.86□□□□□ -1.15
CHPT1-208ENST00000552215 A8MUI8 341 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 I3L1I5 382 aaPredicted RBP7.86□□□□□ -1.15
CHPT1-208ENST00000552215 C1GALT1C1LP0DN25 315 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 CBSLP0DN79 551 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 COX4I1P13073 169 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 CBSP35520 551 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 MNAT1P51948 309 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 TBL3Q12788 808 aaKnown RBP7.86□□□□□ -1.15
CHPT1-208ENST00000552215 GRIK2Q13002 908 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 TMEM259Q4ZIN3 620 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 SPANXN4Q5MJ08 99 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 ICE2Q659A1 982 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 CYHR1Q6ZMK1 362 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 ZC3H7AQ8IWR0 971 aaKnown RBP7.86□□□□□ -1.15
CHPT1-208ENST00000552215 ARHGAP24Q8N264 748 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 KYQ8NBH2 561 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 VPS37AQ8NEZ2 397 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 OR7G3Q8NG95 312 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 OR7A2PQ8NGA2 310 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 OR5M3Q8NGP4 307 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 PMEPA1Q969W9 287 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 SPNS1Q9H2V7 528 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 EHD1Q9H4M9 534 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 EFCAB1Q9HAE3 211 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 CTPS2Q9NRF8 586 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 EURLQ9NYK6 297 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 ZNF624Q9P2J8 865 aaPredicted RBP7.86□□□□□ -1.15
CHPT1-208ENST00000552215 DLGAP4Q9Y2H0 992 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 COPG1Q9Y678 874 aaKnown RBP7.86□□□□□ -1.15
CHPT1-208ENST00000552215 PTPRDP23468 1912 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 NYNRINQ9P2P1 1898 aaKnown RBP7.86□□□□□ -1.15
CHPT1-208ENST00000552215 C4orf47A7E2U8 309 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 SLCO1B7G3V0H7 640 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 CD1EP15812 388 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 GM2AP17900 193 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 NT5EP21589 574 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 CSTF2P33240 577 aaKnown RBP eCLIP7.86□□□□□ -1.153e-6■■■□□ 17.8
CHPT1-208ENST00000552215 MPLP40238 635 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 TIAL1Q01085 375 aaKnown RBP eCLIP7.86□□□□□ -1.15
CHPT1-208ENST00000552215 STX4Q12846 297 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 EIF2B5Q13144 721 aaKnown RBP7.86□□□□□ -1.15
CHPT1-208ENST00000552215 ZC3H14Q6PJT7 736 aaKnown RBP7.86□□□□□ -1.15
CHPT1-208ENST00000552215 SLC2A7Q6PXP3 512 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 TREML1Q86YW5 311 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 ZNF548Q8NEK5 533 aaPredicted RBP7.86□□□□□ -1.15
CHPT1-208ENST00000552215 WDR48Q8TAF3 677 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 REPS1Q96D71 796 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 TPD52L3Q96J77 140 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 C7orf26Q96N11 449 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 TMEM74Q96NL1 305 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 GAL3ST4Q96RP7 486 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 ELF4Q99607 663 aaPredicted RBP7.86□□□□□ -1.15
CHPT1-208ENST00000552215 TMEM79Q9BSE2 394 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 ADAP2Q9NPF8 381 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 GIMAP4Q9NUV9 329 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 C1orf109Q9NX04 203 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 EHD3Q9NZN3 535 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 BCAP29Q9UHQ4 241 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 TSC2P49815 1807 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 SLC5A10A0PJK1 596 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 MYO1GB0I1T2 1018 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 C5orf58C9J3I9 102 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 SGK494L7N484 410 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 UBXN7O94888 489 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 THRAP10827 490 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 NCK1P16333 377 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 HNMTP50135 292 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 SLC7A2P52569 658 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 RPS26P62854 115 aaKnown RBP7.86□□□□□ -1.15
CHPT1-208ENST00000552215 PPP1R8Q12972 351 aaKnown RBP7.86□□□□□ -1.15
CHPT1-208ENST00000552215 CYP27C1Q4G0S4 372 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 TNFAIP8L2Q6P589 184 aaPredicted RBP7.86□□□□□ -1.15
CHPT1-208ENST00000552215 KIAA2013Q8IYS2 634 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 TBC1D21Q8IYX1 336 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 LSMEM2Q8N112 164 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 MMP21Q8N119 569 aa7.86□□□□□ -1.15
CHPT1-208ENST00000552215 SYNPOQ8N3V7 929 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms