RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 HSP90B2PQ58FF3 399 aa16.8■□□□□ 0.28
CLSTN3-210ENST00000540931 CFAP157Q5JU67 520 aa16.8■□□□□ 0.28
CLSTN3-210ENST00000540931 LIPMQ5VYY2 423 aa16.8■□□□□ 0.28
CLSTN3-210ENST00000540931 GTF2H2CQ6P1K8 395 aa16.8■□□□□ 0.28
CLSTN3-210ENST00000540931 MCATQ8IVS2 390 aaKnown RBP16.8■□□□□ 0.28
CLSTN3-210ENST00000540931 BMPERQ8N8U9 685 aa16.8■□□□□ 0.28
CLSTN3-210ENST00000540931 TTC29Q8NA56 475 aaPredicted RBP16.8■□□□□ 0.28
CLSTN3-210ENST00000540931 TRPV3Q8NET8 790 aa16.8■□□□□ 0.28
CLSTN3-210ENST00000540931 NEIL2Q969S2 332 aa16.8■□□□□ 0.28
CLSTN3-210ENST00000540931 ATP6V1G3Q96LB4 118 aa16.8■□□□□ 0.28
CLSTN3-210ENST00000540931 PRAP1Q96NZ9 151 aa16.8■□□□□ 0.28
CLSTN3-210ENST00000540931 OR4K3Q96R72 315 aa16.8■□□□□ 0.28
CLSTN3-210ENST00000540931 SELENOSQ9BQE4 189 aa16.8■□□□□ 0.28
CLSTN3-210ENST00000540931 OXSMQ9NWU1 459 aa16.8■□□□□ 0.28
CLSTN3-210ENST00000540931 NKIRAS1Q9NYS0 192 aa16.8■□□□□ 0.28
CLSTN3-210ENST00000540931 DKK4Q9UBT3 224 aa16.8■□□□□ 0.28
CLSTN3-210ENST00000540931 PISDQ9UG56 409 aa16.8■□□□□ 0.28
CLSTN3-210ENST00000540931 PCDHB3Q9Y5E6 796 aa16.8■□□□□ 0.28
CLSTN3-210ENST00000540931 AK5Q9Y6K8 562 aa16.8■□□□□ 0.28
CLSTN3-210ENST00000540931 FAM149AA5PLN7 773 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 E7EQ34 232 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 TAF4O00268 1085 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 BIRC5O15392 142 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 ZSCAN9O15535 394 aaPredicted RBP16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 DLX3O60479 287 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 TRIM13O60858 407 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 TNFSF15O95150 251 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 RPS17P08708 135 aaKnown RBP16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 CDH1P12830 882 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 EEF1DP29692 281 aaKnown RBP16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 GDF5P43026 501 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 CSNK1G2P78368 415 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 PHEXP78562 749 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 E2F2Q14209 437 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 GRM7Q14831 915 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 XKR6Q5GH73 641 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 GARNL3Q5VVW2 1013 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 FCRL6Q6DN72 434 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 C16orf46Q6P387 395 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 CDHR3Q6ZTQ4 885 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 TRIM73Q86UV7 250 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 TEX9Q8N6V9 391 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 CAMKVQ8NCB2 501 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 TLCD1Q96CP7 247 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 ZNF501Q96CX3 271 aaPredicted RBP16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 SH3GL2Q99962 352 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 DPH2Q9BQC3 489 aaPredicted RBP16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 NTMT1Q9BV86 223 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 SLC7A5P2Q9GIP4 190 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 IPPKQ9H8X2 491 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 SLC6A20Q9NP91 592 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 KCNK9Q9NPC2 374 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 PILRAQ9UKJ1 303 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 ACSL6Q9UKU0 697 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 TSC22D4Q9Y3Q8 395 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 PCDHGA11Q9Y5H2 935 aa16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 COL27A1Q8IZC6 1860 aaPredicted RBP16.79■□□□□ 0.28
CLSTN3-210ENST00000540931 TRABD2BA6NFA1 517 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 TMEM150CB9EJG8 249 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 E2F3O00716 465 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 OR2B3O76000 313 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 SUPT7LO94864 414 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 CD63P08962 238 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 SBK3P0C264 359 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 SLC35G6P0C7Q6 338 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 EBLN1P0CF75 366 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 PVRP15151 417 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 FOLR1P15328 257 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 GMPRP36959 345 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 CCNG1P51959 295 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 MAPK10P53779 464 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 PKNOX1P55347 436 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 MAGOHP61326 146 aaKnown RBP16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 ZNF33BQ06732 778 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 PWP1Q13610 501 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 MAP7Q14244 749 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 NDUFA9Q16795 377 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 ZXDCQ2QGD7 858 aaPredicted RBP16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 ZNF678Q5SXM1 525 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 TMIGD1Q6UXZ0 262 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 SLCO4C1Q6ZQN7 724 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 TMPRSS11BQ86T26 416 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 ARMC2Q8NEN0 867 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 CNDP1Q96KN2 507 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 ZNF285Q96NJ3 590 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 FAM111AQ96PZ2 611 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 NRTNQ99748 197 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 C17orf62Q9BQA9 187 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 ACTR8Q9H981 624 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 IRAK4Q9NWZ3 460 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 OCIAD1Q9NX40 245 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 PCTPQ9UKL6 214 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 EMCNQ9ULC0 261 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 NBEAQ8NFP9 2946 aa16.78■□□□□ 0.28
CLSTN3-210ENST00000540931 ITPR1Q14643 2758 aa16.77■□□□□ 0.28
CLSTN3-210ENST00000540931 IGKV1-8A0A0C4DH67 115 aa16.77■□□□□ 0.28
CLSTN3-210ENST00000540931 G3V2L1 256 aa16.77■□□□□ 0.28
CLSTN3-210ENST00000540931 AGPSO00116 658 aa16.77■□□□□ 0.28
CLSTN3-210ENST00000540931 CPNE3O75131 537 aaKnown RBP16.77■□□□□ 0.28
CLSTN3-210ENST00000540931 SPAG7O75391 227 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms