RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 ACTN3Q08043 901 aaPredicted RBP14.41□□□□□ -0.1
CACNB3-220ENST00000551716 PMPCAQ10713 525 aa14.41□□□□□ -0.1
CACNB3-220ENST00000551716 MINDY4Q4G0A6 757 aa14.41□□□□□ -0.1
CACNB3-220ENST00000551716 MFSD4BQ5TF39 518 aa14.41□□□□□ -0.1
CACNB3-220ENST00000551716 ARHGAP11AQ6P4F7 1023 aa14.41□□□□□ -0.1
CACNB3-220ENST00000551716 CLEC9AQ6UXN8 241 aa14.41□□□□□ -0.1
CACNB3-220ENST00000551716 VRK3Q8IV63 474 aa14.41□□□□□ -0.1
CACNB3-220ENST00000551716 CPSF7Q8N684 471 aaKnown RBP14.41□□□□□ -0.1
CACNB3-220ENST00000551716 MCOLN3Q8TDD5 553 aa14.41□□□□□ -0.1
CACNB3-220ENST00000551716 PLCD4Q9BRC7 762 aa14.41□□□□□ -0.1
CACNB3-220ENST00000551716 PLEKHA6Q9Y2H5 1048 aa14.41□□□□□ -0.1
CACNB3-220ENST00000551716 CSPG4Q6UVK1 2322 aa14.4□□□□□ -0.1
CACNB3-220ENST00000551716 APOC4-APOC2K7ER74 178 aa14.4□□□□□ -0.1
CACNB3-220ENST00000551716 NDC80O14777 642 aa14.4□□□□□ -0.1
CACNB3-220ENST00000551716 PSTPIP1O43586 416 aa14.4□□□□□ -0.1
CACNB3-220ENST00000551716 APOC2P02655 101 aa14.4□□□□□ -0.1
CACNB3-220ENST00000551716 PSMB5P28074 263 aa14.4□□□□□ -0.1
CACNB3-220ENST00000551716 SYT16Q17RD7 645 aa14.4□□□□□ -0.1
CACNB3-220ENST00000551716 HKDC1Q2TB90 917 aa14.4□□□□□ -0.1
CACNB3-220ENST00000551716 PAOXQ6QHF9 649 aa14.4□□□□□ -0.1
CACNB3-220ENST00000551716 ARSKQ6UWY0 536 aa14.4□□□□□ -0.1
CACNB3-220ENST00000551716 ANKRD37Q7Z713 158 aa14.4□□□□□ -0.1
CACNB3-220ENST00000551716 PAQR7Q86WK9 346 aa14.4□□□□□ -0.1
CACNB3-220ENST00000551716 RPS19BP1Q86WX3 136 aaKnown RBP14.4□□□□□ -0.1
CACNB3-220ENST00000551716 CCDC71Q8IV32 467 aaPredicted RBP14.4□□□□□ -0.1
CACNB3-220ENST00000551716 NUDT8Q8WV74 236 aa14.4□□□□□ -0.1
CACNB3-220ENST00000551716 HAUS1Q96CS2 278 aa14.4□□□□□ -0.1
CACNB3-220ENST00000551716 SEC16BQ96JE7 1060 aa14.4□□□□□ -0.1
CACNB3-220ENST00000551716 FOPNLQ96NB1 174 aa14.4□□□□□ -0.1
CACNB3-220ENST00000551716 LPAR4Q99677 370 aa14.4□□□□□ -0.1
CACNB3-220ENST00000551716 NPAS2Q99743 824 aa14.4□□□□□ -0.1
CACNB3-220ENST00000551716 SARGQ9BW04 601 aa14.4□□□□□ -0.1
CACNB3-220ENST00000551716 SLC6A16Q9GZN6 736 aa14.4□□□□□ -0.1
CACNB3-220ENST00000551716 LIME1Q9H400 295 aa14.4□□□□□ -0.1
CACNB3-220ENST00000551716 TRIM45Q9H8W5 580 aaPredicted RBP14.4□□□□□ -0.1
CACNB3-220ENST00000551716 RASSF1Q9NS23 344 aa14.4□□□□□ -0.1
CACNB3-220ENST00000551716 TTC7AQ9ULT0 858 aaPredicted RBP14.4□□□□□ -0.1
CACNB3-220ENST00000551716 KLF13Q9Y2Y9 288 aaPredicted RBP14.4□□□□□ -0.1
CACNB3-220ENST00000551716 L3MBTL1Q9Y468 752 aa14.4□□□□□ -0.1
CACNB3-220ENST00000551716 HRH3Q9Y5N1 445 aa14.4□□□□□ -0.1
CACNB3-220ENST00000551716 NSD1Q96L73 2696 aaPredicted RBP14.4□□□□□ -0.1
CACNB3-220ENST00000551716 hCG_1818297A0A087WSY0 165 aa14.39□□□□□ -0.11
CACNB3-220ENST00000551716 MROH6A6NGR9 719 aa14.39□□□□□ -0.11
CACNB3-220ENST00000551716 KPNA5O15131 536 aa14.39□□□□□ -0.11
CACNB3-220ENST00000551716 OR1I1O60431 355 aa14.39□□□□□ -0.11
CACNB3-220ENST00000551716 C1orf105O95561 183 aa14.39□□□□□ -0.11
CACNB3-220ENST00000551716 TPH1P17752 444 aa14.39□□□□□ -0.11
CACNB3-220ENST00000551716 TFEBP19484 476 aa14.39□□□□□ -0.11
CACNB3-220ENST00000551716 MAT1AQ00266 395 aaKnown RBP14.39□□□□□ -0.11
CACNB3-220ENST00000551716 SPARCL1Q14515 664 aa14.39□□□□□ -0.11
CACNB3-220ENST00000551716 CCDC181Q5TID7 509 aa14.39□□□□□ -0.11
CACNB3-220ENST00000551716 LANCL3Q6ZV70 420 aa14.39□□□□□ -0.11
CACNB3-220ENST00000551716 Q71RC1 249 aaPredicted RBP14.39□□□□□ -0.11
CACNB3-220ENST00000551716 PCGF5Q86SE9 256 aa14.39□□□□□ -0.11
CACNB3-220ENST00000551716 CDKL3Q8IVW4 592 aaPredicted RBP14.39□□□□□ -0.11
CACNB3-220ENST00000551716 AMER2Q8N7J2 671 aa14.39□□□□□ -0.11
CACNB3-220ENST00000551716 ARSGQ96EG1 525 aa14.39□□□□□ -0.11
CACNB3-220ENST00000551716 OR2A5Q96R48 311 aa14.39□□□□□ -0.11
CACNB3-220ENST00000551716 CDCP1Q9H5V8 836 aa14.39□□□□□ -0.11
CACNB3-220ENST00000551716 MRPS30Q9NP92 439 aaKnown RBP14.39□□□□□ -0.11
CACNB3-220ENST00000551716 SPATA7Q9P0W8 599 aa14.39□□□□□ -0.11
CACNB3-220ENST00000551716 HCFC1P51610 2035 aa14.39□□□□□ -0.11
CACNB3-220ENST00000551716 A0A1W2PPV9 198 aa14.38□□□□□ -0.11
CACNB3-220ENST00000551716 NRP2O60462 931 aa14.38□□□□□ -0.11
CACNB3-220ENST00000551716 CDC40O60508 579 aaKnown RBP eCLIP14.38□□□□□ -0.11
CACNB3-220ENST00000551716 HEXAP06865 529 aa14.38□□□□□ -0.11
CACNB3-220ENST00000551716 EZRP15311 586 aaKnown RBP14.38□□□□□ -0.11
CACNB3-220ENST00000551716 COMTP21964 271 aa14.38□□□□□ -0.11
CACNB3-220ENST00000551716 AOAHP28039 575 aa14.38□□□□□ -0.11
CACNB3-220ENST00000551716 FOXN2P32314 431 aa14.38□□□□□ -0.11
CACNB3-220ENST00000551716 KIR2DL3P43628 341 aa14.38□□□□□ -0.11
CACNB3-220ENST00000551716 EFNA3P52797 238 aa14.38□□□□□ -0.11
CACNB3-220ENST00000551716 POU6F1Q14863 301 aa14.38□□□□□ -0.11
CACNB3-220ENST00000551716 TMEM198Q66K66 360 aa14.38□□□□□ -0.11
CACNB3-220ENST00000551716 BBS12Q6ZW61 710 aa14.38□□□□□ -0.11
CACNB3-220ENST00000551716 CCDC50Q8IVM0 306 aa14.38□□□□□ -0.11
CACNB3-220ENST00000551716 KLHDC8BQ8IXV7 354 aa14.38□□□□□ -0.11
CACNB3-220ENST00000551716 ZZZ3Q8IYH5 903 aa14.38□□□□□ -0.11
CACNB3-220ENST00000551716 KATNAL2Q8IYT4 538 aa14.38□□□□□ -0.11
CACNB3-220ENST00000551716 ARHGEF39Q8N4T4 335 aa14.38□□□□□ -0.11
CACNB3-220ENST00000551716 OR10Q1Q8NGQ4 319 aa14.38□□□□□ -0.11
CACNB3-220ENST00000551716 OR51Q1Q8NH59 317 aa14.38□□□□□ -0.11
CACNB3-220ENST00000551716 C16orf52Q8NHV5 167 aa14.38□□□□□ -0.11
CACNB3-220ENST00000551716 SKA2Q8WVK7 121 aaPredicted RBP14.38□□□□□ -0.11
CACNB3-220ENST00000551716 SPATA13Q96N96 652 aa14.38□□□□□ -0.11
CACNB3-220ENST00000551716 LMBRD1Q9NUN5 540 aa14.38□□□□□ -0.11
CACNB3-220ENST00000551716 CCDC162PA2VCL2 907 aa14.37□□□□□ -0.11
CACNB3-220ENST00000551716 MAN1A2O60476 641 aa14.37□□□□□ -0.11
CACNB3-220ENST00000551716 CCNDBP1O95273 360 aa14.37□□□□□ -0.11
CACNB3-220ENST00000551716 NSA2O95478 260 aaKnown RBP14.37□□□□□ -0.11
CACNB3-220ENST00000551716 IL10P22301 178 aa14.37□□□□□ -0.11
CACNB3-220ENST00000551716 TRHRP34981 398 aaPredicted RBP14.37□□□□□ -0.11
CACNB3-220ENST00000551716 RPA3P35244 121 aaPredicted RBP14.37□□□□□ -0.11
CACNB3-220ENST00000551716 ZFP36L2P47974 494 aaKnown RBP14.37□□□□□ -0.11
CACNB3-220ENST00000551716 HLCSP50747 726 aa14.37□□□□□ -0.11
CACNB3-220ENST00000551716 NUP107P57740 925 aa14.37□□□□□ -0.11
CACNB3-220ENST00000551716 NSDHLQ15738 373 aa14.37□□□□□ -0.11
CACNB3-220ENST00000551716 DEFB113Q30KQ7 82 aa14.37□□□□□ -0.11
CACNB3-220ENST00000551716 CMPK2Q5EBM0 449 aa14.37□□□□□ -0.11
CACNB3-220ENST00000551716 PAPD4Q6PIY7 484 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms