RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 L3MBTL4Q8NA19 623 aa6.75□□□□□ -1.33
HMGCS2-204ENST00000544913 BHLHE22Q8NFJ8 381 aaPredicted RBP6.75□□□□□ -1.33
HMGCS2-204ENST00000544913 OR4F6Q8NGB9 312 aa6.75□□□□□ -1.33
HMGCS2-204ENST00000544913 OR52E1Q8NGJ3 308 aa6.75□□□□□ -1.33
HMGCS2-204ENST00000544913 SLC37A2Q8TED4 501 aa6.75□□□□□ -1.33
HMGCS2-204ENST00000544913 JPH3Q8WXH2 748 aaPredicted RBP6.75□□□□□ -1.33
HMGCS2-204ENST00000544913 POP5Q969H6 163 aaKnown RBP6.75□□□□□ -1.33
HMGCS2-204ENST00000544913 RAD51AP1Q96B01 352 aa6.75□□□□□ -1.33
HMGCS2-204ENST00000544913 TUBGCP3Q96CW5 907 aa6.75□□□□□ -1.33
HMGCS2-204ENST00000544913 WDR34Q96EX3 536 aa6.75□□□□□ -1.33
HMGCS2-204ENST00000544913 TRAPPC9Q96Q05 1148 aa6.75□□□□□ -1.33
HMGCS2-204ENST00000544913 COL25A1Q9BXS0 654 aaPredicted RBP6.75□□□□□ -1.33
HMGCS2-204ENST00000544913 SPNS1Q9H2V7 528 aa6.75□□□□□ -1.33
HMGCS2-204ENST00000544913 TRIT1Q9H3H1 467 aaKnown RBP6.75□□□□□ -1.33
HMGCS2-204ENST00000544913 SLC32A1Q9H598 525 aa6.75□□□□□ -1.33
HMGCS2-204ENST00000544913 MVB12BQ9H7P6 319 aa6.75□□□□□ -1.33
HMGCS2-204ENST00000544913 ERVMER34-1Q9H9K5 563 aa6.75□□□□□ -1.33
HMGCS2-204ENST00000544913 SPHK1Q9NYA1 384 aa6.75□□□□□ -1.33
HMGCS2-204ENST00000544913 SPATA7Q9P0W8 599 aa6.75□□□□□ -1.33
HMGCS2-204ENST00000544913 TMEM181Q9P2C4 612 aa6.75□□□□□ -1.33
HMGCS2-204ENST00000544913 OPTCQ9UBM4 332 aa6.75□□□□□ -1.33
HMGCS2-204ENST00000544913 CD300AQ9UGN4 299 aa6.75□□□□□ -1.33
HMGCS2-204ENST00000544913 DTNAQ9Y4J8 743 aa6.75□□□□□ -1.33
HMGCS2-204ENST00000544913 HEATR5BQ9P2D3 2071 aa6.75□□□□□ -1.33
HMGCS2-204ENST00000544913 ZNF292O60281 2723 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 PRSS51A0A1B0GVH4 220 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 AQP12BA6NM10 295 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 E7EQ34 232 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 LMO7DNF2Z398 122 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 BTN3A3O00478 584 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 YY2O15391 372 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 GALR2O43603 387 aaPredicted RBP6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 DNAJA2O60884 412 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 WDR47O94967 919 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 HIST1H2AGP0C0S8 130 aaPredicted RBP6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 PRR35P0CG20 571 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 HSD17B1P14061 328 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 CD1EP15812 388 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 XRCC1P18887 633 aaPredicted RBP6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 HIST1H2ADP20671 130 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 MAP4P27816 1152 aaKnown RBP6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 SLC7A1P30825 629 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 CNR2P34972 360 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 PIK3CGP48736 1102 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 RAB28P51157 221 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 MAD2L1Q13257 205 aaPredicted RBP6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 MAP7Q14244 749 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 GPR18Q14330 331 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 ARHGAP19Q14CB8 494 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 GGTA1PQ4G0N0 100 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 AASDHQ4L235 1098 aaPredicted RBP6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 PDCD4Q53EL6 469 aaKnown RBP6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 SUSD1Q6UWL2 747 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 GK5Q6ZS86 529 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 C11orf74Q86VG3 221 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 AQP12AQ8IXF9 295 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 DDIASQ8IXT1 998 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 ST13P4Q8IZP2 240 aaPredicted RBP6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 OR2A1Q8NGT9 310 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 OR2L8Q8NGY9 312 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 OR2T11Q8NH01 316 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 NEIL2Q969S2 332 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 SPDL1Q96EA4 605 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 HIST1H2AHQ96KK5 128 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 MAGEB10Q96LZ2 347 aaPredicted RBP6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 FOPNLQ96NB1 174 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 NPAS2Q99743 824 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 HIST1H2AJQ99878 128 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 H2AFJQ9BTM1 129 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 GSDMCQ9BYG8 508 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 TRIM54Q9BYV2 358 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 DNAJC11Q9NVH1 559 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 ZIM2Q9NZV7 527 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 POLG2Q9UHN1 485 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 AP3M1Q9Y2T2 418 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 RNF11Q9Y3C5 154 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 TIMM22Q9Y584 194 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 AP4S1Q9Y587 144 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 PCDHGA2Q9Y5H1 932 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 PCM1Q15154 2024 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 EP300Q09472 2414 aaPredicted RBP6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 TRBV23OR9-2A0A075B6M9 112 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 LY6G6EA0A0G2JKS1 128 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 A0A1W2PP18 115 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 TCRBV3S1A0A5B6 114 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 TNFRSF10AO00220 468 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 FBP2O00757 339 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 PIP5K1BO14986 540 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 CASC3O15234 703 aaKnown RBP6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 SDC3O75056 442 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 TBX6O95947 436 aaPredicted RBP6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 OTCP00480 354 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 LYNP07948 512 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 UMPSP11172 480 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 HGFP14210 728 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 EPB42P16452 691 aa6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 HOXB6P17509 224 aaKnown RBP6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 VARSP26640 1264 aaKnown RBP6.74□□□□□ -1.33
HMGCS2-204ENST00000544913 CASP2P42575 452 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms