RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 RAB15P59190 212 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 DAB2P98082 770 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 RAB33AQ14088 237 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 VEPH1Q14D04 833 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 UAP1L1Q3KQV9 507 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 PLEKHG6Q3KR16 790 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 THOC7Q6I9Y2 204 aaKnown RBP12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 ZCCHC8Q6NZY4 707 aaKnown RBP12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 NEK5Q6P3R8 708 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 OR5K1Q8NHB7 308 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 CNDP2Q96KP4 475 aaKnown RBP12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 ZNF641Q96N77 438 aaPredicted RBP12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 ZNF300Q96RE9 604 aaPredicted RBP12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 EBPLQ9BY08 206 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 PRRG3Q9BZD7 231 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 RDH14Q9HBH5 336 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 ACOT13Q9NPJ3 140 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 CFAP97Q9P2B7 532 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 SLC6A14Q9UN76 642 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 KCNE1BA0A087WTH5 132 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 ASNA1O43681 348 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 GUCY1B2O75343 617 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 SRCP12931 536 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 HOXD10P28358 340 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 SERPINB10P48595 397 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 IDH2P48735 452 aaKnown RBP12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 RHOXF1Q8NHV9 184 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 SKA2Q8WVK7 121 aaPredicted RBP12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 ITPKCQ96DU7 683 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 LMLNQ96KR4 655 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 ZBTB18Q99592 522 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 ABCB8Q9NUT2 735 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 C1orf109Q9NX04 203 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 SCN3BQ9NY72 215 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 CD84Q9UIB8 345 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 UGT2A1Q9Y4X1 527 aa12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 DNMT3AQ9Y6K1 912 aaPredicted RBP12.17□□□□□ -0.46
SFSWAP-208ENST00000539506 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 SMIM30A4D0T7 59 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 RGS10O43665 173 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 AIREO43918 545 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 MTX2O75431 263 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 RFPL2O75678 378 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 CCNKO75909 580 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 CPSF4O95639 269 aaKnown RBP12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 NTRK1P04629 796 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 IL6P05231 212 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 VLDLRP98155 873 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 SPOUT1Q5T280 376 aaKnown RBP12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 ASTLQ6HA08 431 aaPredicted RBP12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 CCBE1Q6UXH8 406 aaPredicted RBP12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 CCDC80Q76M96 950 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 CALHM3Q86XJ0 350 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 CMTM8Q8IZV2 173 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 SLC39A11Q8N1S5 342 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 DNASE1L2Q92874 299 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 REXO5Q96IC2 774 aaKnown RBP12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 NEK6Q9HC98 313 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 ARL15Q9NXU5 204 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 SLC22A1O15245 554 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 PCDHGA12O60330 932 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 SOCS5O75159 536 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 CLDN9O95484 217 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 GABRR2P28476 465 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 HLA-FP30511 346 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 PPP3CCP48454 512 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 CSNK1DP48730 415 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 TGM4P49221 684 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 SLC35A2P78381 396 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 HSPA14Q0VDF9 509 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 BCL2A1Q16548 175 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 CACHD1Q5VU97 1274 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 PDE12Q6L8Q7 609 aaKnown RBP12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 SERPINA13PQ6UXR4 307 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 RNF165Q6ZSG1 346 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 TCEAL8Q8IYN2 117 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 CBARPQ8N350 705 aaPredicted RBP12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 OR2AP1Q8NGE2 309 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 S100ZQ8WXG8 99 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 ULK4Q96C45 1275 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 YIPF6Q96EC8 236 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 SCRN2Q96FV2 425 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 APIPQ96GX9 242 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 CEP44Q9C0F1 390 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 DCAF13Q9NV06 445 aaKnown RBP12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 SAMHD1Q9Y3Z3 626 aaKnown RBP12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 MYOFQ9NZM1 2061 aa12.16□□□□□ -0.46
SFSWAP-208ENST00000539506 TEX28O15482 410 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 WDR47O94967 919 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 KRT75O95678 551 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 NSG1P42857 185 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 EPHB3P54753 998 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 GPR33Q49SQ1 333 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 ECHDC3Q96DC8 303 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 NECTIN4Q96NY8 510 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 LYSMD1Q96S90 227 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 P2RY13Q9BPV8 354 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 CPPED1Q9BRF8 314 aaPredicted RBP12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 PLSCR3Q9NRY6 295 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms