RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 IQCCQ4KMZ1 466 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 XKR4Q5GH76 650 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 TRIM46Q7Z4K8 759 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 ZNF557Q8N988 423 aaPredicted RBP17.69■□□□□ 0.42
CCT4-204ENST00000544079 KATNAL1Q9BW62 490 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 SPATA9Q9BWV2 254 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 AMBNQ9NP70 447 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 NDFIP2Q9NV92 336 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 SLC23A1Q9UHI7 598 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 POFUT2Q9Y2G5 429 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 PCDHGA2Q9Y5H1 932 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 SMIM28A0A1B0GU29 152 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 EPOP01588 193 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 PIPP12273 146 aaPredicted RBP17.69■□□□□ 0.42
CCT4-204ENST00000544079 IL2P60568 153 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 DSC2Q02487 901 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 ITKQ08881 620 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 ABRQ12979 859 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 GTF2H2Q13888 395 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 LARS2Q15031 903 aaKnown RBP17.69■□□□□ 0.42
CCT4-204ENST00000544079 VMACQ2NL98 169 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 GTF2H2CQ6P1K8 395 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 KIF18BQ86Y91 864 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 DCBLD1Q8N8Z6 715 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 CCDC120Q96HB5 630 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 HSH2DQ96JZ2 352 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 OR5M11Q96RB7 305 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 ZSCAN5AQ9BUG6 496 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 CNPPD1Q9BV87 410 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 PRRG3Q9BZD7 231 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 ZNF408Q9H9D4 720 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 RAD18Q9NS91 495 aa17.69■□□□□ 0.42
CCT4-204ENST00000544079 UXTQ9UBK9 157 aaPredicted RBP17.69■□□□□ 0.42
CCT4-204ENST00000544079 IRAK2O43187 625 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 PAGE1O75459 146 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 DIRAS1O95057 198 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 MAP2K3P46734 347 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 RRAS2P62070 204 aaPredicted RBP17.68■□□□□ 0.42
CCT4-204ENST00000544079 DAB2P98082 770 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 MED22Q15528 200 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 USP39Q53GS9 565 aaKnown RBP17.68■□□□□ 0.42
CCT4-204ENST00000544079 MZT2BQ6NZ67 158 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 HSDL2Q6YN16 418 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 C9orf62Q8N4C0 152 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 CLDN22Q8N7P3 220 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 ESAMQ96AP7 390 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 SAMD11Q96NU1 681 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 AGO3Q9H9G7 860 aaKnown RBP17.68■□□□□ 0.42
CCT4-204ENST00000544079 CRTAC1Q9NQ79 661 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 PHF11Q9UIL8 331 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 MYL12BO14950 172 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 MPZL2O60487 215 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 SLC43A1O75387 559 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 RFPL3O75679 317 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 EPN2O95208 641 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 ANXA8P13928 327 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 MYL12AP19105 171 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 S100A3P33764 101 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 NUDT6P53370 316 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 PER3P56645 1201 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 RGS1Q08116 209 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 MGAT3Q09327 533 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 IHHQ14623 411 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 PAMR1Q6UXH9 720 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 MILR1Q7Z6M3 343 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 TMC8Q8IU68 726 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 UMODL1-AS1Q8N2C9 162 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 KRTCAP2Q8N6L1 136 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 B3GNT7Q8NFL0 401 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 NLGN4YQ8NFZ3 816 aaPredicted RBP17.68■□□□□ 0.42
CCT4-204ENST00000544079 ARRDC2Q8TBH0 407 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 CDKN2AIPNLQ96HQ2 116 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 OPALINQ96PE5 141 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 TRIM45Q9H8W5 580 aaPredicted RBP17.68■□□□□ 0.42
CCT4-204ENST00000544079 RBFOX1Q9NWB1 397 aaKnown RBP17.68■□□□□ 0.42
CCT4-204ENST00000544079 ARL5AQ9Y689 179 aa17.68■□□□□ 0.42
CCT4-204ENST00000544079 LINC00854A0A1B0GVQ3 168 aa17.67■□□□□ 0.42
CCT4-204ENST00000544079 FABP12A6NFH5 140 aa17.67■□□□□ 0.42
CCT4-204ENST00000544079 NDUFS3O75489 264 aa17.67■□□□□ 0.42
CCT4-204ENST00000544079 TXNP10599 105 aaKnown RBP17.67■□□□□ 0.42
CCT4-204ENST00000544079 TNNI3P19429 210 aa17.67■□□□□ 0.42
CCT4-204ENST00000544079 POU3F3P20264 500 aaPredicted RBP17.67■□□□□ 0.42
CCT4-204ENST00000544079 CLDN8P56748 225 aa17.67■□□□□ 0.42
CCT4-204ENST00000544079 CLDN20P56880 219 aa17.67■□□□□ 0.42
CCT4-204ENST00000544079 SNRPD2P62316 118 aaKnown RBP17.67■□□□□ 0.42
CCT4-204ENST00000544079 CYP4F2P78329 520 aa17.67■□□□□ 0.42
CCT4-204ENST00000544079 PURAQ00577 322 aaKnown RBP17.67■□□□□ 0.42
CCT4-204ENST00000544079 MRPL28Q13084 256 aaKnown RBP17.67■□□□□ 0.42
CCT4-204ENST00000544079 VEPH1Q14D04 833 aa17.67■□□□□ 0.42
CCT4-204ENST00000544079 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.67■□□□□ 0.42
CCT4-204ENST00000544079 MSANTD2Q6P1R3 559 aa17.67■□□□□ 0.42
CCT4-204ENST00000544079 NOTUMQ6P988 496 aa17.67■□□□□ 0.42
CCT4-204ENST00000544079 AFTPHQ6ULP2 937 aa17.67■□□□□ 0.42
CCT4-204ENST00000544079 LBX2Q6XYB7 198 aa17.67■□□□□ 0.42
CCT4-204ENST00000544079 GPALPP1Q8IXQ4 340 aa17.67■□□□□ 0.42
CCT4-204ENST00000544079 METTL2AQ96IZ6 378 aaKnown RBP17.67■□□□□ 0.42
CCT4-204ENST00000544079 C7orf34Q96L11 122 aa17.67■□□□□ 0.42
CCT4-204ENST00000544079 ZNF578Q96N58 590 aaPredicted RBP17.67■□□□□ 0.42
CCT4-204ENST00000544079 LRTM1Q9HBL6 345 aa17.67■□□□□ 0.42
CCT4-204ENST00000544079 HHATLQ9HCP6 504 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms