RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 CWF19L1Q69YN2 538 aaKnown RBP23.59■■□□□ 1.37
TTC3-225ENST00000540756 IYDQ6PHW0 289 aa23.59■■□□□ 1.37
TTC3-225ENST00000540756 ARMCX6Q7L4S7 300 aa23.59■■□□□ 1.37
TTC3-225ENST00000540756 HOMEZQ8IX15 550 aa23.59■■□□□ 1.37
TTC3-225ENST00000540756 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.59■■□□□ 1.37
TTC3-225ENST00000540756 C1orf52Q8N6N3 182 aaKnown RBP23.59■■□□□ 1.37
TTC3-225ENST00000540756 LCN9Q8WX39 176 aa23.59■■□□□ 1.37
TTC3-225ENST00000540756 REPS1Q96D71 796 aa23.59■■□□□ 1.37
TTC3-225ENST00000540756 PCBD2Q9H0N5 130 aa23.59■■□□□ 1.37
TTC3-225ENST00000540756 RASSF4Q9H2L5 321 aa23.59■■□□□ 1.37
TTC3-225ENST00000540756 ADA2Q9NZK5 511 aa23.59■■□□□ 1.37
TTC3-225ENST00000540756 GMPR2Q9P2T1 348 aaKnown RBP23.59■■□□□ 1.37
TTC3-225ENST00000540756 CROTQ9UKG9 612 aa23.59■■□□□ 1.37
TTC3-225ENST00000540756 KLHL20Q9Y2M5 609 aa23.59■■□□□ 1.37
TTC3-225ENST00000540756 SPEGQ15772 3267 aa23.59■■□□□ 1.37
TTC3-225ENST00000540756 TBX6O95947 436 aaPredicted RBP23.59■■□□□ 1.37
TTC3-225ENST00000540756 CYP4F2P78329 520 aa23.59■■□□□ 1.37
TTC3-225ENST00000540756 ZXDAP98168 799 aa23.59■■□□□ 1.37
TTC3-225ENST00000540756 PRDX1Q06830 199 aaKnown RBP23.59■■□□□ 1.37
TTC3-225ENST00000540756 FAM174BQ3ZCQ3 159 aa23.59■■□□□ 1.37
TTC3-225ENST00000540756 PRRT3Q5FWE3 981 aa23.59■■□□□ 1.37
TTC3-225ENST00000540756 SPANXN4Q5MJ08 99 aa23.59■■□□□ 1.37
TTC3-225ENST00000540756 WASHC2DQ5SRD0 308 aa23.59■■□□□ 1.37
TTC3-225ENST00000540756 TAF8Q7Z7C8 310 aa23.59■■□□□ 1.37
TTC3-225ENST00000540756 FBXL6Q8N531 539 aa23.59■■□□□ 1.37
TTC3-225ENST00000540756 EEDO75530 441 aaKnown RBP23.58■■□□□ 1.37
TTC3-225ENST00000540756 HSD3B1P14060 373 aa23.58■■□□□ 1.37
TTC3-225ENST00000540756 HOXB3P14651 431 aaPredicted RBP23.58■■□□□ 1.37
TTC3-225ENST00000540756 JUNDP17535 347 aa23.58■■□□□ 1.37
TTC3-225ENST00000540756 TCN1P20061 433 aaPredicted RBP23.58■■□□□ 1.37
TTC3-225ENST00000540756 HSD3B2P26439 372 aa23.58■■□□□ 1.37
TTC3-225ENST00000540756 CCR8P51685 355 aa23.58■■□□□ 1.37
TTC3-225ENST00000540756 LAPTM5Q13571 262 aa23.58■■□□□ 1.37
TTC3-225ENST00000540756 ZNF423Q2M1K9 1284 aa23.58■■□□□ 1.37
TTC3-225ENST00000540756 NET1Q7Z628 596 aaPredicted RBP23.58■■□□□ 1.37
TTC3-225ENST00000540756 AMIGO1Q86WK6 493 aa23.58■■□□□ 1.37
TTC3-225ENST00000540756 MFSD2AQ8NA29 543 aa23.58■■□□□ 1.37
TTC3-225ENST00000540756 PCYOX1LQ8NBM8 494 aa23.58■■□□□ 1.37
TTC3-225ENST00000540756 FCRL1Q96LA6 429 aa23.58■■□□□ 1.37
TTC3-225ENST00000540756 LRRC61Q9BV99 259 aa23.58■■□□□ 1.37
TTC3-225ENST00000540756 RAB11FIP5Q9BXF6 653 aa23.58■■□□□ 1.37
TTC3-225ENST00000540756 CLMPQ9H6B4 373 aa23.58■■□□□ 1.37
TTC3-225ENST00000540756 NDE1Q9NXR1 346 aa23.58■■□□□ 1.37
TTC3-225ENST00000540756 PPT2Q9UMR5 302 aa23.58■■□□□ 1.37
TTC3-225ENST00000540756 PRPF19Q9UMS4 504 aaKnown RBP23.58■■□□□ 1.37
TTC3-225ENST00000540756 POMPQ9Y244 141 aa23.58■■□□□ 1.37
TTC3-225ENST00000540756 TMED5Q9Y3A6 229 aa23.58■■□□□ 1.37
TTC3-225ENST00000540756 PCDHB11Q9Y5F2 797 aa23.58■■□□□ 1.37
TTC3-225ENST00000540756 BTN3A3O00478 584 aa23.57■■□□□ 1.36
TTC3-225ENST00000540756 LCMT2O60294 686 aaKnown RBP23.57■■□□□ 1.36
TTC3-225ENST00000540756 CIB2O75838 187 aa23.57■■□□□ 1.36
TTC3-225ENST00000540756 B3GALT4O96024 378 aa23.57■■□□□ 1.36
TTC3-225ENST00000540756 GBAP04062 536 aa23.57■■□□□ 1.36
TTC3-225ENST00000540756 CTSEP14091 401 aa23.57■■□□□ 1.36
TTC3-225ENST00000540756 CSNK1G2P78368 415 aa23.57■■□□□ 1.36
TTC3-225ENST00000540756 ACSM2AQ08AH3 577 aa23.57■■□□□ 1.36
TTC3-225ENST00000540756 ACSM2BQ68CK6 577 aa23.57■■□□□ 1.36
TTC3-225ENST00000540756 OR4K1Q8NGD4 311 aa23.57■■□□□ 1.36
TTC3-225ENST00000540756 TSPEARQ8WU66 669 aa23.57■■□□□ 1.36
TTC3-225ENST00000540756 CHTF18Q8WVB6 975 aa23.57■■□□□ 1.36
TTC3-225ENST00000540756 GSDMCQ9BYG8 508 aa23.57■■□□□ 1.36
TTC3-225ENST00000540756 PELI2Q9HAT8 420 aa23.57■■□□□ 1.36
TTC3-225ENST00000540756 TM9SF3Q9HD45 589 aa23.57■■□□□ 1.36
TTC3-225ENST00000540756 SLC6A20Q9NP91 592 aa23.57■■□□□ 1.36
TTC3-225ENST00000540756 NKX1-2Q9UD57 310 aaPredicted RBP23.57■■□□□ 1.36
TTC3-225ENST00000540756 APOBEC3BQ9UH17 382 aaKnown RBP23.57■■□□□ 1.36
TTC3-225ENST00000540756 THADAQ6YHU6 1953 aa23.57■■□□□ 1.36
TTC3-225ENST00000540756 FOXE1O00358 373 aaPredicted RBP23.57■■□□□ 1.36
TTC3-225ENST00000540756 PHC1P78364 1004 aa23.57■■□□□ 1.36
TTC3-225ENST00000540756 GPR18Q14330 331 aa23.57■■□□□ 1.36
TTC3-225ENST00000540756 HACD2Q6Y1H2 254 aa23.57■■□□□ 1.36
TTC3-225ENST00000540756 ADCK2Q7Z695 626 aa23.57■■□□□ 1.36
TTC3-225ENST00000540756 NAGSQ8N159 534 aa23.57■■□□□ 1.36
TTC3-225ENST00000540756 KRT78Q8N1N4 520 aa23.57■■□□□ 1.36
TTC3-225ENST00000540756 C1orf216Q8TAB5 229 aa23.57■■□□□ 1.36
TTC3-225ENST00000540756 ROPN1LQ96C74 230 aa23.57■■□□□ 1.36
TTC3-225ENST00000540756 LRRC58Q96CX6 371 aa23.57■■□□□ 1.36
TTC3-225ENST00000540756 GPATCH1Q9BRR8 931 aaKnown RBP23.57■■□□□ 1.36
TTC3-225ENST00000540756 TECTAO75443 2155 aa23.57■■□□□ 1.36
TTC3-225ENST00000540756 MDC1Q14676 2089 aaKnown RBP23.56■■□□□ 1.36
TTC3-225ENST00000540756 H0Y3Z8 333 aa23.56■■□□□ 1.36
TTC3-225ENST00000540756 AKAP10O43572 662 aa23.56■■□□□ 1.36
TTC3-225ENST00000540756 CHRM5P08912 532 aaPredicted RBP23.56■■□□□ 1.36
TTC3-225ENST00000540756 XRCC1P18887 633 aaPredicted RBP23.56■■□□□ 1.36
TTC3-225ENST00000540756 HNRNPH1P31943 449 aaKnown RBP23.56■■□□□ 1.36
TTC3-225ENST00000540756 SLC7A2P52569 658 aa23.56■■□□□ 1.36
TTC3-225ENST00000540756 CLDN8P56748 225 aa23.56■■□□□ 1.36
TTC3-225ENST00000540756 NFYCQ13952 458 aa23.56■■□□□ 1.36
TTC3-225ENST00000540756 SPACA7Q96KW9 195 aa23.56■■□□□ 1.36
TTC3-225ENST00000540756 AIF1LQ9BQI0 150 aa23.56■■□□□ 1.36
TTC3-225ENST00000540756 NUP214P35658 2090 aaPredicted RBP23.56■■□□□ 1.36
TTC3-225ENST00000540756 TLR4O00206 839 aa23.55■■□□□ 1.36
TTC3-225ENST00000540756 PRPS2P11908 318 aa23.55■■□□□ 1.36
TTC3-225ENST00000540756 ATXN3P54252 364 aaPredicted RBP23.55■■□□□ 1.36
TTC3-225ENST00000540756 RACK1P63244 317 aaKnown RBP23.55■■□□□ 1.36
TTC3-225ENST00000540756 REEP5Q00765 189 aa23.55■■□□□ 1.36
TTC3-225ENST00000540756 MS4A2Q01362 244 aa23.55■■□□□ 1.36
TTC3-225ENST00000540756 KIAA1614Q5VZ46 1190 aa23.55■■□□□ 1.36
TTC3-225ENST00000540756 ADGRF3Q8IZF5 1079 aa23.55■■□□□ 1.36
TTC3-225ENST00000540756 OR2L3Q8NG85 312 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms