RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 CHAC2Q8WUX2 184 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 ASB11Q8WXH4 323 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 CASD1Q96PB1 797 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 TTPALQ9BTX7 342 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 ZBTB20Q9HC78 741 aaPredicted RBP9.36□□□□□ -0.91
CDH13-204ENST00000539548 ZNF232Q9UNY5 417 aa9.36□□□□□ -0.91
CDH13-204ENST00000539548 MN1Q10571 1320 aaPredicted RBP9.35□□□□□ -0.91
CDH13-204ENST00000539548 CLCA1A8K7I4 914 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 ADAM12O43184 909 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 SMAD6O43541 496 aaKnown RBP9.35□□□□□ -0.91
CDH13-204ENST00000539548 NUAK1O60285 661 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 PRAMEF4O60810 478 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 SOCS5O75159 536 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 RFPL2O75678 378 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 CPSF4O95639 269 aaKnown RBP9.35□□□□□ -0.91
CDH13-204ENST00000539548 PTTG1O95997 202 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 VIPP01282 170 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 HIST1H2AGP0C0S8 130 aaPredicted RBP9.35□□□□□ -0.91
CDH13-204ENST00000539548 MPC1LP0DKB6 136 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 JUPP14923 745 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 HIST1H2ADP20671 130 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 C21orf33P30042 268 aaPredicted RBP9.35□□□□□ -0.91
CDH13-204ENST00000539548 CSKP41240 450 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 SLC19A1P41440 591 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 MAPK8P45983 427 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 TEKQ02763 1124 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 CSTF3Q12996 717 aaKnown RBP9.35□□□□□ -0.91
CDH13-204ENST00000539548 PTCHD3Q3KNS1 767 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 FBXO43Q4G163 708 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 TPRG1LQ5T0D9 272 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 C1QTNF12Q5T7M4 302 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 ATAD3BQ5T9A4 648 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 PRAMEF9Q5VWM5 478 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 TPGS1Q6ZTW0 290 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 FAM124AQ86V42 546 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 ZSWIM9Q86XI8 627 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 POC5Q8NA72 575 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 DCAF4L2Q8NA75 395 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 PCSK9Q8NBP7 692 aaKnown RBP9.35□□□□□ -0.91
CDH13-204ENST00000539548 HJURPQ8NCD3 748 aaPredicted RBP9.35□□□□□ -0.91
CDH13-204ENST00000539548 GPR26Q8NDV2 337 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 FBXO22Q8NEZ5 403 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 OR6K2Q8NGY2 324 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 GGHQ92820 318 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 TPD52L3Q96J77 140 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 HIST1H2AHQ96KK5 128 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 KCNC2Q96PR1 638 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 HIST1H2AJQ99878 128 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 DPH2Q9BQC3 489 aaPredicted RBP9.35□□□□□ -0.91
CDH13-204ENST00000539548 H2AFJQ9BTM1 129 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 CDADC1Q9BWV3 514 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 TM6SF2Q9BZW4 377 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 CHST8Q9H2A9 424 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 ELAC1Q9H777 363 aaKnown RBP9.35□□□□□ -0.91
CDH13-204ENST00000539548 TPT1P8Q9HAU6 139 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 DNAJC11Q9NVH1 559 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 ADPRHL2Q9NX46 363 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 CCDC59Q9P031 241 aaKnown RBP9.35□□□□□ -0.91
CDH13-204ENST00000539548 SPASTQ9UBP0 616 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 AFF4Q9UHB7 1163 aaKnown RBP9.35□□□□□ -0.91
CDH13-204ENST00000539548 POU2F3Q9UKI9 436 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.35□□□□□ -0.91
CDH13-204ENST00000539548 PADI2Q9Y2J8 665 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 ANAPC1Q9H1A4 1944 aa9.35□□□□□ -0.91
CDH13-204ENST00000539548 DSCR3O14972 297 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 SNPHO15079 494 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 SLC16A5O15375 505 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 YY2O15391 372 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 TBX1O43435 398 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 SUV39H1O43463 412 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 KCNK2O95069 426 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 LATS1O95835 1130 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 RPLP0P05388 317 aaKnown RBP9.34□□□□□ -0.91
CDH13-204ENST00000539548 ABCB1P08183 1280 aaPredicted RBP9.34□□□□□ -0.91
CDH13-204ENST00000539548 DBTP11182 482 aaKnown RBP9.34□□□□□ -0.91
CDH13-204ENST00000539548 COX7A2P14406 83 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 PPIBP23284 216 aaKnown RBP9.34□□□□□ -0.91
CDH13-204ENST00000539548 LIMK1P53667 647 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 CRYBA2P53672 197 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 B4GALNT1Q00973 533 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 KRR1Q13601 381 aaKnown RBP9.34□□□□□ -0.91
CDH13-204ENST00000539548 ZNF362Q5T0B9 420 aaPredicted RBP9.34□□□□□ -0.91
CDH13-204ENST00000539548 RETSATQ6NUM9 610 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 GPR153Q6NV75 609 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 AKAP14Q86UN6 197 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 PAF1Q8N7H5 531 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 ZNF513Q8N8E2 541 aaPredicted RBP9.34□□□□□ -0.91
CDH13-204ENST00000539548 KBTBD8Q8NFY9 601 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 HTRA1Q92743 480 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 PROX1Q92786 737 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 LYSMD1Q96S90 227 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 DOHHQ9BU89 302 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 FZD4Q9ULV1 537 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 CORO2BQ9UQ03 480 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 TESMINQ9Y4I5 508 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 PCDHGA3Q9Y5H0 932 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 IGLV3-16A0A075B6K0 115 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 TMEM229AB2RXF0 380 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 GFYI3L273 518 aa9.34□□□□□ -0.91
CDH13-204ENST00000539548 GFRA2O00451 464 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms