RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 SLC26A3P40879 764 aa17.86■□□□□ 0.45
PRPF40B-206ENST00000547764 OR1D4P47884 311 aa17.86■□□□□ 0.45
PRPF40B-206ENST00000547764 KCNC1P48547 511 aa17.86■□□□□ 0.45
PRPF40B-206ENST00000547764 CCR8P51685 355 aa17.86■□□□□ 0.45
PRPF40B-206ENST00000547764 EMP3P54852 163 aa17.86■□□□□ 0.45
PRPF40B-206ENST00000547764 RPS15AP62244 130 aaKnown RBP17.86■□□□□ 0.45
PRPF40B-206ENST00000547764 MUM1Q2TAK8 710 aa17.86■□□□□ 0.45
PRPF40B-206ENST00000547764 MRPL14Q6P1L8 145 aaKnown RBP17.86■□□□□ 0.45
PRPF40B-206ENST00000547764 TRMT10CQ7L0Y3 403 aaKnown RBP17.86■□□□□ 0.45
PRPF40B-206ENST00000547764 ISCA2Q86U28 154 aa17.86■□□□□ 0.45
PRPF40B-206ENST00000547764 GSPT2Q8IYD1 628 aaKnown RBP17.86■□□□□ 0.45
PRPF40B-206ENST00000547764 METTL27Q8N6F8 245 aaPredicted RBP17.86■□□□□ 0.45
PRPF40B-206ENST00000547764 EXD3Q8N9H8 876 aa17.86■□□□□ 0.45
PRPF40B-206ENST00000547764 OR4K1Q8NGD4 311 aa17.86■□□□□ 0.45
PRPF40B-206ENST00000547764 SLC5A11Q8WWX8 675 aa17.86■□□□□ 0.45
PRPF40B-206ENST00000547764 NEIL2Q969S2 332 aa17.86■□□□□ 0.45
PRPF40B-206ENST00000547764 CABS1Q96KC9 395 aa17.86■□□□□ 0.45
PRPF40B-206ENST00000547764 TSNARE1Q96NA8 513 aa17.86■□□□□ 0.45
PRPF40B-206ENST00000547764 ALG9Q9H6U8 611 aa17.86■□□□□ 0.45
PRPF40B-206ENST00000547764 NMRAL1Q9HBL8 299 aa17.86■□□□□ 0.45
PRPF40B-206ENST00000547764 POLHQ9Y253 713 aa17.86■□□□□ 0.45
PRPF40B-206ENST00000547764 PADI2Q9Y2J8 665 aa17.86■□□□□ 0.45
PRPF40B-206ENST00000547764 IKBKGQ9Y6K9 419 aa17.86■□□□□ 0.45
PRPF40B-206ENST00000547764 A0A087X1B8 175 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 POC1B-GALNT4F8VUJ3 575 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 TK2O00142 265 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 TXNDC9O14530 226 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 LCMT2O60294 686 aaKnown RBP17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 STATHP02808 62 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 ALDOAP04075 364 aaKnown RBP17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 ABHD2P08910 425 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 CD63P08962 238 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 FAM87AP0C7U9 286 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 PIM1P11309 404 aaPredicted RBP17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 TFEBP19484 476 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 GRK3P35626 688 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 BCL6P41182 706 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 GDF5P43026 501 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 MSH2P43246 934 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 CCR10P46092 362 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 SLC6A12P48065 614 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 SERPINB8P50452 374 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 PMS2P54278 862 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 IRF9Q00978 393 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 MEF2AQ02078 507 aaPredicted RBP17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 CDKL4Q5MAI5 379 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 CATSPEREQ5SY80 951 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 COX15Q7KZN9 410 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 VN1R4Q7Z5H5 301 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 CCDC91Q7Z6B0 441 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 KLHDC8AQ8IYD2 350 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 CENPLQ8N0S6 344 aaPredicted RBP17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 ARHGEF39Q8N4T4 335 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 STAG3L4Q8TBR4 150 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 ADAMTS17Q8TE56 1095 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 KCTD4Q8WVF5 259 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 NXNL1Q96CM4 212 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 THAP11Q96EK4 314 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 TXLNGYQ9BZA5 131 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 TLK1Q9UKI8 766 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 RNF112Q9ULX5 631 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 DYRK1BQ9Y463 629 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 KCNE2Q9Y6J6 123 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 MAU2Q9Y6X3 613 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 SMG1Q96Q15 3661 aaKnown RBP17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 PIEZO2Q9H5I5 2752 aa17.85■□□□□ 0.45
PRPF40B-206ENST00000547764 CCDC88CQ9P219 2028 aa17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 A0A096LPK6 155 aa17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 TAPBPO15533 448 aa17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 RIPK2O43353 540 aa17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 WDR47O94967 919 aa17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 MYBL2P10244 700 aa17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 TYK2P29597 1187 aa17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 SERPINB9P50453 376 aa17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 FOXL2P58012 376 aa17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 GARNL3Q5VVW2 1013 aa17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 SULT1C3Q6IMI6 304 aa17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 PRMT9Q6P2P2 845 aa17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 OVCH1Q7RTY7 1134 aa17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 TCAIMQ8N3R3 496 aa17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 EIF1ADQ8N9N8 165 aaKnown RBP17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 DCAKDQ8WVC6 231 aa17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 APOBEC4Q8WW27 367 aaKnown RBP17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 THAP4Q8WY91 577 aa17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 EXT2Q93063 718 aa17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 FKBP10Q96AY3 582 aa17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 MACROD1Q9BQ69 325 aa17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 TMEM79Q9BSE2 394 aa17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 SEMA4CQ9C0C4 833 aa17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 ZNF304Q9HCX3 659 aa17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 WWOXQ9NZC7 414 aa17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 CD274Q9NZQ7 290 aa17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 ZNF180Q9UJW8 692 aa17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 PTRH2Q9Y3E5 179 aaKnown RBP17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 KCNMB2Q9Y691 235 aa17.84■□□□□ 0.45
PRPF40B-206ENST00000547764 EXOC1LA0A1B0GW35 172 aa17.83■□□□□ 0.44
PRPF40B-206ENST00000547764 ALBP02768 609 aa17.83■□□□□ 0.44
PRPF40B-206ENST00000547764 GGT5P36269 586 aa17.83■□□□□ 0.44
PRPF40B-206ENST00000547764 POLE2P56282 527 aa17.83■□□□□ 0.44
PRPF40B-206ENST00000547764 FBXO48Q5FWF7 155 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms