RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 REEP5Q00765 189 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 LAPTM5Q13571 262 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 RBBP5Q15291 538 aaKnown RBP13.6□□□□□ -0.23
CD4-208ENST00000538827 TERF2Q15554 542 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 IMPG1Q17R60 797 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 STPG1Q5TH74 334 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 KIAA1614Q5VZ46 1190 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 MED27Q6P2C8 311 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 GUSBP11Q6P575 273 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 SPESP1Q6UW49 350 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 KRT78Q8N1N4 520 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 SELENOMQ8WWX9 145 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 SEC16BQ96JE7 1060 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 PRAP1Q96NZ9 151 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 OR2A14Q96R47 310 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 EBF4Q9BQW3 602 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 DPH7Q9BTV6 452 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 KLHL25Q9H0H3 589 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 RXFP3Q9NSD7 469 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 GEMIN8Q9NWZ8 242 aaKnown RBP13.6□□□□□ -0.23
CD4-208ENST00000538827 ZNF490Q9ULM2 529 aaPredicted RBP13.6□□□□□ -0.23
CD4-208ENST00000538827 ARL2BPQ9Y2Y0 163 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 ENTPD2Q9Y5L3 495 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 DNAJC15Q9Y5T4 150 aa13.6□□□□□ -0.23
CD4-208ENST00000538827 GOLGA4Q13439 2230 aaKnown RBP13.59□□□□□ -0.23
CD4-208ENST00000538827 A0A0J9YY10 115 aa13.59□□□□□ -0.23
CD4-208ENST00000538827 SDHDO14521 159 aa13.59□□□□□ -0.23
CD4-208ENST00000538827 DUX1O43812 170 aa13.59□□□□□ -0.23
CD4-208ENST00000538827 PRICKLE3O43900 615 aaPredicted RBP13.59□□□□□ -0.23
CD4-208ENST00000538827 GLB1P16278 677 aa13.59□□□□□ -0.23
CD4-208ENST00000538827 CDH3P22223 829 aa13.59□□□□□ -0.23
CD4-208ENST00000538827 EPHA3P29320 983 aa13.59□□□□□ -0.23
CD4-208ENST00000538827 IDH3AP50213 366 aa13.59□□□□□ -0.23
CD4-208ENST00000538827 EPHA4P54764 986 aa13.59□□□□□ -0.23
CD4-208ENST00000538827 CYP4F2P78329 520 aa13.59□□□□□ -0.23
CD4-208ENST00000538827 PHEXP78562 749 aa13.59□□□□□ -0.23
CD4-208ENST00000538827 PRDX1Q06830 199 aaKnown RBP13.59□□□□□ -0.23
CD4-208ENST00000538827 SUZ12Q15022 739 aaKnown RBP13.59□□□□□ -0.23
CD4-208ENST00000538827 TBCCQ15814 346 aa13.59□□□□□ -0.23
CD4-208ENST00000538827 SLC5A12Q1EHB4 618 aa13.59□□□□□ -0.23
CD4-208ENST00000538827 UGT3A2Q3SY77 523 aa13.59□□□□□ -0.23
CD4-208ENST00000538827 AMZ1Q400G9 498 aa13.59□□□□□ -0.23
CD4-208ENST00000538827 NKAIN2Q5VXU1 208 aa13.59□□□□□ -0.23
CD4-208ENST00000538827 PIGWQ7Z7B1 504 aa13.59□□□□□ -0.23
CD4-208ENST00000538827 PLD3Q8IV08 490 aa13.59□□□□□ -0.23
CD4-208ENST00000538827 REPS1Q96D71 796 aa13.59□□□□□ -0.23
CD4-208ENST00000538827 WDR34Q96EX3 536 aa13.59□□□□□ -0.23
CD4-208ENST00000538827 TUBB1Q9H4B7 451 aa13.59□□□□□ -0.23
CD4-208ENST00000538827 EHD1Q9H4M9 534 aa13.59□□□□□ -0.23
CD4-208ENST00000538827 WDR55Q9H6Y2 383 aaPredicted RBP13.59□□□□□ -0.23
CD4-208ENST00000538827 PFDN4Q9NQP4 134 aa13.59□□□□□ -0.23
CD4-208ENST00000538827 ASH1LQ9NR48 2969 aaKnown RBP13.59□□□□□ -0.23
CD4-208ENST00000538827 FARSBQ9NSD9 589 aaKnown RBP13.59□□□□□ -0.23
CD4-208ENST00000538827 EVA1BQ9NVM1 165 aa13.59□□□□□ -0.23
CD4-208ENST00000538827 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.59□□□□□ -0.23
CD4-208ENST00000538827 POMT2Q9UKY4 750 aa13.59□□□□□ -0.23
CD4-208ENST00000538827 APOBEC2Q9Y235 224 aaKnown RBP13.59□□□□□ -0.23
CD4-208ENST00000538827 BTBD3Q9Y2F9 522 aa13.59□□□□□ -0.23
CD4-208ENST00000538827 ARID1BQ8NFD5 2236 aaPredicted RBP13.59□□□□□ -0.23
CD4-208ENST00000538827 ATP6AP2A0A1C7CYW4 349 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 FEZF1A0PJY2 475 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 E9PBE3 544 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 ZNF195O14628 629 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 HAT1O14929 419 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 NRP2O60462 931 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 KLHL41O60662 606 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 ULK1O75385 1050 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 ATP6AP2O75787 350 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 WFS1O76024 890 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 PDYNP01213 254 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 ZNF883P0CG24 379 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 PVRP15151 417 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 MAGP20916 626 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 CXCR2P25025 360 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 GRK3P35626 688 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 NEK2P51955 445 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 INHBCP55103 352 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 CSNK1G2P78368 415 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 CYP4F3Q08477 520 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 ABRAXAS2Q15018 415 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 NR6A1Q15406 480 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 FRG2Q64ET8 278 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 ADNP2Q6IQ32 1131 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 EPGNQ6UW88 154 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 FAM92BQ6ZTR7 304 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 ZNF438Q7Z4V0 828 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.58□□□□□ -0.24
CD4-208ENST00000538827 RNF175Q8N4F7 328 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 TBC1D19Q8N5T2 526 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 ANKS4BQ8N8V4 417 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 ZNF740Q8NDX6 193 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 FLVCR1-AS1Q8TAF5 88 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 NCSTNQ92542 709 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 UBE2E3Q969T4 207 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 TUBGCP3Q96CW5 907 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 PPM1MQ96MI6 270 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 TGM7Q96PF1 710 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 FRG2BQ96QU4 278 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 OR52B2Q96RD2 323 aa13.58□□□□□ -0.24
CD4-208ENST00000538827 TMEM121BQ9BXQ6 578 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms