RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 PLD3Q8IV08 490 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 PALM2Q8IXS6 379 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 PPIL6Q8IXY8 311 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 CPNE9Q8IYJ1 553 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 SLC35F6Q8N357 371 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 NAT8LQ8N9F0 302 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.38□□□□□ -1.39
SCAF11-211ENST00000547950 CATSPER1Q8NEC5 780 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 CD200R1Q8TD46 325 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 CALML6Q8TD86 181 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 ACTRT1Q8TDG2 376 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 GRK7Q8WTQ7 553 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 SSC4DQ8WTU2 575 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 EEF1AKMT1Q8WVE0 214 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 KCNJ9Q92806 393 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 MMABQ96EY8 250 aaPredicted RBP6.38□□□□□ -1.39
SCAF11-211ENST00000547950 CNDP1Q96KN2 507 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 C10orf90Q96M02 699 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 PRAP1Q96NZ9 151 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 OR2A5Q96R48 311 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 OSBPL9Q96SU4 736 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 NDNQ99608 321 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 AARSD1Q9BTE6 412 aaKnown RBP6.38□□□□□ -1.39
SCAF11-211ENST00000547950 LHPPQ9H008 270 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 SYNPO2LQ9H987 977 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 PPANQ9NQ55 473 aaKnown RBP6.38□□□□□ -1.39
SCAF11-211ENST00000547950 CUEDC1Q9NWM3 386 aaPredicted RBP6.38□□□□□ -1.39
SCAF11-211ENST00000547950 KLHL42Q9P2K6 505 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 ASIC3Q9UHC3 531 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 PCYOX1Q9UHG3 505 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 RUVBL1Q9Y265 456 aaKnown RBP6.38□□□□□ -1.39
SCAF11-211ENST00000547950 MED16Q9Y2X0 877 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 CSAG2Q9Y5P2 127 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 NSG1A0A0A6YYJ2 146 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 ANKUB1A6NFN9 424 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 IDSB3KWA1 339 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 TXNDC9O14530 226 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 MAP2K7O14733 419 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 HAT1O14929 419 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 PRPF4O43172 522 aaKnown RBP eCLIP6.37□□□□□ -1.39
SCAF11-211ENST00000547950 ZSCAN12O43309 604 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 KLHL18O94889 574 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 HPP00738 406 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 HEXBP07686 556 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 UQCRHP07919 91 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 RNF224P0DH78 156 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 ENO3P13929 434 aaPredicted RBP6.37□□□□□ -1.39
SCAF11-211ENST00000547950 EZRP15311 586 aaKnown RBP6.37□□□□□ -1.39
SCAF11-211ENST00000547950 PGAM1P18669 254 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 SLC26A3P40879 764 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 MAGEA3P43357 314 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 FNTAP49354 379 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 CDKN2DP55273 166 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 ABATP80404 500 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 EEF1A2Q05639 463 aaKnown RBP6.37□□□□□ -1.39
SCAF11-211ENST00000547950 CDC16Q13042 620 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 PTK6Q13882 451 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 SYT16Q17RD7 645 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 BBS9Q3SYG4 887 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 CRB2Q5IJ48 1285 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 RNASEH2BQ5TBB1 312 aaKnown RBP6.37□□□□□ -1.39
SCAF11-211ENST00000547950 ATG9BQ674R7 924 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 UGT3A1Q6NUS8 523 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 PAQR3Q6TCH7 311 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 ISLR2Q6UXK2 745 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 RIPOR1Q6ZS17 1223 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 NDUFAF7Q7L592 441 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 KCNMB4Q86W47 210 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 LMNTD2Q8IXW0 634 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 KBTBD2Q8IY47 623 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 AMER2Q8N7J2 671 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 FBXO15Q8NCQ5 510 aaPredicted RBP6.37□□□□□ -1.39
SCAF11-211ENST00000547950 OR1N1Q8NGS0 311 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 MCOLN3Q8TDD5 553 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 CCDC138Q96M89 665 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 LMF1Q96S06 567 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 EBNA1BP2Q99848 306 aaKnown RBP6.37□□□□□ -1.39
SCAF11-211ENST00000547950 MACROD1Q9BQ69 325 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 WDR77Q9BQA1 342 aaPredicted RBP6.37□□□□□ -1.39
SCAF11-211ENST00000547950 FAM167BQ9BTA0 163 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 DDX47Q9H0S4 455 aaKnown RBP6.37□□□□□ -1.39
SCAF11-211ENST00000547950 ATG10Q9H0Y0 220 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 EPS8L2Q9H6S3 715 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 ENAMQ9NRM1 1142 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 AGPAT4Q9NRZ5 378 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 TMEM184CQ9NVA4 438 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 PLA2G3Q9NZ20 509 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 PTGFRNQ9P2B2 879 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 PLEKHB1Q9UF11 243 aaPredicted RBP6.37□□□□□ -1.39
SCAF11-211ENST00000547950 TRMT6Q9UJA5 497 aaKnown RBP6.37□□□□□ -1.39
SCAF11-211ENST00000547950 ADAMTS6Q9UKP5 1117 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 MKL2Q9ULH7 1088 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 SNX12Q9UMY4 172 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 NOVA2Q9UNW9 492 aaKnown RBP6.37□□□□□ -1.39
SCAF11-211ENST00000547950 NTNG1Q9Y2I2 539 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 COMMD10Q9Y6G5 202 aa6.37□□□□□ -1.39
SCAF11-211ENST00000547950 IGLV3-12A0A075B6K2 115 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 FEZF1A0PJY2 475 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 OR2W5A6NFC9 320 aa6.36□□□□□ -1.39
SCAF11-211ENST00000547950 DNALI1O14645 258 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms