RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 GALNT11Q8NCW6 608 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 CHST13Q8NET6 341 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 B3GNT7Q8NFL0 401 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 PCED1BQ96HM7 432 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 SMIM14Q96QK8 99 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 ARNT2Q9HBZ2 717 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 MCCC2Q9HCC0 563 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 ASAH2Q9NR71 780 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 NLKQ9UBE8 527 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 FAM220BPB1ANY3 271 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 CSF3P09919 207 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 TNNI3P19429 210 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 POU1F1P28069 291 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 HSPA7P48741 367 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 RORCP51449 518 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 CSTF3Q12996 717 aaKnown RBP12.28□□□□□ -0.44
SMG8-202ENST00000543872 ZMYND11Q15326 602 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 GOLGA7Q7Z5G4 137 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 KRT73Q86Y46 540 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 OR4M2Q8NGB6 313 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 CDC26Q8NHZ8 85 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 LHFPL5Q8TAF8 219 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 PHF21AQ96BD5 680 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 SEMA3CQ99985 751 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 GABARAPL1Q9H0R8 117 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 MYOZ2Q9NPC6 264 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 CPNE7Q9UBL6 633 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 KLK4Q9Y5K2 254 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 COL11A1P12107 1806 aaPredicted RBP12.28□□□□□ -0.44
SMG8-202ENST00000543872 BRCA1P38398 1863 aaKnown RBP12.28□□□□□ -0.44
SMG8-202ENST00000543872 RPP40O75818 363 aaKnown RBP12.28□□□□□ -0.44
SMG8-202ENST00000543872 IL6P05231 212 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 TNFRSF1BP20333 461 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 DDCP20711 480 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 GPC1P35052 558 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 SOX9P48436 509 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 ZNF33AQ06730 810 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 SV2CQ496J9 727 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 NDUFAF5Q5TEU4 345 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 ZNF551Q7Z340 670 aaPredicted RBP12.28□□□□□ -0.44
SMG8-202ENST00000543872 PSMG2Q969U7 264 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 HMCESQ96FZ2 354 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 PPP1R2P1Q96PQ5 205 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 CPPED1Q9BRF8 314 aaPredicted RBP12.28□□□□□ -0.44
SMG8-202ENST00000543872 ERVMER34-1Q9H9K5 563 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 MED16Q9Y2X0 877 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 CMAHPQ9Y471 501 aa12.28□□□□□ -0.44
SMG8-202ENST00000543872 AP2A2O94973 939 aa12.27□□□□□ -0.44
SMG8-202ENST00000543872 CCNDBP1O95273 360 aa12.27□□□□□ -0.44
SMG8-202ENST00000543872 HOXA11P31270 313 aaPredicted RBP12.27□□□□□ -0.44
SMG8-202ENST00000543872 PTPN5P54829 565 aa12.27□□□□□ -0.44
SMG8-202ENST00000543872 IL2P60568 153 aa12.27□□□□□ -0.44
SMG8-202ENST00000543872 GTF2H2Q13888 395 aa12.27□□□□□ -0.44
SMG8-202ENST00000543872 SAXO2Q658L1 398 aa12.27□□□□□ -0.44
SMG8-202ENST00000543872 LAMTOR1Q6IAA8 161 aa12.27□□□□□ -0.44
SMG8-202ENST00000543872 GTF2H2CQ6P1K8 395 aa12.27□□□□□ -0.44
SMG8-202ENST00000543872 MAMSTRQ6ZN01 415 aa12.27□□□□□ -0.44
SMG8-202ENST00000543872 CREB3L2Q70SY1 520 aa12.27□□□□□ -0.44
SMG8-202ENST00000543872 EIF3MQ7L2H7 374 aaKnown RBP12.27□□□□□ -0.44
SMG8-202ENST00000543872 RDH10Q8IZV5 341 aa12.27□□□□□ -0.44
SMG8-202ENST00000543872 SPPL2AQ8TCT8 520 aa12.27□□□□□ -0.44
SMG8-202ENST00000543872 TMEM203Q969S6 136 aa12.27□□□□□ -0.44
SMG8-202ENST00000543872 CDKN2AIPNLQ96HQ2 116 aa12.27□□□□□ -0.44
SMG8-202ENST00000543872 GPRC5BQ9NZH0 403 aa12.27□□□□□ -0.44
SMG8-202ENST00000543872 A0A075B6Q4 140 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 FAM240BA0A1B0GVZ2 78 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 UPK3BL1B0FP48 263 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 UPK3BL2E5RIL1 263 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 FZD9O00144 591 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 SGTAO43765 313 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 ZNF254O75437 659 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 CDRT1O95170 752 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 C9P02748 559 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 CLEC2LP0C7M8 214 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 GGT2P36268 569 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 MAGEA2P43356 314 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 MAN2A2P49641 1150 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 CDH18Q13634 790 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 DOC2BQ14184 412 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 DCAF4L1Q3SXM0 396 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 SLC27A1Q6PCB7 646 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 ZNF621Q6ZSS3 439 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 DGLUCYQ7Z3D6 616 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 RNF130Q86XS8 419 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 PHC2Q8IXK0 858 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 SCAMP5Q8TAC9 235 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 OSMRQ99650 979 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 PITX2Q99697 317 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.27□□□□□ -0.45
SMG8-202ENST00000543872 LIN7BQ9HAP6 207 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 GALNT9Q9HCQ5 603 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 RLIMQ9NVW2 624 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 A0A1W2PQL4 384 aaPredicted RBP12.27□□□□□ -0.45
SMG8-202ENST00000543872 LINC01387J3KSC0 135 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 RFXANKO14593 260 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 RGS14O43566 566 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 VPS26AO75436 327 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 CPSF4O95639 269 aaKnown RBP12.27□□□□□ -0.45
SMG8-202ENST00000543872 C1QBP02746 253 aa12.27□□□□□ -0.45
SMG8-202ENST00000543872 ALAS2P22557 587 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms