RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 RLIMQ9NVW2 624 aa13.21□□□□□ -0.3
BNIP3-202ENST00000540159 SLC6A14Q9UN76 642 aa13.21□□□□□ -0.3
BNIP3-202ENST00000540159 SH2B3Q9UQQ2 575 aa13.21□□□□□ -0.3
BNIP3-202ENST00000540159 NUMA1Q14980 2115 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 CEP290O15078 2479 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 KCNE1BA0A087WTH5 132 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 C8AP07357 584 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 RETP07949 1114 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 ETFAP13804 333 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 HOXD10P28358 340 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 KRT20P35900 424 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 MOGQ16653 247 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 MPPE1Q53F39 396 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 HMGN2P46Q86SG4 172 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 CALHM3Q86XJ0 350 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 CROCCP3Q8IVE0 287 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 AADATQ8N5Z0 425 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 CIDECQ96AQ7 238 aaPredicted RBP13.2□□□□□ -0.3
BNIP3-202ENST00000540159 COX4I2Q96KJ9 171 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 CAPNS2Q96L46 248 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 OR4K3Q96R72 315 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 OR51B5Q9H339 312 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 TAS2R16Q9NYV7 291 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 VPS29Q9UBQ0 182 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 PLAGL1Q9UM63 463 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 TRIM17Q9Y577 477 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 WNT6Q9Y6F9 365 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 SCN8AQ9UQD0 1980 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 GABRR3A8MPY1 467 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 ZNF701M0R085 212 aaPredicted RBP13.2□□□□□ -0.3
BNIP3-202ENST00000540159 SOCS5O75159 536 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 HSMCR30P0CW71 290 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 PCMT1P22061 227 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 XPAP23025 273 aaPredicted RBP13.2□□□□□ -0.3
BNIP3-202ENST00000540159 CD6P30203 668 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 WNT3P56703 355 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 RPS13P62277 151 aaKnown RBP13.2□□□□□ -0.3
BNIP3-202ENST00000540159 TRIM16LQ309B1 348 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 HIPK1Q86Z02 1210 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 ZZZ3Q8IYH5 903 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 PJA1Q8NG27 643 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 MUL1Q969V5 352 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 FAM83DQ9H4H8 585 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 TMEM165Q9HC07 324 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 SH3GLB1Q9Y371 365 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 MAP4K5Q9Y4K4 846 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 PCDHGA10Q9Y5H3 936 aa13.2□□□□□ -0.3
BNIP3-202ENST00000540159 FUOMA2VDF0 154 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 FAM227AF5H4B4 570 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 PCDHGA12O60330 932 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 CCNDBP1O95273 360 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 HOXA9P31269 272 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 RECQLP46063 649 aaPredicted RBP13.19□□□□□ -0.3
BNIP3-202ENST00000540159 TP53BP2Q13625 1128 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 DUOXA1Q1HG43 343 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 TMEM215Q68D42 235 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 AGTRAPQ6RW13 159 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 ADCK1Q86TW2 530 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 ZNF740Q8NDX6 193 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 CMTM7Q96FZ5 175 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 TRMT2BQ96GJ1 504 aaKnown RBP13.19□□□□□ -0.3
BNIP3-202ENST00000540159 DUSP26Q9BV47 211 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 RNF208Q9H0X6 261 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 REEP1Q9H902 201 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 IL1RAPQ9NPH3 570 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 ITM2CQ9NQX7 267 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 SAMD4AQ9UPU9 718 aaKnown RBP13.19□□□□□ -0.3
BNIP3-202ENST00000540159 CFAP20Q9Y6A4 193 aaKnown RBP13.19□□□□□ -0.3
BNIP3-202ENST00000540159 LOC100506127A0A0U1RQW1 187 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 MGAT4DA6NG13 374 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 ALDH1A1P00352 501 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 HPRP00739 348 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 PTGER1P34995 402 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 SOAT1P35610 550 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 SLC19A1P41440 591 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 RPS26P62854 115 aaKnown RBP13.19□□□□□ -0.3
BNIP3-202ENST00000540159 RPP38P78345 283 aaKnown RBP13.19□□□□□ -0.3
BNIP3-202ENST00000540159 RGS21Q2M5E4 152 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 LRIF1Q5T3J3 769 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 TPGS2Q68CL5 300 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 ZNF783Q6ZMS7 281 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 FIBINQ8TAL6 211 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 TMEM159Q96B96 161 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 YME1L1Q96TA2 773 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 RDH14Q9HBH5 336 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 ENPP5Q9UJA9 477 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 WNT9AO14904 365 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 STATHP02808 62 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 PRPS2P11908 318 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 MESP2Q0VG99 397 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 RAB33AQ14088 237 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 ACOX1Q15067 660 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 TCEA2Q15560 299 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 PRSS36Q5K4E3 855 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 LY6G5CQ5SRR4 150 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 RAVER1Q8IY67 606 aaKnown RBP13.19□□□□□ -0.3
BNIP3-202ENST00000540159 SLC39A11Q8N1S5 342 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 OR2A12Q8NGT7 310 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 HUS1BQ8NHY5 278 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 NEIL2Q969S2 332 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms