RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 SLC2A11Q9BYW1 496 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 LAT2Q9GZY6 243 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 COPS7BQ9H9Q2 264 aaPredicted RBP4.49□□□□□ -1.69
LIMA1-205ENST00000550592 TRPV4Q9HBA0 871 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 SDR39U1Q9NRG7 319 aaPredicted RBP4.49□□□□□ -1.69
LIMA1-205ENST00000550592 TAAR2Q9P1P5 351 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 TXNDC16Q9P2K2 825 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 TMED3Q9Y3Q3 217 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 MEGF6O75095 1541 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 USP47Q96K76 1375 aa4.49□□□□□ -1.69
LIMA1-205ENST00000550592 TRAV24A0A0B4J272 114 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 FAM86B1E9PN63 330 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 TSHBP01222 138 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 VIMP08670 466 aaKnown RBP4.48□□□□□ -1.69
LIMA1-205ENST00000550592 FAM86B2P0C5J1 330 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 LIFP15018 202 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 CA4P22748 312 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 ATP5DP30049 168 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 TIA1P31483 386 aaKnown RBP eCLIP4.48□□□□□ -1.69
LIMA1-205ENST00000550592 WNT5AP41221 380 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 RGS7P49802 495 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 DLX5P56178 289 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 TNK1Q13470 666 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 PTK6Q13882 451 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 CDO1Q16878 200 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 LACTB2Q53H82 288 aaPredicted RBP4.48□□□□□ -1.69
LIMA1-205ENST00000550592 SPOUT1Q5T280 376 aaKnown RBP4.48□□□□□ -1.69
LIMA1-205ENST00000550592 NOTUMQ6P988 496 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 SMIM29Q86T20 159 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 RYBPQ8N488 228 aaPredicted RBP4.48□□□□□ -1.69
LIMA1-205ENST00000550592 RASGEF1AQ8N9B8 481 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 KLHDC9Q8NEP7 349 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 PHLDA1Q8WV24 401 aaPredicted RBP4.48□□□□□ -1.69
LIMA1-205ENST00000550592 HEXDCQ8WVB3 486 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 PROX1Q92786 737 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 ALG14Q96F25 216 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 HES6Q96HZ4 224 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 FAM71F1Q96KD3 344 aaPredicted RBP4.48□□□□□ -1.69
LIMA1-205ENST00000550592 GSN-AS1Q9NRJ2 163 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 DDX43Q9NXZ2 648 aaKnown RBP4.48□□□□□ -1.69
LIMA1-205ENST00000550592 CACNG4Q9UBN1 327 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 KCNG2Q9UJ96 466 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 KCNK7Q9Y2U2 307 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 WNK3Q9BYP7 1800 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 KIF13BQ9NQT8 1826 aa4.48□□□□□ -1.69
LIMA1-205ENST00000550592 CACNA1AO00555 2505 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 KDM6AO15550 1401 aaPredicted RBP4.47□□□□□ -1.69
LIMA1-205ENST00000550592 ITSN1Q15811 1721 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 KNDC1Q76NI1 1749 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 LOC101059948A0A1B0GTJ6 334 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 EME2A4GXA9 379 aaPredicted RBP4.47□□□□□ -1.69
LIMA1-205ENST00000550592 ANKRD61A6NGH8 418 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 BMPR1BO00238 502 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 SLC30A4O14863 429 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 STX6O43752 255 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 LUC7L3O95232 432 aaKnown RBP4.47□□□□□ -1.69
LIMA1-205ENST00000550592 GSRP00390 522 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 RPL21P46778 160 aaKnown RBP4.47□□□□□ -1.69
LIMA1-205ENST00000550592 MFAP3P55082 362 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 MAZP56270 477 aaKnown RBP4.47□□□□□ -1.69
LIMA1-205ENST00000550592 GSDMDP57764 484 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 PTENP60484 403 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 RPL36AP83881 106 aaKnown RBP4.47□□□□□ -1.69
LIMA1-205ENST00000550592 PTGISQ16647 500 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 MEP1BQ16820 701 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 ZNF718Q3SXZ3 478 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 NHSL2Q5HYW2 709 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 WDR38Q5JTN6 314 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 SLC27A1Q6PCB7 646 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 C19orf48Q6RUI8 117 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 NRARPQ7Z6K4 114 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 NDUFAF2Q8N183 169 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 DNAJC22Q8N4W6 341 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 OR4K1Q8NGD4 311 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 PIGBQ92521 554 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 DNASE1L2Q92874 299 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 CTAGE1Q96RT6 745 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 PSD2Q9BQI7 771 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 RHNO1Q9BSD3 238 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 C2orf40Q9H1Z8 148 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 LMAN1LQ9HAT1 526 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 FGF21Q9NSA1 209 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 ECHDC1Q9NTX5 307 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 ERAP1Q9NZ08 941 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 CDH7Q9ULB5 785 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 POLR3AO14802 1390 aaPredicted RBP4.47□□□□□ -1.69
LIMA1-205ENST00000550592 HEG1Q9ULI3 1381 aa4.47□□□□□ -1.69
LIMA1-205ENST00000550592 ABCC6O95255 1503 aa4.46□□□□□ -1.69
LIMA1-205ENST00000550592 LY75O60449 1722 aa4.46□□□□□ -1.69
LIMA1-205ENST00000550592 ANKRD36BQ8N2N9 1353 aa4.46□□□□□ -1.7
LIMA1-205ENST00000550592 IGLV9-49A0A0B4J1Y8 123 aa4.46□□□□□ -1.7
LIMA1-205ENST00000550592 DUXAA6NLW8 204 aa4.46□□□□□ -1.7
LIMA1-205ENST00000550592 P2RY10O00398 339 aa4.46□□□□□ -1.7
LIMA1-205ENST00000550592 ARPC2O15144 300 aa4.46□□□□□ -1.7
LIMA1-205ENST00000550592 SLC22A2O15244 555 aa4.46□□□□□ -1.7
LIMA1-205ENST00000550592 FGF17O60258 216 aa4.46□□□□□ -1.7
LIMA1-205ENST00000550592 FRMD6-AS1P0C7T7 363 aa4.46□□□□□ -1.7
LIMA1-205ENST00000550592 SPP1P10451 314 aa4.46□□□□□ -1.7
LIMA1-205ENST00000550592 MYL6BP14649 208 aa4.46□□□□□ -1.7
LIMA1-205ENST00000550592 CA6P23280 308 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms