RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 CREG1O75629 220 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 HTR3BO95264 441 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 SLC16A8O95907 504 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 CD63P08962 238 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 GSTA2P09210 222 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 RAB40ALP0C0E4 278 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 PRKAR1AP10644 381 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 ERGP11308 486 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 F8A1P23610 371 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 PTPN4P29074 926 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 GRIA3P42263 894 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 CCR10P46092 362 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 GABRA4P48169 554 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 ARSFP54793 590 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 CYP4F2P78329 520 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 CDC20Q12834 499 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 GPS2Q13227 327 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 SP140Q13342 867 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 ERV3-1Q14264 604 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 FASTKD3Q14CZ7 662 aaKnown RBP7.07□□□□□ -1.28
CPSF7-224ENST00000544990 TBR1Q16650 682 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 DEFB110Q30KQ9 67 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.07□□□□□ -1.28
CPSF7-224ENST00000544990 TCTE1Q5JU00 501 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 RBM20Q5T481 1227 aaKnown RBP7.07□□□□□ -1.28
CPSF7-224ENST00000544990 HECTD2Q5U5R9 776 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 PRAMEF17Q5VTA0 474 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 FAM199XQ6PEV8 388 aaPredicted RBP7.07□□□□□ -1.28
CPSF7-224ENST00000544990 BORAQ6PGQ7 559 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 PAQR3Q6TCH7 311 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 ZNF517Q6ZMY9 492 aaPredicted RBP7.07□□□□□ -1.28
CPSF7-224ENST00000544990 C3orf62Q6ZUJ4 267 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 CYS1Q717R9 158 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 PIWIL4Q7Z3Z4 852 aaKnown RBP7.07□□□□□ -1.28
CPSF7-224ENST00000544990 STRA8Q7Z7C7 330 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 SYVN1Q86TM6 617 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 MCATQ8IVS2 390 aaKnown RBP7.07□□□□□ -1.28
CPSF7-224ENST00000544990 FAM20CQ8IXL6 584 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 TTC29Q8NA56 475 aaPredicted RBP7.07□□□□□ -1.28
CPSF7-224ENST00000544990 OR2L3Q8NG85 312 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 OR2A1Q8NGT9 310 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 EEF1AKMT1Q8WVE0 214 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 DLG3Q92796 817 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 VPS39Q96JC1 886 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 CCDC138Q96M89 665 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 PKP4Q99569 1192 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 MIPEPQ99797 713 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 WDR83Q9BRX9 315 aaKnown RBP7.07□□□□□ -1.28
CPSF7-224ENST00000544990 NDC1Q9BTX1 674 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 ACAT2Q9BWD1 397 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 SPRTNQ9H040 489 aaPredicted RBP7.07□□□□□ -1.28
CPSF7-224ENST00000544990 CHST8Q9H2A9 424 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 PARVBQ9HBI1 364 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 PLAC1Q9HBJ0 212 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 SSU72Q9NP77 194 aaKnown RBP7.07□□□□□ -1.28
CPSF7-224ENST00000544990 MRPS30Q9NP92 439 aaKnown RBP7.07□□□□□ -1.28
CPSF7-224ENST00000544990 PCMTD2Q9NV79 361 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 EURLQ9NYK6 297 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 GRHL1Q9NZI5 618 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 ANKMY1Q9P2S6 941 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 POLHQ9Y253 713 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 KLHL20Q9Y2M5 609 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 POLR3KQ9Y2Y1 108 aaPredicted RBP7.07□□□□□ -1.28
CPSF7-224ENST00000544990 MRPS18BQ9Y676 258 aaKnown RBP7.07□□□□□ -1.28
CPSF7-224ENST00000544990 SEC16AO15027 2179 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 HEATR5BQ9P2D3 2071 aa7.07□□□□□ -1.28
CPSF7-224ENST00000544990 FAM95CA0A1B0GW59 222 aa7.06□□□□□ -1.28
CPSF7-224ENST00000544990 A0A1W2PPV9 198 aa7.06□□□□□ -1.28
CPSF7-224ENST00000544990 CTAGE15A4D2H0 777 aa7.06□□□□□ -1.28
CPSF7-224ENST00000544990 KRT87PA6NCN2 255 aa7.06□□□□□ -1.28
CPSF7-224ENST00000544990 FAM181BA6NEQ2 426 aa7.06□□□□□ -1.28
CPSF7-224ENST00000544990 E7ENX8 843 aa7.06□□□□□ -1.28
CPSF7-224ENST00000544990 WISP1O95388 367 aa7.06□□□□□ -1.28
CPSF7-224ENST00000544990 PGRP06401 933 aa7.06□□□□□ -1.28
CPSF7-224ENST00000544990 CTAGE8P0CG41 777 aa7.06□□□□□ -1.28
CPSF7-224ENST00000544990 PIM1P11309 404 aaPredicted RBP7.06□□□□□ -1.28
CPSF7-224ENST00000544990 SAT1P21673 171 aa7.06□□□□□ -1.28
CPSF7-224ENST00000544990 FDXRP22570 491 aa7.06□□□□□ -1.28
CPSF7-224ENST00000544990 HRH2P25021 359 aa7.06□□□□□ -1.28
CPSF7-224ENST00000544990 PSMB5P28074 263 aa7.06□□□□□ -1.28
CPSF7-224ENST00000544990 SSTR1P30872 391 aa7.06□□□□□ -1.28
CPSF7-224ENST00000544990 RORAP35398 523 aa7.06□□□□□ -1.28
CPSF7-224ENST00000544990 SLC12A2P55011 1212 aa7.06□□□□□ -1.28
CPSF7-224ENST00000544990 CDKN2DP55273 166 aa7.06□□□□□ -1.28
CPSF7-224ENST00000544990 ABATP80404 500 aa7.06□□□□□ -1.28
CPSF7-224ENST00000544990 DCDP81605 110 aaKnown RBP7.06□□□□□ -1.28
CPSF7-224ENST00000544990 TIAL1Q01085 375 aaKnown RBP eCLIP7.06□□□□□ -1.285e-6■■■■□ 21
CPSF7-224ENST00000544990 SLC7A5Q01650 507 aa7.06□□□□□ -1.28
CPSF7-224ENST00000544990 TAP2Q03519 686 aa7.06□□□□□ -1.28
CPSF7-224ENST00000544990 PRDX1Q06830 199 aaKnown RBP7.06□□□□□ -1.28
CPSF7-224ENST00000544990 LY6DQ14210 128 aa7.06□□□□□ -1.28
CPSF7-224ENST00000544990 FASTKQ14296 549 aaKnown RBP7.06□□□□□ -1.28
CPSF7-224ENST00000544990 GRM7Q14831 915 aa7.06□□□□□ -1.28
CPSF7-224ENST00000544990 DEFB109BQ30KR1 87 aa7.06□□□□□ -1.28
CPSF7-224ENST00000544990 FAM214AQ32MH5 1076 aa7.06□□□□□ -1.28
CPSF7-224ENST00000544990 LINC00303Q3SY05 128 aa7.06□□□□□ -1.28
CPSF7-224ENST00000544990 LCE2AQ5TA79 106 aaPredicted RBP7.06□□□□□ -1.28
CPSF7-224ENST00000544990 THEMIS2Q5TEJ8 643 aa7.06□□□□□ -1.28
CPSF7-224ENST00000544990 YOD1Q5VVQ6 348 aaPredicted RBP7.06□□□□□ -1.28
CPSF7-224ENST00000544990 FCRL6Q6DN72 434 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms