RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 KIR3DL1P43629 444 aa14.08□□□□□ -0.16
CDCA3-207ENST00000538862 CXCR4P61073 352 aa14.08□□□□□ -0.16
CDCA3-207ENST00000538862 SRSF11Q05519 484 aaKnown RBP14.08□□□□□ -0.16
CDCA3-207ENST00000538862 PPP1R8Q12972 351 aaKnown RBP14.08□□□□□ -0.16
CDCA3-207ENST00000538862 DUOXA1Q1HG43 343 aa14.08□□□□□ -0.16
CDCA3-207ENST00000538862 FRG2Q64ET8 278 aa14.08□□□□□ -0.16
CDCA3-207ENST00000538862 NEK5Q6P3R8 708 aa14.08□□□□□ -0.16
CDCA3-207ENST00000538862 ERICH5Q6P6B1 374 aa14.08□□□□□ -0.16
CDCA3-207ENST00000538862 DOK6Q6PKX4 331 aa14.08□□□□□ -0.16
CDCA3-207ENST00000538862 NEK10Q6ZWH5 1172 aa14.08□□□□□ -0.16
CDCA3-207ENST00000538862 GET4Q7L5D6 327 aaPredicted RBP14.08□□□□□ -0.16
CDCA3-207ENST00000538862 SNRNP27Q8WVK2 155 aaKnown RBP14.08□□□□□ -0.16
CDCA3-207ENST00000538862 FRG2BQ96QU4 278 aa14.08□□□□□ -0.16
CDCA3-207ENST00000538862 FUNDC2Q9BWH2 189 aa14.08□□□□□ -0.16
CDCA3-207ENST00000538862 TM9SF3Q9HD45 589 aa14.08□□□□□ -0.16
CDCA3-207ENST00000538862 GPRC5BQ9NZH0 403 aa14.08□□□□□ -0.16
CDCA3-207ENST00000538862 WARS2Q9UGM6 360 aaKnown RBP14.08□□□□□ -0.16
CDCA3-207ENST00000538862 ENPP5Q9UJA9 477 aa14.08□□□□□ -0.16
CDCA3-207ENST00000538862 INTS6Q9UL03 887 aaKnown RBP14.08□□□□□ -0.16
CDCA3-207ENST00000538862 ZNF99A8MXY4 864 aaPredicted RBP14.07□□□□□ -0.16
CDCA3-207ENST00000538862 UGDHO60701 494 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 ZBTB11O95625 1053 aaPredicted RBP14.07□□□□□ -0.16
CDCA3-207ENST00000538862 IGFBP5P24593 272 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 MAPK10P53779 464 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 SLC7A9P82251 487 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 HSPA14Q0VDF9 509 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 KEAP1Q14145 624 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 ACOX1Q15067 660 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 OR4F3Q6IEY1 312 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 OR2T5Q6IEZ7 315 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 NOXRED1Q6NXP6 359 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 C16orf87Q6PH81 154 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 CRTC3Q6UUV7 619 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 ZNF551Q7Z340 670 aaPredicted RBP14.07□□□□□ -0.16
CDCA3-207ENST00000538862 BBS7Q8IWZ6 715 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 OR2T29Q8NH02 315 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 MCOLN3Q8TDD5 553 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 APOLD1Q96LR9 279 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 MYADMQ96S97 322 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 ARPC5LQ9BPX5 153 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 C11orf16Q9NQ32 467 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 RPS6KA6Q9UK32 745 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 HS3ST2Q9Y278 367 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 U3KQV3 271 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 A0A1W2PQ67 120 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 BCAS1O75363 584 aaPredicted RBP14.07□□□□□ -0.16
CDCA3-207ENST00000538862 PAPLNO95428 1278 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 HNRNPCP07910 306 aaKnown RBP eCLIP14.07□□□□□ -0.16
CDCA3-207ENST00000538862 HNRNPA1P09651 372 aaKnown RBP eCLIP14.07□□□□□ -0.16
CDCA3-207ENST00000538862 JUPP14923 745 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 JUNDP17535 347 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 GPX2P18283 190 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 GSTM4Q03013 218 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 CSTF3Q12996 717 aaKnown RBP14.07□□□□□ -0.16
CDCA3-207ENST00000538862 LIPJQ5W064 366 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 KDM4DQ6B0I6 523 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 CAPN13Q6MZZ7 669 aaPredicted RBP14.07□□□□□ -0.16
CDCA3-207ENST00000538862 LINC00299Q6ZSB3 139 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 SLC16A12Q6ZSM3 486 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 MRPS31Q92665 395 aaKnown RBP14.07□□□□□ -0.16
CDCA3-207ENST00000538862 LMLNQ96KR4 655 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 ZNF641Q96N77 438 aaPredicted RBP14.07□□□□□ -0.16
CDCA3-207ENST00000538862 CFAP97Q9P2B7 532 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 SLC22A14Q9Y267 594 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 TPRKBQ9Y3C4 175 aa14.07□□□□□ -0.16
CDCA3-207ENST00000538862 DENND4CQ5VZ89 1909 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 PTGES3LE9PB15 166 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 CLIC1O00299 241 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 FPGTO14772 594 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 XYLBO75191 536 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 NDUFS2O75306 463 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 LRATO95237 230 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 POP4O95707 220 aaKnown RBP14.06□□□□□ -0.16
CDCA3-207ENST00000538862 ANGPTL1O95841 491 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 LRG1P02750 347 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 SEMG1P04279 462 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 CKMP06732 381 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 C1SP09871 688 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 ATP1B2P14415 290 aaPredicted RBP14.06□□□□□ -0.16
CDCA3-207ENST00000538862 LHCGRP22888 699 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 HTR1BP28222 390 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 HOXA9P31269 272 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 DNAJA1P31689 397 aaKnown RBP14.06□□□□□ -0.16
CDCA3-207ENST00000538862 SPINT3P49223 89 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 C21orf58P58505 322 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 IL5RAQ01344 420 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 SEMG2Q02383 582 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 PIGFQ07326 219 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 RAPSNQ13702 412 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 VMACQ2NL98 169 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 CARD16Q5EG05 197 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 C22orf39Q6P5X5 142 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 CYP2U1Q7Z449 544 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 CYP4Z1Q86W10 505 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 OR8J2Q8NGG1 315 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 SKA2Q8WVK7 121 aaPredicted RBP14.06□□□□□ -0.16
CDCA3-207ENST00000538862 METTL2AQ96IZ6 378 aaKnown RBP14.06□□□□□ -0.16
CDCA3-207ENST00000538862 EGLN2Q96KS0 407 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 P2RY13Q9BPV8 354 aa14.06□□□□□ -0.16
CDCA3-207ENST00000538862 PAK1IP1Q9NWT1 392 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms