RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 C1orf216Q8TAB5 229 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 HDAC10Q969S8 669 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 CHFRQ96EP1 664 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 ZNF845Q96IR2 970 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 DMRTB1Q96MA1 342 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 GPR78Q96P69 363 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 ADPRHL2Q9NX46 363 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 SLCO3A1Q9UIG8 710 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 SLC39A10Q9ULF5 831 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 IRAK3Q9Y616 596 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 LAMA2P24043 3122 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 LOC390937A0A1W2PQ73 354 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 FPGTO14772 594 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 INPP4BO15327 924 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 FZD6O60353 706 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 WISP3O95389 354 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 APOC1P02654 83 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 TP53P04637 393 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 FGF1P05230 155 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 ACAA1P09110 424 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 CLEC2LP0C7M8 214 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 TIMP2P16035 220 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 PAMP19021 973 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 HTR1BP28222 390 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 GABRR2P28476 465 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 LBX1P52954 281 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 ERVFC1P60507 584 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 GALNT3Q14435 633 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 FAM214AQ32MH5 1076 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 CYBRD1Q53TN4 286 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 MZT2AQ6P582 158 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 R3HCC1LQ7Z5L2 792 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 SLC41A1Q8IVJ1 513 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 PLPP7Q8NBV4 271 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 LPCAT1Q8NF37 534 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 OR9I1Q8NGQ6 314 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 NDNFQ8TB73 568 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 METTL6Q8TCB7 284 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 MCOLN3Q8TDD5 553 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 BADQ92934 168 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 TMEM80Q96HE8 168 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 RADILQ96JH8 1075 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 FRMD6Q96NE9 622 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 UHRF1Q96T88 793 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 MFSD1Q9H3U5 465 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 KLHL9Q9P2J3 617 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 EXTL2Q9UBQ6 330 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 LHX3Q9UBR4 397 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 FBXO5Q9UKT4 447 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 MAU2Q9Y6X3 613 aa7.76□□□□□ -1.17
PDLIM5-221ENST00000542407 FAM95CA0A1B0GW59 222 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 HIDE1A8MVS5 230 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 PLK4O00444 970 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 CCL22O00626 93 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 TRIM24O15164 1050 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 TBL1XO60907 577 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 CDK14O94921 469 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 CPNE6O95741 557 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 C1RP00736 705 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 FGBP02675 491 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 RNF224P0DH78 156 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 ANXA8P13928 327 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 ITIH1P19827 911 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 CAPN3P20807 821 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 OXTRP30559 389 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 AVPR1AP37288 418 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 CCR2P41597 374 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 CASP3P42574 277 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 PCDH1Q08174 1060 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 PRKAA1Q13131 559 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 PPIGQ13427 754 aaKnown RBP eCLIP7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 CYP51A1Q16850 503 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 TCTE1Q5JU00 501 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 INTS11Q5TA45 600 aaKnown RBP7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 ANXA8L1Q5VT79 327 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 XAF1Q6GPH4 301 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 HTR3DQ70Z44 454 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 CILP2Q8IUL8 1156 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 PACRGLQ8N7B6 248 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 PNPLA1Q8N8W4 532 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 SRFBP1Q8NEF9 429 aaKnown RBP7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 ST8SIA2Q92186 375 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 ELMO1Q92556 727 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 CENPNQ96H22 339 aaPredicted RBP7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 TXNDC15Q96J42 360 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 SPON2Q9BUD6 331 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 OR2B2Q9GZK3 357 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 CD320Q9NPF0 282 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 THG1LQ9NWX6 298 aaKnown RBP7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 MARCH4Q9P2E8 410 aaPredicted RBP7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 HCN2Q9UL51 889 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 ANKRD6Q9Y2G4 727 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 INSL6Q9Y581 213 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 ARL5AQ9Y689 179 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 C9JVG2 144 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 INSIG1O15503 277 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 CXCL14O95715 111 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 NDST3O95803 873 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 C8AP07357 584 aa7.75□□□□□ -1.17
PDLIM5-221ENST00000542407 SERPINF2P08697 491 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms