RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 SCAMP2O15127 329 aaKnown RBP24.04■■□□□ 1.44
RAB40C-204ENST00000538492 KDELR2P33947 212 aa24.04■■□□□ 1.44
RAB40C-204ENST00000538492 IRS1P35568 1242 aa24.04■■□□□ 1.44
RAB40C-204ENST00000538492 EMP3P54852 163 aa24.04■■□□□ 1.44
RAB40C-204ENST00000538492 ISL1P61371 349 aa24.04■■□□□ 1.44
RAB40C-204ENST00000538492 PRSS36Q5K4E3 855 aa24.04■■□□□ 1.44
RAB40C-204ENST00000538492 BPIFB6Q8NFQ5 453 aa24.04■■□□□ 1.44
RAB40C-204ENST00000538492 VN1R2Q8NFZ6 395 aa24.04■■□□□ 1.44
RAB40C-204ENST00000538492 OR56A3Q8NH54 315 aa24.04■■□□□ 1.44
RAB40C-204ENST00000538492 TUBA1CQ9BQE3 449 aa24.04■■□□□ 1.44
RAB40C-204ENST00000538492 LHPPQ9H008 270 aa24.04■■□□□ 1.44
RAB40C-204ENST00000538492 TPT1P8Q9HAU6 139 aa24.04■■□□□ 1.44
RAB40C-204ENST00000538492 IL23AQ9NPF7 189 aa24.04■■□□□ 1.44
RAB40C-204ENST00000538492 DKK3Q9UBP4 350 aa24.04■■□□□ 1.44
RAB40C-204ENST00000538492 GNG14A0A1W2PPG7 69 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 HTR1AP08908 422 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 NUDT7P0C024 238 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 CYP4B1P13584 511 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 SHQ1Q6PI26 577 aaKnown RBP24.03■■□□□ 1.44
RAB40C-204ENST00000538492 CYP4Z1Q86W10 505 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 SYTL1Q8IYJ3 562 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 CFAP206Q8IYR0 622 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 SPARTQ8N0X7 666 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 PCM1Q15154 2024 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 PTGES3LE9PB15 166 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 FKBP9O95302 570 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 CYP17A1P05093 508 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 PCSK2P16519 638 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 CD247P20963 164 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 IGFBP5P24593 272 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 RAD23AP54725 363 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 RPS13P62277 151 aaKnown RBP24.03■■□□□ 1.44
RAB40C-204ENST00000538492 VLDLRP98155 873 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 ZNF33BQ06732 778 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 SKIV2LQ15477 1246 aaKnown RBP24.03■■□□□ 1.44
RAB40C-204ENST00000538492 CATSPEREQ5SY80 951 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 CPTPQ5TA50 214 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 OR2T5Q6IEZ7 315 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 OR2T29Q8NH02 315 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 ZNF480Q8WV37 535 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 SNX19Q92543 992 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 ERLEC1Q96DZ1 483 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 CDH7Q9ULB5 785 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 LRRK1Q38SD2 2015 aa24.03■■□□□ 1.44
RAB40C-204ENST00000538492 hCG_2014768A0A024R1R8 64 aa24.02■■□□□ 1.44
RAB40C-204ENST00000538492 PLK4O00444 970 aa24.02■■□□□ 1.44
RAB40C-204ENST00000538492 NTRK1P04629 796 aa24.02■■□□□ 1.44
RAB40C-204ENST00000538492 CISD3P0C7P0 127 aa24.02■■□□□ 1.44
RAB40C-204ENST00000538492 HLA-EP13747 358 aa24.02■■□□□ 1.44
RAB40C-204ENST00000538492 ENTPD1P49961 510 aa24.02■■□□□ 1.44
RAB40C-204ENST00000538492 RPS6KA3P51812 740 aa24.02■■□□□ 1.44
RAB40C-204ENST00000538492 ZNF691Q5VV52 312 aa24.02■■□□□ 1.44
RAB40C-204ENST00000538492 ST13P5Q8NFI4 369 aaPredicted RBP24.02■■□□□ 1.44
RAB40C-204ENST00000538492 CNIH3Q8TBE1 160 aa24.02■■□□□ 1.44
RAB40C-204ENST00000538492 OR2AG1Q9H205 316 aa24.02■■□□□ 1.44
RAB40C-204ENST00000538492 BRF2Q9HAW0 419 aa24.02■■□□□ 1.44
RAB40C-204ENST00000538492 VPS4AQ9UN37 437 aa24.02■■□□□ 1.44
RAB40C-204ENST00000538492 SH2B3Q9UQQ2 575 aa24.02■■□□□ 1.44
RAB40C-204ENST00000538492 KCNE2Q9Y6J6 123 aa24.02■■□□□ 1.44
RAB40C-204ENST00000538492 GBAP04062 536 aa24.02■■□□□ 1.44
RAB40C-204ENST00000538492 HNRNPFP52597 415 aaKnown RBP24.02■■□□□ 1.44
RAB40C-204ENST00000538492 ST8SIA6P61647 398 aa24.02■■□□□ 1.44
RAB40C-204ENST00000538492 SIM2Q14190 667 aaPredicted RBP24.02■■□□□ 1.44
RAB40C-204ENST00000538492 DHRS4L2Q6PKH6 230 aa24.02■■□□□ 1.44
RAB40C-204ENST00000538492 TRAPPC5Q8IUR0 188 aa24.02■■□□□ 1.44
RAB40C-204ENST00000538492 OTUB2Q96DC9 234 aa24.02■■□□□ 1.44
RAB40C-204ENST00000538492 LRIG1Q96JA1 1093 aa24.02■■□□□ 1.44
RAB40C-204ENST00000538492 HSH2DQ96JZ2 352 aa24.02■■□□□ 1.44
RAB40C-204ENST00000538492 PCDHB11Q9Y5F2 797 aa24.02■■□□□ 1.44
RAB40C-204ENST00000538492 MGAT4DA6NG13 374 aa24.01■■□□□ 1.43
RAB40C-204ENST00000538492 BCKDKO14874 412 aa24.01■■□□□ 1.43
RAB40C-204ENST00000538492 SEC14L2O76054 403 aa24.01■■□□□ 1.43
RAB40C-204ENST00000538492 FABP3P05413 133 aa24.01■■□□□ 1.43
RAB40C-204ENST00000538492 ABCB1P08183 1280 aaPredicted RBP24.01■■□□□ 1.43
RAB40C-204ENST00000538492 ADH5P11766 374 aa24.01■■□□□ 1.43
RAB40C-204ENST00000538492 TBPL1P62380 186 aa24.01■■□□□ 1.43
RAB40C-204ENST00000538492 RAPSNQ13702 412 aa24.01■■□□□ 1.43
RAB40C-204ENST00000538492 MAL2Q969L2 176 aa24.01■■□□□ 1.43
RAB40C-204ENST00000538492 NXPE3Q969Y0 559 aa24.01■■□□□ 1.43
RAB40C-204ENST00000538492 THAP11Q96EK4 314 aa24.01■■□□□ 1.43
RAB40C-204ENST00000538492 RIBC2Q9H4K1 309 aa24.01■■□□□ 1.43
RAB40C-204ENST00000538492 SH3BP4Q9P0V3 963 aa24.01■■□□□ 1.43
RAB40C-204ENST00000538492 FZD4Q9ULV1 537 aa24.01■■□□□ 1.43
RAB40C-204ENST00000538492 NOL3O60936 208 aaKnown RBP24.01■■□□□ 1.43
RAB40C-204ENST00000538492 C1orf105O95561 183 aa24.01■■□□□ 1.43
RAB40C-204ENST00000538492 JUNBP17275 347 aaPredicted RBP24.01■■□□□ 1.43
RAB40C-204ENST00000538492 BMPR1AP36894 532 aa24.01■■□□□ 1.43
RAB40C-204ENST00000538492 GALK1P51570 392 aa24.01■■□□□ 1.43
RAB40C-204ENST00000538492 IL5RAQ01344 420 aa24.01■■□□□ 1.43
RAB40C-204ENST00000538492 STARD3Q14849 445 aa24.01■■□□□ 1.43
RAB40C-204ENST00000538492 PDE12Q6L8Q7 609 aaKnown RBP24.01■■□□□ 1.43
RAB40C-204ENST00000538492 SLCO4C1Q6ZQN7 724 aa24.01■■□□□ 1.43
RAB40C-204ENST00000538492 GPR155Q7Z3F1 870 aa24.01■■□□□ 1.43
RAB40C-204ENST00000538492 SPPL3Q8TCT6 385 aa24.01■■□□□ 1.43
RAB40C-204ENST00000538492 POP5Q969H6 163 aaKnown RBP24.01■■□□□ 1.43
RAB40C-204ENST00000538492 DTD2Q96FN9 168 aa24.01■■□□□ 1.43
RAB40C-204ENST00000538492 TPD52L3Q96J77 140 aa24.01■■□□□ 1.43
RAB40C-204ENST00000538492 AASSQ9UDR5 926 aa24.01■■□□□ 1.43
RAB40C-204ENST00000538492 RPS6KA6Q9UK32 745 aa24.01■■□□□ 1.43
RAB40C-204ENST00000538492 SPINT1O43278 529 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms