RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 Q6ZS92 163 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 OVCH1Q7RTY7 1134 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 TAX1BP1Q86VP1 789 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 ZC3HC1Q86WB0 502 aaKnown RBP11.87□□□□□ -0.51
PRKDC-207ENST00000536483 ZADH2Q8N4Q0 377 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 ARHGEF39Q8N4T4 335 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 TM9SF4Q92544 642 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 OR2A5Q96R48 311 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 NDNQ99608 321 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 SGPP1Q9BX95 441 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 TRIM31Q9BZY9 425 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 PCBD2Q9H0N5 130 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 WDR54Q9H977 334 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 SLC6A20Q9NP91 592 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 MRPS30Q9NP92 439 aaKnown RBP11.87□□□□□ -0.51
PRKDC-207ENST00000536483 ATP13A2Q9NQ11 1180 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 CUTCQ9NTM9 273 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 TXLNGQ9NUQ3 528 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 CDC23Q9UJX2 597 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 NOVA2Q9UNW9 492 aaKnown RBP11.87□□□□□ -0.51
PRKDC-207ENST00000536483 NTNG1Q9Y2I2 539 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 CSMD1Q96PZ7 3565 aa11.87□□□□□ -0.51
PRKDC-207ENST00000536483 MDC1Q14676 2089 aaKnown RBP11.87□□□□□ -0.51
PRKDC-207ENST00000536483 POLEQ07864 2286 aa11.86□□□□□ -0.51
PRKDC-207ENST00000536483 SNRNP200O75643 2136 aaKnown RBP11.86□□□□□ -0.51
PRKDC-207ENST00000536483 VSTM2BA6NLU5 285 aa11.86□□□□□ -0.51
PRKDC-207ENST00000536483 ENO4A6NNW6 628 aa11.86□□□□□ -0.51
PRKDC-207ENST00000536483 KLHL41O60662 606 aa11.86□□□□□ -0.51
PRKDC-207ENST00000536483 IPO13O94829 963 aaKnown RBP11.86□□□□□ -0.51
PRKDC-207ENST00000536483 WISP3O95389 354 aaPredicted RBP11.86□□□□□ -0.51
PRKDC-207ENST00000536483 ENO2P09104 434 aaPredicted RBP11.86□□□□□ -0.51
PRKDC-207ENST00000536483 EZRP15311 586 aaKnown RBP11.86□□□□□ -0.51
PRKDC-207ENST00000536483 CCND1P24385 295 aa11.86□□□□□ -0.51
PRKDC-207ENST00000536483 SOX8P57073 446 aa11.86□□□□□ -0.51
PRKDC-207ENST00000536483 HP1BP3Q5SSJ5 553 aaPredicted RBP11.86□□□□□ -0.51
PRKDC-207ENST00000536483 GARNL3Q5VVW2 1013 aa11.86□□□□□ -0.51
PRKDC-207ENST00000536483 FRMPD2BQ6IN97 320 aa11.86□□□□□ -0.51
PRKDC-207ENST00000536483 PRMT9Q6P2P2 845 aa11.86□□□□□ -0.51
PRKDC-207ENST00000536483 SUSD1Q6UWL2 747 aa11.86□□□□□ -0.51
PRKDC-207ENST00000536483 CUZD1Q86UP6 607 aa11.86□□□□□ -0.51
PRKDC-207ENST00000536483 SPNS2Q8IVW8 549 aa11.86□□□□□ -0.51
PRKDC-207ENST00000536483 MYO1HQ8N1T3 1032 aa11.86□□□□□ -0.51
PRKDC-207ENST00000536483 TTC29Q8NA56 475 aaPredicted RBP11.86□□□□□ -0.51
PRKDC-207ENST00000536483 MVB12AQ96EY5 273 aa11.86□□□□□ -0.51
PRKDC-207ENST00000536483 CFAP36Q96G28 342 aa11.86□□□□□ -0.51
PRKDC-207ENST00000536483 BARD1Q99728 777 aaKnown RBP11.86□□□□□ -0.51
PRKDC-207ENST00000536483 OLFM1Q99784 485 aa11.86□□□□□ -0.51
PRKDC-207ENST00000536483 SARGQ9BW04 601 aa11.86□□□□□ -0.51
PRKDC-207ENST00000536483 L2HGDHQ9H9P8 463 aa11.86□□□□□ -0.51
PRKDC-207ENST00000536483 POPDC3Q9HBV1 291 aa11.86□□□□□ -0.51
PRKDC-207ENST00000536483 PPANQ9NQ55 473 aaKnown RBP11.86□□□□□ -0.51
PRKDC-207ENST00000536483 TMEM184CQ9NVA4 438 aa11.86□□□□□ -0.51
PRKDC-207ENST00000536483 ZFATQ9P243 1243 aa11.86□□□□□ -0.51
PRKDC-207ENST00000536483 STOX2Q9P2F5 926 aaPredicted RBP11.86□□□□□ -0.51
PRKDC-207ENST00000536483 TAC3Q9UHF0 121 aa11.86□□□□□ -0.51
PRKDC-207ENST00000536483 ADAMTS6Q9UKP5 1117 aa11.86□□□□□ -0.51
PRKDC-207ENST00000536483 UTP11Q9Y3A2 253 aaKnown RBP11.86□□□□□ -0.51
PRKDC-207ENST00000536483 PCDHGA10Q9Y5H3 936 aa11.86□□□□□ -0.51
PRKDC-207ENST00000536483 CSAG2Q9Y5P2 127 aa11.86□□□□□ -0.51
PRKDC-207ENST00000536483 PSAT1Q9Y617 370 aa11.86□□□□□ -0.51
PRKDC-207ENST00000536483 IGLV3-12A0A075B6K2 115 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 LOC105369274A0A096LPK9 316 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 LOC102723532A0A0G2JNH3 316 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 HYKKA2RU49 373 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 AGPSO00116 658 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 TXNDC9O14530 226 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 NRP2O60462 931 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 ALAS2P22557 587 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 ITGA3P26006 1051 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 GUCY2DQ02846 1103 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 PDAP1Q13442 181 aaKnown RBP11.85□□□□□ -0.51
PRKDC-207ENST00000536483 ZXDCQ2QGD7 858 aaPredicted RBP11.85□□□□□ -0.51
PRKDC-207ENST00000536483 AGTRAPQ6RW13 159 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 LCTLQ6UWM7 567 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 TMEM207Q6UWW9 146 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 TTLL10Q6ZVT0 673 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 COX15Q7KZN9 410 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 STRA8Q7Z7C7 330 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 ANKMY2Q8IV38 441 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 PALM2Q8IXS6 379 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 ZBED8Q8IZ13 594 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 OR4N4Q8N0Y3 316 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 ABHD11Q8NFV4 315 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 PYROXD1Q8WU10 500 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 THAP11Q96EK4 314 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 ACAT2Q9BWD1 397 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 FAM129AQ9BZQ8 928 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 RAB17Q9H0T7 212 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 RHOJQ9H4E5 214 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 SYNPO2LQ9H987 977 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 SLC17A6Q9P2U8 582 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 NXT1Q9UKK6 140 aaKnown RBP11.85□□□□□ -0.51
PRKDC-207ENST00000536483 ANKRD12Q6UB98 2062 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 CNTRLQ7Z7A1 2325 aa11.85□□□□□ -0.51
PRKDC-207ENST00000536483 A0A0J9YVX5 310 aa11.84□□□□□ -0.51
PRKDC-207ENST00000536483 FAM159BA6NKW6 160 aa11.84□□□□□ -0.51
PRKDC-207ENST00000536483 H0YGG7 62 aa11.84□□□□□ -0.51
PRKDC-207ENST00000536483 ALOX12BO75342 701 aa11.84□□□□□ -0.51
PRKDC-207ENST00000536483 NPPBP16860 134 aa11.84□□□□□ -0.51
PRKDC-207ENST00000536483 ZNF37AP17032 561 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms