RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 TFF3Q07654 80 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 GTF3C1Q12789 2109 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 ARHGAP19Q14CB8 494 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 OASLQ15646 514 aaKnown RBP6.9□□□□□ -1.3
YBX3-209ENST00000540747 LONRF1Q17RB8 773 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 FASTKD1Q53R41 847 aaKnown RBP6.9□□□□□ -1.3
YBX3-209ENST00000540747 AARS2Q5JTZ9 985 aaKnown RBP6.9□□□□□ -1.3
YBX3-209ENST00000540747 RNFT1Q5M7Z0 435 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 ACER2Q5QJU3 275 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 LRRC8BQ6P9F7 803 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 LANCL3Q6ZV70 420 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 VN1R4Q7Z5H5 301 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 PCGF5Q86SE9 256 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 LRRC6Q86X45 466 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 DOLPP1Q86YN1 238 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 LRRC56Q8IYG6 542 aaPredicted RBP6.9□□□□□ -1.3
YBX3-209ENST00000540747 CCDC170Q8IYT3 715 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 MPP5Q8N3R9 675 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 OR6P1Q8NGX9 317 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 SMPDL3AQ92484 453 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 MMABQ96EY8 250 aaPredicted RBP6.9□□□□□ -1.3
YBX3-209ENST00000540747 MAGED4Q96JG8 741 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 CALR3Q96L12 384 aaKnown RBP6.9□□□□□ -1.3
YBX3-209ENST00000540747 ALS2CR12Q96Q35 445 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 TTC1Q99614 292 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 TMEM121Q9BTD3 319 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 LACRTQ9GZZ8 138 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 DRC3Q9H069 523 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 ETNK1Q9HBU6 452 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 MKL2Q9ULH7 1088 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 ASB1Q9Y576 335 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 MRFAP1Q9Y605 127 aa6.9□□□□□ -1.3
YBX3-209ENST00000540747 VPS13CQ709C8 3753 aa6.9□□□□□ -1.31
YBX3-209ENST00000540747 PRRC2AP48634 2157 aaKnown RBP6.89□□□□□ -1.31
YBX3-209ENST00000540747 INTS1Q8N201 2190 aaKnown RBP6.89□□□□□ -1.31
YBX3-209ENST00000540747 IGHV3-20A0A0C4DH32 117 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 E9PLN8 166 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 H0YIG0 161 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 HAT1O14929 419 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 KPNA5O15131 536 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 CD3EAPO15446 510 aaKnown RBP6.89□□□□□ -1.31
YBX3-209ENST00000540747 ASNA1O43681 348 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 VPS26AO75436 327 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 PSIP1O75475 530 aaKnown RBP6.89□□□□□ -1.31
YBX3-209ENST00000540747 SEC24DO94855 1032 aaPredicted RBP6.89□□□□□ -1.31
YBX3-209ENST00000540747 SLU7O95391 586 aaKnown RBP6.89□□□□□ -1.31
YBX3-209ENST00000540747 NSA2O95478 260 aaKnown RBP6.89□□□□□ -1.31
YBX3-209ENST00000540747 TPM1P09493 284 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 MYBL2P10244 700 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 ERVK-10P10266 1014 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 EZRP15311 586 aaKnown RBP6.89□□□□□ -1.31
YBX3-209ENST00000540747 HOXB4P17483 251 aaPredicted RBP6.89□□□□□ -1.31
YBX3-209ENST00000540747 TTPAP49638 278 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 ADARP55265 1226 aaKnown RBP6.89□□□□□ -1.31
YBX3-209ENST00000540747 CSNK1G2P78368 415 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 PRDX1Q06830 199 aaKnown RBP6.89□□□□□ -1.31
YBX3-209ENST00000540747 OR1C1Q15619 314 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 TYSND1Q2T9J0 566 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 ICE2Q659A1 982 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 FCRLBQ6BAA4 426 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 TTC23LQ6PF05 361 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 SUSD1Q6UWL2 747 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 PRSS41Q7RTY9 318 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 CPEB2Q7Z5Q1 589 aaKnown RBP6.89□□□□□ -1.31
YBX3-209ENST00000540747 ANKRD37Q7Z713 158 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 ZNF227Q86WZ6 799 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 CRLF3Q8IUI8 442 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 LGI4Q8N135 537 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 MARVELD2Q8N4S9 558 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 TAB3Q8N5C8 712 aaPredicted RBP6.89□□□□□ -1.31
YBX3-209ENST00000540747 FBXO15Q8NCQ5 510 aaPredicted RBP6.89□□□□□ -1.31
YBX3-209ENST00000540747 OR9A1PQ8NGU1 263 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 SUN3Q8TAQ9 357 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 AGAP11Q8TF27 550 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 ANKRD7Q92527 254 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 LPGAT1Q92604 370 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 ZNF354BQ96LW1 612 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 PANX3Q96QZ0 392 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 CYTH2Q99418 400 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 VKORC1Q9BQB6 163 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 TMUB1Q9BVT8 246 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 ACAT2Q9BWD1 397 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 TSPAN10Q9H1Z9 355 aaPredicted RBP6.89□□□□□ -1.31
YBX3-209ENST00000540747 TRIM45Q9H8W5 580 aaPredicted RBP6.89□□□□□ -1.31
YBX3-209ENST00000540747 MRPS30Q9NP92 439 aaKnown RBP6.89□□□□□ -1.31
YBX3-209ENST00000540747 MMP25Q9NPA2 562 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 NPDC1Q9NQX5 325 aaPredicted RBP6.89□□□□□ -1.31
YBX3-209ENST00000540747 CHRAC1Q9NRG0 131 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 CATSPERZQ9NTU4 200 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 TNFRSF10DQ9UBN6 386 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 TEKT2Q9UIF3 430 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 GNPTGQ9UJJ9 305 aa6.89□□□□□ -1.31
YBX3-209ENST00000540747 KCNE1BA0A087WTH5 132 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 GOLGA6L9A6NEM1 432 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 OR2W5A6NFC9 320 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 USP27XA6NNY8 438 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 E7ENX8 843 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 NPIPA5E9PKD4 350 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 CDK2AP1O14519 115 aa6.88□□□□□ -1.31
YBX3-209ENST00000540747 TXNDC9O14530 226 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms