RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 SRRM3A6NNA2 597 aaPredicted RBP12.5□□□□□ -0.41
CHFR-216ENST00000538235 ZNF839A8K0R7 811 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 AGPSO00116 658 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 E2F3O00716 465 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 OR7A17O14581 309 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 CCNT2O60583 730 aaKnown RBP12.5□□□□□ -0.41
CHFR-216ENST00000538235 PLIN3O60664 434 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 SPAG7O75391 227 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 STK16O75716 305 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 OR2B3O76000 313 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 B3GALT4O96024 378 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 RPS17P08708 135 aaKnown RBP12.5□□□□□ -0.41
CHFR-216ENST00000538235 LIPCP11150 499 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 KRT15P19012 456 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 KRT4P19013 534 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 TSPAN8P19075 237 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 CCR10P46092 362 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 HNMTP50135 292 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 EFNA3P52797 238 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 ITGA1P56199 1179 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 PCBP4P57723 403 aaKnown RBP12.5□□□□□ -0.41
CHFR-216ENST00000538235 HYAL2Q12891 473 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 CDC16Q13042 620 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 TSNAXIP1Q2TAA8 658 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 C1orf189Q5VU69 101 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 CES4AQ5XG92 561 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 NXPE4Q6UWF7 544 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 ZNF517Q6ZMY9 492 aaPredicted RBP12.5□□□□□ -0.41
CHFR-216ENST00000538235 COX15Q7KZN9 410 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 GOLGA7Q7Z5G4 137 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 ADCK2Q7Z695 626 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 SPACA3Q8IXA5 215 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 LSMEM2Q8N112 164 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 RNF175Q8N4F7 328 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 METTL27Q8N6F8 245 aaPredicted RBP12.5□□□□□ -0.41
CHFR-216ENST00000538235 BANPQ8N9N5 519 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 ACMSDQ8TDX5 336 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 ATL1Q8WXF7 558 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 ZUFSPQ96AP4 578 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 PHF21BQ96EK2 531 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 SCYL1Q96KG9 808 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 DCBLD2Q96PD2 775 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 GBP5Q96PP8 586 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 TMEM237Q96Q45 408 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 B3GNT4Q9C0J1 378 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 MRPL46Q9H2W6 279 aaKnown RBP12.5□□□□□ -0.41
CHFR-216ENST00000538235 TMEM184CQ9NVA4 438 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 DNAJC11Q9NVH1 559 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 GEMIN8Q9NWZ8 242 aaKnown RBP12.5□□□□□ -0.41
CHFR-216ENST00000538235 AKAP7Q9P0M2 348 aaPredicted RBP12.5□□□□□ -0.41
CHFR-216ENST00000538235 IL17BQ9UHF5 180 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 ZNF225Q9UK10 706 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 PCTPQ9UKL6 214 aa12.5□□□□□ -0.41
CHFR-216ENST00000538235 RUVBL1Q9Y265 456 aaKnown RBP12.5□□□□□ -0.41
CHFR-216ENST00000538235 MRPS18BQ9Y676 258 aaKnown RBP12.5□□□□□ -0.41
CHFR-216ENST00000538235 KCNE1BA0A087WTH5 132 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 FFAR3O14843 346 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 GPR42O15529 346 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 ZSCAN9O15535 394 aaPredicted RBP12.49□□□□□ -0.41
CHFR-216ENST00000538235 FOXS1O43638 330 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 DNAJB6O75190 326 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 CCNDBP1O95273 360 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 MT-ND3P03897 115 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 ATXN8OSP0DMR3 200 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 GFAPP14136 432 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 LIFP15018 202 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 EZRP15311 586 aaKnown RBP12.49□□□□□ -0.41
CHFR-216ENST00000538235 CCND1P24385 295 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 EEF1DP29692 281 aaKnown RBP12.49□□□□□ -0.41
CHFR-216ENST00000538235 STAT5AP42229 794 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 SCTRP47872 440 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 ALDH18A1P54886 795 aaKnown RBP12.49□□□□□ -0.41
CHFR-216ENST00000538235 CYP4F2P78329 520 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 TRAF3Q13114 568 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 MPP2Q14168 576 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 DOC2AQ14183 400 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 SLBPQ14493 270 aaKnown RBP eCLIP12.49□□□□□ -0.41
CHFR-216ENST00000538235 SLC9A5Q14940 896 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 PCBP2Q15366 365 aaKnown RBP eCLIP12.49□□□□□ -0.41
CHFR-216ENST00000538235 PDK4Q16654 411 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 KRT71Q3SY84 523 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 WASHC2DQ5SRD0 308 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 TMTC4Q5T4D3 741 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 LRRC70Q7Z2Q7 622 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 TMEM126BQ8IUX1 230 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 SRRM1Q8IYB3 904 aaKnown RBP12.49□□□□□ -0.41
CHFR-216ENST00000538235 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.49□□□□□ -0.41
CHFR-216ENST00000538235 RIBC1Q8N443 379 aaPredicted RBP12.49□□□□□ -0.41
CHFR-216ENST00000538235 SNX31Q8N9S9 440 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 KCT2Q8NC54 265 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 OR52B6Q8NGF0 335 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 CT55Q8WUE5 264 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 HNRNPLLQ8WVV9 542 aaKnown RBP12.49□□□□□ -0.41
CHFR-216ENST00000538235 TM4SF19Q96DZ7 209 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 WDR34Q96EX3 536 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 APOPT1Q96IL0 206 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 CABS1Q96KC9 395 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 TEFMQ96QE5 360 aaKnown RBP12.49□□□□□ -0.41
CHFR-216ENST00000538235 MRPL57Q9BQC6 102 aaKnown RBP12.49□□□□□ -0.41
CHFR-216ENST00000538235 SELENOSQ9BQE4 189 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms