RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 NXNL1Q96CM4 212 aa13.15□□□□□ -0.3
TNFSF13B-206ENST00000542136 MRRFQ96E11 262 aaKnown RBP13.15□□□□□ -0.3
TNFSF13B-206ENST00000542136 SEC16BQ96JE7 1060 aa13.15□□□□□ -0.3
TNFSF13B-206ENST00000542136 GPR78Q96P69 363 aa13.15□□□□□ -0.3
TNFSF13B-206ENST00000542136 UBL7Q96S82 380 aaPredicted RBP13.15□□□□□ -0.3
TNFSF13B-206ENST00000542136 SLC26A1Q9H2B4 701 aa13.15□□□□□ -0.3
TNFSF13B-206ENST00000542136 WDR54Q9H977 334 aa13.15□□□□□ -0.3
TNFSF13B-206ENST00000542136 PELI2Q9HAT8 420 aa13.15□□□□□ -0.3
TNFSF13B-206ENST00000542136 IRAK4Q9NWZ3 460 aa13.15□□□□□ -0.3
TNFSF13B-206ENST00000542136 NUDT4Q9NZJ9 180 aa13.15□□□□□ -0.3
TNFSF13B-206ENST00000542136 CDC14AQ9UNH5 594 aa13.15□□□□□ -0.3
TNFSF13B-206ENST00000542136 SLC22A14Q9Y267 594 aa13.15□□□□□ -0.3
TNFSF13B-206ENST00000542136 PADI2Q9Y2J8 665 aa13.15□□□□□ -0.3
TNFSF13B-206ENST00000542136 HAT1O14929 419 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 TAPBPO15533 448 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 KLK8O60259 260 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 STK16O75716 305 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 S100BP04271 92 aaPredicted RBP13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 CTSBP07858 339 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 RBP1P09455 135 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 SPTBP11277 2137 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 CDH1P12830 882 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 CXCR2P25025 360 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 GSTM2P28161 218 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 GCAP28676 217 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 AHRP35869 848 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 SRSF6Q13247 344 aaKnown RBP13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 PWP1Q13610 501 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 NCF4Q15080 339 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 UGT8Q16880 541 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 MRPL14Q6P1L8 145 aaKnown RBP13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 FAM198BQ6UWH4 519 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 TTLL10Q6ZVT0 673 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 OVCH1Q7RTY7 1134 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 ADCK2Q7Z695 626 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 CSNK1A1LQ8N752 337 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 ACMSDQ8TDX5 336 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 UBTD2Q8WUN7 234 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 SLC5A11Q8WWX8 675 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 THAP4Q8WY91 577 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 CRELD1Q96HD1 420 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 IP6K3Q96PC2 410 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 CD244Q9BZW8 370 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 ACTL8Q9H568 366 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 ALG9Q9H6U8 611 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 NT5DC2Q9H857 520 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 CD274Q9NZQ7 290 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 COPG2Q9UBF2 871 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 DHCR7Q9UBM7 475 aaKnown RBP13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 TCFL5Q9UL49 500 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 TMCO1Q9UM00 188 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 DYRK1BQ9Y463 629 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 CFAP47Q6ZTR5 3102 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 ANKRD12Q6UB98 2062 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 SEC16AO15027 2179 aa13.14□□□□□ -0.31
TNFSF13B-206ENST00000542136 IQANK1A0A1B0GTG1 560 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 TRIM49D1C9J1S8 452 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 MAP2K7O14733 419 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 PRPF4O43172 522 aaKnown RBP eCLIP13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 NRP2O60462 931 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 H2AFYO75367 372 aaKnown RBP13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 KLF7O75840 302 aaPredicted RBP13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 MTHFD2P13995 350 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 ALAS2P22557 587 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 CASP2P42575 452 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 ALDH18A1P54886 795 aaKnown RBP13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 CDC20Q12834 499 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 CDC16Q13042 620 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 E2F2Q14209 437 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 NDUFA9Q16795 377 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 ATG9BQ674R7 924 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 LCN10Q6JVE6 187 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 NIPAL1Q6NVV3 410 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 EMBQ6PCB8 327 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 NXPE4Q6UWF7 544 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 SLCO4C1Q6ZQN7 724 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 TDRPQ86YL5 185 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 MFSD9Q8NBP5 474 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 CAMKVQ8NCB2 501 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 TRPV3Q8NET8 790 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 KCTD4Q8WVF5 259 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 TTC9Q92623 222 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 ALKBH8Q96BT7 664 aaKnown RBP13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 WDR34Q96EX3 536 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 AIF1LQ9BQI0 150 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 ABCF3Q9NUQ8 709 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 DNAJC11Q9NVH1 559 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 IFT80Q9P2H3 777 aaPredicted RBP13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 PSMC3IPQ9P2W1 217 aaPredicted RBP13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 GPN3Q9UHW5 284 aaPredicted RBP13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 NXT1Q9UKK6 140 aaKnown RBP13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 SH2B3Q9UQQ2 575 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 TNPO3Q9Y5L0 923 aaKnown RBP13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 SLC22A7Q9Y694 548 aa13.13□□□□□ -0.31
TNFSF13B-206ENST00000542136 NKX2-8O15522 239 aa13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 LCMT2O60294 686 aaKnown RBP13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 KATNA1O75449 491 aa13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 RFPL1O75677 317 aa13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 WDR47O94967 919 aa13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 EIF2S1P05198 315 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms