RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 ERGIC2Q96RQ1 377 aa5.09□□□□□ -1.59
HOXB3-213ENST00000552000 SELENOSQ9BQE4 189 aa5.09□□□□□ -1.59
HOXB3-213ENST00000552000 POLDIP3Q9BY77 421 aaKnown RBP5.09□□□□□ -1.59
HOXB3-213ENST00000552000 FAM96AQ9H5X1 160 aa5.09□□□□□ -1.59
HOXB3-213ENST00000552000 HAUS4Q9H6D7 363 aa5.09□□□□□ -1.59
HOXB3-213ENST00000552000 ZNF304Q9HCX3 659 aa5.09□□□□□ -1.59
HOXB3-213ENST00000552000 KCNJ16Q9NPI9 418 aa5.09□□□□□ -1.59
HOXB3-213ENST00000552000 IL1RAPL1Q9NZN1 696 aa5.09□□□□□ -1.59
HOXB3-213ENST00000552000 OR6C2Q9NZP2 312 aa5.09□□□□□ -1.59
HOXB3-213ENST00000552000 LRFN1Q9P244 771 aa5.09□□□□□ -1.59
HOXB3-213ENST00000552000 ZNF282Q9UDV7 671 aaPredicted RBP5.09□□□□□ -1.59
HOXB3-213ENST00000552000 CRLS1Q9UJA2 301 aa5.09□□□□□ -1.59
HOXB3-213ENST00000552000 RNF6Q9Y252 685 aa5.09□□□□□ -1.59
HOXB3-213ENST00000552000 ASB1Q9Y576 335 aa5.09□□□□□ -1.59
HOXB3-213ENST00000552000 ARL5AQ9Y689 179 aa5.09□□□□□ -1.59
HOXB3-213ENST00000552000 ARHGAP21Q5T5U3 1957 aa5.09□□□□□ -1.6
HOXB3-213ENST00000552000 PKD1L1Q8TDX9 2849 aa5.09□□□□□ -1.6
HOXB3-213ENST00000552000 LOC285095A0A1B0GVY8 99 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 FITM1A5D6W6 292 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 ASPDHA6ND91 283 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 LRRC53A6NM62 1247 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 MYO1FO00160 1098 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 RASGRF2O14827 1237 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 CTSVO60911 334 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 CTAG2O75638 210 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 SRP72O76094 671 aaKnown RBP5.08□□□□□ -1.6
HOXB3-213ENST00000552000 TPOP07202 933 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 HEXBP07686 556 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 INHBBP09529 407 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 SKILP12757 684 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 ATP1B2P14415 290 aaPredicted RBP5.08□□□□□ -1.6
HOXB3-213ENST00000552000 ZNF24P17028 368 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 FBLP22087 321 aaKnown RBP5.08□□□□□ -1.6
HOXB3-213ENST00000552000 PTPN3P26045 913 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 PCSK6P29122 969 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 EEF1DP29692 281 aaKnown RBP5.08□□□□□ -1.6
HOXB3-213ENST00000552000 CHRNB4P30926 498 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 PTGER1P34995 402 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 TAS2R40P59535 323 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 XIAPP98170 497 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 RPA4Q13156 261 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 TUBA3CQ13748 450 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 BRD3Q15059 726 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 OR1C1Q15619 314 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 SLC1A5Q15758 541 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 FAM214AQ32MH5 1076 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 TEX44Q53QW1 395 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 ZC3H12BQ5HYM0 836 aaKnown RBP5.08□□□□□ -1.6
HOXB3-213ENST00000552000 TCTE1Q5JU00 501 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 ACER2Q5QJU3 275 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 WASHC2DQ5SRD0 308 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 TUBA3EQ6PEY2 450 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 FIGLAQ6QHK4 219 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 NAPRTQ6XQN6 538 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 GALNTL5Q7Z4T8 443 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.08□□□□□ -1.6
HOXB3-213ENST00000552000 ZZZ3Q8IYH5 903 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 TBC1D21Q8IYX1 336 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 BEST3Q8N1M1 668 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 MDS2Q8NDY4 140 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 OR13C4Q8NGS5 318 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 ENOX1Q8TC92 643 aaKnown RBP5.08□□□□□ -1.6
HOXB3-213ENST00000552000 RAPGEF5Q92565 580 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 ULK4Q96C45 1275 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 RMND5BQ96G75 393 aaPredicted RBP5.08□□□□□ -1.6
HOXB3-213ENST00000552000 OXNAD1Q96HP4 312 aaPredicted RBP5.08□□□□□ -1.6
HOXB3-213ENST00000552000 C18orf12Q96KH6 178 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 TEKT5Q96M29 485 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 DMRTB1Q96MA1 342 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 FRMD6Q96NE9 622 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 ZNF285Q96NJ3 590 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 RNF157Q96PX1 679 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 COPS8Q99627 209 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 GPATCH1Q9BRR8 931 aaKnown RBP5.08□□□□□ -1.6
HOXB3-213ENST00000552000 ISCUQ9H1K1 167 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 ANKRD10Q9NXR5 420 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.08□□□□□ -1.6
HOXB3-213ENST00000552000 TRPC4Q9UBN4 977 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 CIDEBQ9UHD4 219 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 TEKT2Q9UIF3 430 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 SOX13Q9UN79 622 aa5.08□□□□□ -1.6
HOXB3-213ENST00000552000 IGLV3-12A0A075B6K2 115 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 LOC102723996A0A087X1L8 192 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 LOC105369274A0A096LPK9 316 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 IGHV3-20A0A0C4DH32 117 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 LOC102723532A0A0G2JNH3 316 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 A0A0J9YVX5 310 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 FAM237BA0A1B0GVD1 139 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 A0A1W2PQ72 361 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 HYKKA2RU49 373 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 LRRD1A4D1F6 860 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 LRRC10BA6NIK2 292 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 C2orf81A6NN90 581 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 CCL22O00626 93 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 APOL1O14791 398 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 PPP1R12AO14974 1030 aaPredicted RBP5.07□□□□□ -1.6
HOXB3-213ENST00000552000 NRP2O60462 931 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 STK10O94804 968 aaKnown RBP5.07□□□□□ -1.6
HOXB3-213ENST00000552000 AP2A1O95782 977 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 LY6G6DO95868 133 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms