RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 IFT52Q9Y366 437 aa18.23■□□□□ 0.51
MSLN-202ENST00000545450 OR2A25A4D2G3 310 aa18.23■□□□□ 0.51
MSLN-202ENST00000545450 SLC28A1O00337 649 aa18.23■□□□□ 0.51
MSLN-202ENST00000545450 NUAK1O60285 661 aa18.23■□□□□ 0.51
MSLN-202ENST00000545450 ERN1O75460 977 aaKnown RBP18.23■□□□□ 0.51
MSLN-202ENST00000545450 TRIM16O95361 564 aa18.23■□□□□ 0.51
MSLN-202ENST00000545450 ESR1P03372 595 aa18.23■□□□□ 0.51
MSLN-202ENST00000545450 ALPIP09923 528 aa18.23■□□□□ 0.51
MSLN-202ENST00000545450 CYP4B1P13584 511 aa18.23■□□□□ 0.51
MSLN-202ENST00000545450 CD36P16671 472 aa18.23■□□□□ 0.51
MSLN-202ENST00000545450 CSNK1DP48730 415 aa18.23■□□□□ 0.51
MSLN-202ENST00000545450 LRIF1Q5T3J3 769 aa18.23■□□□□ 0.51
MSLN-202ENST00000545450 ADAMTSL2Q86TH1 951 aa18.23■□□□□ 0.51
MSLN-202ENST00000545450 OR2AP1Q8NGE2 309 aa18.23■□□□□ 0.51
MSLN-202ENST00000545450 RSPRY1Q96DX4 576 aa18.23■□□□□ 0.51
MSLN-202ENST00000545450 FAM120BQ96EK7 910 aaKnown RBP18.23■□□□□ 0.51
MSLN-202ENST00000545450 MMP27Q9H306 513 aa18.23■□□□□ 0.51
MSLN-202ENST00000545450 EHD1Q9H4M9 534 aa18.23■□□□□ 0.51
MSLN-202ENST00000545450 BPIFA1Q9NP55 256 aa18.23■□□□□ 0.51
MSLN-202ENST00000545450 DHRS7Q9Y394 339 aa18.23■□□□□ 0.51
MSLN-202ENST00000545450 GMPPBQ9Y5P6 360 aa18.23■□□□□ 0.51
MSLN-202ENST00000545450 SAGE2PA6NJ88 616 aa18.22■□□□□ 0.51
MSLN-202ENST00000545450 EFCAB9A8MZ26 197 aa18.22■□□□□ 0.51
MSLN-202ENST00000545450 TAF4O00268 1085 aa18.22■□□□□ 0.51
MSLN-202ENST00000545450 AREL1O15033 823 aa18.22■□□□□ 0.51
MSLN-202ENST00000545450 IGSF6O95976 241 aa18.22■□□□□ 0.51
MSLN-202ENST00000545450 GNPDA1P46926 289 aa18.22■□□□□ 0.51
MSLN-202ENST00000545450 TUBA1BP68363 451 aa18.22■□□□□ 0.51
MSLN-202ENST00000545450 BCL2L1Q07817 233 aa18.22■□□□□ 0.51
MSLN-202ENST00000545450 KCNC3Q14003 757 aa18.22■□□□□ 0.51
MSLN-202ENST00000545450 MAD2L1BPQ15013 274 aaPredicted RBP18.22■□□□□ 0.51
MSLN-202ENST00000545450 SMN1Q16637 294 aaKnown RBP18.22■□□□□ 0.51
MSLN-202ENST00000545450 ZNF181Q2M3W8 571 aa18.22■□□□□ 0.51
MSLN-202ENST00000545450 CACHD1Q5VU97 1274 aa18.22■□□□□ 0.51
MSLN-202ENST00000545450 TUBA1AQ71U36 451 aa18.22■□□□□ 0.51
MSLN-202ENST00000545450 TRIM46Q7Z4K8 759 aa18.22■□□□□ 0.51
MSLN-202ENST00000545450 METTL3Q86U44 580 aaKnown RBP18.22■□□□□ 0.51
MSLN-202ENST00000545450 AKAP14Q86UN6 197 aa18.22■□□□□ 0.51
MSLN-202ENST00000545450 TSPYL5Q86VY4 417 aaPredicted RBP18.22■□□□□ 0.51
MSLN-202ENST00000545450 OR10Q1Q8NGQ4 319 aa18.22■□□□□ 0.51
MSLN-202ENST00000545450 MYLIPQ8WY64 445 aa18.22■□□□□ 0.51
MSLN-202ENST00000545450 EID2BQ96D98 161 aa18.22■□□□□ 0.51
MSLN-202ENST00000545450 SIAEQ9HAT2 523 aa18.22■□□□□ 0.51
MSLN-202ENST00000545450 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.21■□□□□ 0.51
MSLN-202ENST00000545450 PABPN1LA6NDY0 278 aaKnown RBP18.21■□□□□ 0.51
MSLN-202ENST00000545450 IQCF5A8MTL0 148 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 FFAR2O15552 330 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 UGT2B10P36537 528 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 TGFBR1P36897 503 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 PTGER3P43115 390 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 SF3B4Q15427 424 aaKnown RBP eCLIP18.21■□□□□ 0.51
MSLN-202ENST00000545450 TMEM215Q68D42 235 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 OR2T5Q6IEZ7 315 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 C22orf39Q6P5X5 142 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 SUSD1Q6UWL2 747 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 OR2T29Q8NH02 315 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 KCNH6Q9H252 994 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 SERHLQ9NQF3 203 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 ABCB10Q9NRK6 738 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 OPTCQ9UBM4 332 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 MAN2B2Q9Y2E5 1009 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 ZNF106Q9H2Y7 1883 aaKnown RBP18.21■□□□□ 0.51
MSLN-202ENST00000545450 A0A096LPI6 279 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 CXorf51AA0A1B0GTR3 108 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 TAPBPO15533 448 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 FAM20BO75063 409 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 EFNA1P20827 205 aaPredicted RBP18.21■□□□□ 0.51
MSLN-202ENST00000545450 GGT5P36269 586 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 HMGCS1Q01581 520 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 LAPTM4AQ15012 233 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 NDUFA5Q16718 116 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 ZNF404Q494X3 552 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 ZRANB3Q5FWF4 1079 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 UBE2UQ5VVX9 321 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 PPP2R2DQ66LE6 453 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 ADIPOR2Q86V24 386 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 ZSWIM9Q86XI8 627 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 IPCEF1Q8WWN9 437 aaPredicted RBP18.21■□□□□ 0.51
MSLN-202ENST00000545450 HTRA1Q92743 480 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 OTUB2Q96DC9 234 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 HOXD1Q9GZZ0 328 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 P2RY12Q9H244 342 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 DCSTAMPQ9H295 470 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 NSUN3Q9H649 340 aaKnown RBP18.21■□□□□ 0.51
MSLN-202ENST00000545450 LRTM1Q9HBL6 345 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 ZFP14Q9HCL3 533 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 TM9SF3Q9HD45 589 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 IL1RAPQ9NPH3 570 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 FARSBQ9NSD9 589 aaKnown RBP18.21■□□□□ 0.51
MSLN-202ENST00000545450 MARK1Q9P0L2 795 aa18.21■□□□□ 0.51
MSLN-202ENST00000545450 PNMA8BQ9ULN7 279 aaPredicted RBP18.21■□□□□ 0.51
MSLN-202ENST00000545450 WNT9AO14904 365 aa18.2■□□□□ 0.5
MSLN-202ENST00000545450 BNIP3LO60238 219 aa18.2■□□□□ 0.5
MSLN-202ENST00000545450 KCNK2O95069 426 aa18.2■□□□□ 0.5
MSLN-202ENST00000545450 PAPLNO95428 1278 aa18.2■□□□□ 0.5
MSLN-202ENST00000545450 S100BP04271 92 aaPredicted RBP18.2■□□□□ 0.5
MSLN-202ENST00000545450 LCKP06239 509 aa18.2■□□□□ 0.5
MSLN-202ENST00000545450 HOXB9P17482 250 aaPredicted RBP18.2■□□□□ 0.5
MSLN-202ENST00000545450 RCVRNP35243 200 aa18.2■□□□□ 0.5
MSLN-202ENST00000545450 VIPR2P41587 438 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms