RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 TBCCQ15814 346 aa17.97■□□□□ 0.47
VPS33A-205ENST00000541169 PAGE2BQ5JRK9 111 aa17.97■□□□□ 0.47
VPS33A-205ENST00000541169 ATG9BQ674R7 924 aa17.97■□□□□ 0.47
VPS33A-205ENST00000541169 RHBDD2Q6NTF9 364 aa17.97■□□□□ 0.47
VPS33A-205ENST00000541169 CYP4X1Q8N118 509 aa17.97■□□□□ 0.47
VPS33A-205ENST00000541169 UBE2E3Q969T4 207 aa17.97■□□□□ 0.47
VPS33A-205ENST00000541169 KIAA1143Q96AT1 154 aaPredicted RBP17.97■□□□□ 0.47
VPS33A-205ENST00000541169 CLIP3Q96DZ5 547 aa17.97■□□□□ 0.47
VPS33A-205ENST00000541169 WDR34Q96EX3 536 aa17.97■□□□□ 0.47
VPS33A-205ENST00000541169 PTCD3Q96EY7 689 aaKnown RBP17.97■□□□□ 0.47
VPS33A-205ENST00000541169 PGM2Q96G03 612 aa17.97■□□□□ 0.47
VPS33A-205ENST00000541169 MAGEB10Q96LZ2 347 aaPredicted RBP17.97■□□□□ 0.47
VPS33A-205ENST00000541169 OR2A5Q96R48 311 aa17.97■□□□□ 0.47
VPS33A-205ENST00000541169 SMC6Q96SB8 1091 aa17.97■□□□□ 0.47
VPS33A-205ENST00000541169 RUFY1Q96T51 708 aa17.97■□□□□ 0.47
VPS33A-205ENST00000541169 NT5DC2Q9H857 520 aa17.97■□□□□ 0.47
VPS33A-205ENST00000541169 CUEDC1Q9NWM3 386 aaPredicted RBP17.97■□□□□ 0.47
VPS33A-205ENST00000541169 A0A0J9YVX5 310 aa17.96■□□□□ 0.47
VPS33A-205ENST00000541169 GOLGA8RI6L899 631 aa17.96■□□□□ 0.47
VPS33A-205ENST00000541169 ZNF749O43361 778 aa17.96■□□□□ 0.47
VPS33A-205ENST00000541169 PIM1P11309 404 aaPredicted RBP17.96■□□□□ 0.47
VPS33A-205ENST00000541169 AGXTP21549 392 aa17.96■□□□□ 0.47
VPS33A-205ENST00000541169 GMPRP36959 345 aa17.96■□□□□ 0.47
VPS33A-205ENST00000541169 CASP2P42575 452 aa17.96■□□□□ 0.47
VPS33A-205ENST00000541169 GDF5P43026 501 aa17.96■□□□□ 0.47
VPS33A-205ENST00000541169 HIST2H2ACQ16777 129 aaPredicted RBP17.96■□□□□ 0.47
VPS33A-205ENST00000541169 BROXQ5VW32 411 aa17.96■□□□□ 0.47
VPS33A-205ENST00000541169 HIST2H2AA3Q6FI13 130 aa17.96■□□□□ 0.47
VPS33A-205ENST00000541169 NIPAL1Q6NVV3 410 aa17.96■□□□□ 0.47
VPS33A-205ENST00000541169 SLCO4C1Q6ZQN7 724 aa17.96■□□□□ 0.47
VPS33A-205ENST00000541169 HOMEZQ8IX15 550 aa17.96■□□□□ 0.47
VPS33A-205ENST00000541169 SNX31Q8N9S9 440 aa17.96■□□□□ 0.47
VPS33A-205ENST00000541169 CAMKVQ8NCB2 501 aa17.96■□□□□ 0.47
VPS33A-205ENST00000541169 TRPV3Q8NET8 790 aa17.96■□□□□ 0.47
VPS33A-205ENST00000541169 MVB12AQ96EY5 273 aa17.96■□□□□ 0.47
VPS33A-205ENST00000541169 C1QTNF3Q9BXJ4 246 aa17.96■□□□□ 0.47
VPS33A-205ENST00000541169 TXLNGQ9NUQ3 528 aa17.96■□□□□ 0.47
VPS33A-205ENST00000541169 ZNF358Q9NW07 568 aa17.96■□□□□ 0.47
VPS33A-205ENST00000541169 TMEM216Q9P0N5 145 aa17.96■□□□□ 0.47
VPS33A-205ENST00000541169 COPG2Q9UBF2 871 aa17.96■□□□□ 0.47
VPS33A-205ENST00000541169 A0A087WV48 116 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 H0YGG7 62 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 TK2O00142 265 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 HAT1O14929 419 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 RAD1O60671 282 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 SLC35G6P0C7Q6 338 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 ATP5F1P24539 256 aaPredicted RBP17.95■□□□□ 0.46
VPS33A-205ENST00000541169 SERPINB1P30740 379 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 VSX2P58304 361 aaPredicted RBP17.95■□□□□ 0.46
VPS33A-205ENST00000541169 ARF3P61204 181 aaPredicted RBP17.95■□□□□ 0.46
VPS33A-205ENST00000541169 SKP1P63208 163 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 PWP1Q13610 501 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 E2F2Q14209 437 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 NDUFA9Q16795 377 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 MUM1Q2TAK8 710 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 DEFB110Q30KQ9 67 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 WASHC2DQ5SRD0 308 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 CEP85LQ5SZL2 805 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 TMPRSS11BQ86T26 416 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 ZFAND4Q86XD8 727 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 CACNA2D3Q8IZS8 1091 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 TMEM151AQ8N4L1 468 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 IL22RA1Q8N6P7 574 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 MFSD9Q8NBP5 474 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 PMEPA1Q969W9 287 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 APOPT1Q96IL0 206 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 ZIM3Q96PE6 472 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 SSU72Q9NP77 194 aaKnown RBP17.95■□□□□ 0.46
VPS33A-205ENST00000541169 ADGRE2Q9UHX3 823 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 KCND3Q9UK17 655 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 CDC14AQ9UNH5 594 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 STK38LQ9Y2H1 464 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 PCDHGA4Q9Y5G9 962 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 ACTL7BQ9Y614 415 aa17.95■□□□□ 0.46
VPS33A-205ENST00000541169 AKAP13Q12802 2813 aa17.94■□□□□ 0.46
VPS33A-205ENST00000541169 HYKKA2RU49 373 aa17.94■□□□□ 0.46
VPS33A-205ENST00000541169 URADA6NGE7 173 aa17.94■□□□□ 0.46
VPS33A-205ENST00000541169 C21orf140B9A014 251 aa17.94■□□□□ 0.46
VPS33A-205ENST00000541169 MEN1O00255 615 aa17.94■□□□□ 0.46
VPS33A-205ENST00000541169 PRPF4O43172 522 aaKnown RBP eCLIP17.94■□□□□ 0.46
VPS33A-205ENST00000541169 TLX3O43711 291 aaPredicted RBP17.94■□□□□ 0.46
VPS33A-205ENST00000541169 HERVK_113P63132 956 aa17.94■□□□□ 0.46
VPS33A-205ENST00000541169 YBX1P67809 324 aaKnown RBP17.94■□□□□ 0.46
VPS33A-205ENST00000541169 REEP5Q00765 189 aa17.94■□□□□ 0.46
VPS33A-205ENST00000541169 IRF8Q02556 426 aa17.94■□□□□ 0.46
VPS33A-205ENST00000541169 PRTGQ2VWP7 1150 aa17.94■□□□□ 0.46
VPS33A-205ENST00000541169 XKR6Q5GH73 641 aa17.94■□□□□ 0.46
VPS33A-205ENST00000541169 C10orf62Q5T681 223 aaPredicted RBP17.94■□□□□ 0.46
VPS33A-205ENST00000541169 LIPJQ5W064 366 aa17.94■□□□□ 0.46
VPS33A-205ENST00000541169 PRMT9Q6P2P2 845 aa17.94■□□□□ 0.46
VPS33A-205ENST00000541169 TMIGD1Q6UXZ0 262 aa17.94■□□□□ 0.46
VPS33A-205ENST00000541169 ZNF517Q6ZMY9 492 aaPredicted RBP17.94■□□□□ 0.46
VPS33A-205ENST00000541169 SRRM1Q8IYB3 904 aaKnown RBP17.94■□□□□ 0.46
VPS33A-205ENST00000541169 CSNK1A1LQ8N752 337 aa17.94■□□□□ 0.46
VPS33A-205ENST00000541169 PTGR2Q8N8N7 351 aaPredicted RBP17.94■□□□□ 0.46
VPS33A-205ENST00000541169 NKD1Q969G9 470 aa17.94■□□□□ 0.46
VPS33A-205ENST00000541169 ERVK-6Q9BXR3 956 aa17.94■□□□□ 0.46
VPS33A-205ENST00000541169 GPR87Q9BY21 358 aa17.94■□□□□ 0.46
VPS33A-205ENST00000541169 SPRTNQ9H040 489 aaPredicted RBP17.94■□□□□ 0.46
VPS33A-205ENST00000541169 ZFP69BQ9UJL9 534 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms