RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 C19orf25Q9UFG5 118 aaPredicted RBP12.87□□□□□ -0.35
TROAP-211ENST00000549891 TAC3Q9UHF0 121 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 PCYOX1Q9UHG3 505 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 CRYL1Q9Y2S2 319 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 CAPN6Q9Y6Q1 641 aa12.87□□□□□ -0.35
TROAP-211ENST00000549891 H0YIG0 161 aa12.86□□□□□ -0.35
TROAP-211ENST00000549891 FOXS1O43638 330 aa12.86□□□□□ -0.35
TROAP-211ENST00000549891 CELA2AP08217 269 aa12.86□□□□□ -0.35
TROAP-211ENST00000549891 ZSCAN5DPP0CG00 497 aa12.86□□□□□ -0.35
TROAP-211ENST00000549891 MST1P26927 711 aa12.86□□□□□ -0.35
TROAP-211ENST00000549891 ZNF630Q2M218 657 aaPredicted RBP12.86□□□□□ -0.35
TROAP-211ENST00000549891 ARMC3Q5W041 872 aa12.86□□□□□ -0.35
TROAP-211ENST00000549891 DRICH1Q6PGQ1 229 aaPredicted RBP12.86□□□□□ -0.35
TROAP-211ENST00000549891 NEK10Q6ZWH5 1172 aa12.86□□□□□ -0.35
TROAP-211ENST00000549891 GSTA5Q7RTV2 222 aa12.86□□□□□ -0.35
TROAP-211ENST00000549891 FBXO15Q8NCQ5 510 aaPredicted RBP12.86□□□□□ -0.35
TROAP-211ENST00000549891 FAM136AQ96C01 138 aa12.86□□□□□ -0.35
TROAP-211ENST00000549891 IMMP1LQ96LU5 166 aa12.86□□□□□ -0.35
TROAP-211ENST00000549891 PKP4Q99569 1192 aa12.86□□□□□ -0.35
TROAP-211ENST00000549891 DESI2Q9BSY9 194 aa12.86□□□□□ -0.35
TROAP-211ENST00000549891 SOX13Q9UN79 622 aa12.86□□□□□ -0.35
TROAP-211ENST00000549891 ZKSCAN5Q9Y2L8 839 aa12.86□□□□□ -0.35
TROAP-211ENST00000549891 PCDHGB6Q9Y5F9 930 aa12.86□□□□□ -0.35
TROAP-211ENST00000549891 SCN3AQ9NY46 2000 aa12.86□□□□□ -0.35
TROAP-211ENST00000549891 NCOA6Q14686 2063 aaPredicted RBP12.85□□□□□ -0.35
TROAP-211ENST00000549891 A0A0U1RQJ8 604 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 GOLGA8KD6RF30 607 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 GOLGA8TH3BQL2 631 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 SMAPO00193 183 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 SLC16A8O95907 504 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 ESRRAP11474 423 aaPredicted RBP12.85□□□□□ -0.35
TROAP-211ENST00000549891 AGAP20933 346 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 HRH2P25021 359 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 MGAT1P26572 445 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 ARNTP27540 789 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 GRNP28799 593 aaKnown RBP12.85□□□□□ -0.35
TROAP-211ENST00000549891 AGTR2P50052 363 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 SMSP52788 366 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 SARNPP82979 210 aaKnown RBP12.85□□□□□ -0.35
TROAP-211ENST00000549891 PTK6Q13882 451 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 SYT16Q17RD7 645 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 BTBD16Q32M84 506 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 MINDY4Q4G0A6 757 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 ACSBG2Q5FVE4 666 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 ZNF766Q5HY98 468 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 THEMIS2Q5TEJ8 643 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 MFSD4BQ5TF39 518 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 MEI1Q5TIA1 1274 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 PLAG1Q6DJT9 500 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 KIAA0930Q6ICG6 404 aaPredicted RBP12.85□□□□□ -0.35
TROAP-211ENST00000549891 CPEB2Q7Z5Q1 589 aaKnown RBP12.85□□□□□ -0.35
TROAP-211ENST00000549891 ARHGEF39Q8N4T4 335 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 ZNF354BQ96LW1 612 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 CYTH2Q99418 400 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 INTS10Q9NVR2 710 aaKnown RBP12.85□□□□□ -0.35
TROAP-211ENST00000549891 SYBUQ9NX95 663 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 SH3BGRL2Q9UJC5 107 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 GTF3C1Q12789 2109 aa12.85□□□□□ -0.35
TROAP-211ENST00000549891 PDZD2O15018 2839 aa12.84□□□□□ -0.35
TROAP-211ENST00000549891 A8MUI8 341 aa12.84□□□□□ -0.35
TROAP-211ENST00000549891 E7ENX8 843 aa12.84□□□□□ -0.35
TROAP-211ENST00000549891 HAT1O14929 419 aa12.84□□□□□ -0.35
TROAP-211ENST00000549891 TTI1O43156 1089 aa12.84□□□□□ -0.35
TROAP-211ENST00000549891 ZBTB14O43829 449 aa12.84□□□□□ -0.35
TROAP-211ENST00000549891 SLC19A2O60779 497 aa12.84□□□□□ -0.35
TROAP-211ENST00000549891 NSA2O95478 260 aaKnown RBP12.84□□□□□ -0.35
TROAP-211ENST00000549891 SYF2O95926 243 aaKnown RBP12.84□□□□□ -0.35
TROAP-211ENST00000549891 TPSB2P20231 275 aa12.84□□□□□ -0.35
TROAP-211ENST00000549891 POU3F2P20265 443 aaPredicted RBP12.84□□□□□ -0.35
TROAP-211ENST00000549891 MAT1AQ00266 395 aaKnown RBP12.84□□□□□ -0.35
TROAP-211ENST00000549891 TAP2Q03519 686 aa12.84□□□□□ -0.35
TROAP-211ENST00000549891 TPSAB1Q15661 275 aa12.84□□□□□ -0.35
TROAP-211ENST00000549891 KRTCAP3Q53RY4 240 aa12.84□□□□□ -0.35
TROAP-211ENST00000549891 ACER2Q5QJU3 275 aa12.84□□□□□ -0.35
TROAP-211ENST00000549891 CES3Q6UWW8 571 aa12.84□□□□□ -0.35
TROAP-211ENST00000549891 CILP2Q8IUL8 1156 aa12.84□□□□□ -0.35
TROAP-211ENST00000549891 TMEM139Q8IV31 216 aa12.84□□□□□ -0.35
TROAP-211ENST00000549891 REXO1L1PQ8IX06 675 aa12.84□□□□□ -0.35
TROAP-211ENST00000549891 PPFIBP2Q8ND30 876 aa12.84□□□□□ -0.35
TROAP-211ENST00000549891 THAP3Q8WTV1 239 aaPredicted RBP12.84□□□□□ -0.35
TROAP-211ENST00000549891 ZNF480Q8WV37 535 aa12.84□□□□□ -0.35
TROAP-211ENST00000549891 MAIP1Q8WWC4 291 aa12.84□□□□□ -0.35
TROAP-211ENST00000549891 MAGED4Q96JG8 741 aa12.84□□□□□ -0.35
TROAP-211ENST00000549891 VN1R1Q9GZP7 353 aa12.84□□□□□ -0.35
TROAP-211ENST00000549891 CCDC68Q9H2F9 335 aa12.84□□□□□ -0.35
TROAP-211ENST00000549891 SYNPO2LQ9H987 977 aa12.84□□□□□ -0.35
TROAP-211ENST00000549891 ABCF3Q9NUQ8 709 aa12.84□□□□□ -0.35
TROAP-211ENST00000549891 KLHL42Q9P2K6 505 aa12.84□□□□□ -0.35
TROAP-211ENST00000549891 CACNA1CQ13936 2221 aa12.84□□□□□ -0.35
TROAP-211ENST00000549891 CSMD2Q7Z408 3487 aa12.83□□□□□ -0.35
TROAP-211ENST00000549891 P2RX6O15547 441 aa12.83□□□□□ -0.36
TROAP-211ENST00000549891 KIF5CO60282 957 aa12.83□□□□□ -0.36
TROAP-211ENST00000549891 SEC24DO94855 1032 aaPredicted RBP12.83□□□□□ -0.36
TROAP-211ENST00000549891 MPC1LP0DKB6 136 aa12.83□□□□□ -0.36
TROAP-211ENST00000549891 ENO3P13929 434 aaPredicted RBP12.83□□□□□ -0.36
TROAP-211ENST00000549891 CLCN7P51798 805 aa12.83□□□□□ -0.36
TROAP-211ENST00000549891 RIPPLY3P57055 190 aa12.83□□□□□ -0.36
TROAP-211ENST00000549891 RPS15AP62244 130 aaKnown RBP12.83□□□□□ -0.36
TROAP-211ENST00000549891 KCNJ11Q14654 390 aa12.83□□□□□ -0.36
TROAP-211ENST00000549891 RPS6KA1Q15418 735 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms