RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 AMBRA1Q9C0C7 1298 aa17.4■□□□□ 0.38
RAB40C-203ENST00000535977 NPAP1Q9NZP6 1156 aa17.4■□□□□ 0.38
RAB40C-203ENST00000535977 USP22Q9UPT9 525 aa17.4■□□□□ 0.38
RAB40C-203ENST00000535977 MICAL3Q7RTP6 2002 aa17.4■□□□□ 0.38
RAB40C-203ENST00000535977 A0A0G2JMP0 313 aa17.4■□□□□ 0.38
RAB40C-203ENST00000535977 AGAP5A6NIR3 686 aa17.4■□□□□ 0.38
RAB40C-203ENST00000535977 LOC730098B7Z3J9 87 aa17.4■□□□□ 0.38
RAB40C-203ENST00000535977 LAG3P18627 525 aa17.4■□□□□ 0.38
RAB40C-203ENST00000535977 CYP4F3Q08477 520 aa17.4■□□□□ 0.38
RAB40C-203ENST00000535977 ATG9BQ674R7 924 aa17.4■□□□□ 0.38
RAB40C-203ENST00000535977 LRRC70Q7Z2Q7 622 aa17.4■□□□□ 0.38
RAB40C-203ENST00000535977 ANKRD33Q7Z3H0 272 aa17.4■□□□□ 0.38
RAB40C-203ENST00000535977 SLC51BQ86UW2 128 aa17.4■□□□□ 0.38
RAB40C-203ENST00000535977 SYTL1Q8IYJ3 562 aa17.4■□□□□ 0.38
RAB40C-203ENST00000535977 PSD4Q8NDX1 1056 aa17.4■□□□□ 0.38
RAB40C-203ENST00000535977 GRPEL2Q8TAA5 225 aa17.4■□□□□ 0.38
RAB40C-203ENST00000535977 AURKBQ96GD4 344 aaPredicted RBP17.4■□□□□ 0.38
RAB40C-203ENST00000535977 THUMPD3Q9BV44 507 aaKnown RBP17.4■□□□□ 0.38
RAB40C-203ENST00000535977 PIF1Q9H611 641 aa17.4■□□□□ 0.38
RAB40C-203ENST00000535977 SMURF2Q9HAU4 748 aa17.4■□□□□ 0.38
RAB40C-203ENST00000535977 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.4■□□□□ 0.38
RAB40C-203ENST00000535977 SCN5AQ14524 2016 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 AP3D1O14617 1153 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 XPNPEP2O43895 674 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 ERN1O75460 977 aaKnown RBP17.39■□□□□ 0.37
RAB40C-203ENST00000535977 PGRP06401 933 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 C8GP07360 202 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 OR56A5P0C7T3 313 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 PRPS2P11908 318 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 ALOX12P18054 663 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 ACVR2AP27037 513 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 ZXDBP98169 803 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 FAM174BQ3ZCQ3 159 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 GGTA1PQ4G0N0 100 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 CRTC1Q6UUV9 634 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 RGL4Q8IZJ4 473 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 LIX1Q8N485 282 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 LGALS12Q96DT0 336 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 HBEGFQ99075 208 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 CPEB1Q9BZB8 566 aaKnown RBP17.39■□□□□ 0.37
RAB40C-203ENST00000535977 RPRD1BQ9NQG5 326 aaKnown RBP17.39■□□□□ 0.37
RAB40C-203ENST00000535977 AASDHPPTQ9NRN7 309 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 FBXL12Q9NXK8 326 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 VAPAQ9P0L0 249 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 INTS6Q9UL03 887 aaKnown RBP17.39■□□□□ 0.37
RAB40C-203ENST00000535977 A0A0X1KG70 313 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 B8ZZF3 427 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 hCG_2039718K7EN88 272 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 POLR1CO15160 346 aaPredicted RBP17.39■□□□□ 0.37
RAB40C-203ENST00000535977 PKLRP30613 574 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 GDF5P43026 501 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 RPIAP49247 311 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 HNMTP50135 292 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 TOP3AQ13472 1001 aaPredicted RBP17.39■□□□□ 0.37
RAB40C-203ENST00000535977 ARHGEF7Q14155 803 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 ACOX1Q15067 660 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 RUNDC3AQ59EK9 446 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 NXNL2Q5VZ03 156 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 SVOPLQ8N434 492 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 OR5H6Q8NGV6 325 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 ECHDC3Q96DC8 303 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 C12orf10Q9HB07 376 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 DNAJB9Q9UBS3 223 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 SNX6Q9UNH7 406 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 SCN8AQ9UQD0 1980 aa17.39■□□□□ 0.37
RAB40C-203ENST00000535977 KIAA1671Q9BY89 1806 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 ELOVL7A1L3X0 281 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 FFAR3O14843 346 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 GPR42O15529 346 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 ZNF821O75541 412 aaPredicted RBP17.38■□□□□ 0.37
RAB40C-203ENST00000535977 IL1RNP18510 177 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 MAPK1P28482 360 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 CA5AP35218 305 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 OR3A3P47888 321 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 FCHO2Q0JRZ9 810 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 FAM214AQ32MH5 1076 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 DGKKQ5KSL6 1271 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 TUBA3EQ6PEY2 450 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 NECAB2Q7Z6G3 386 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 ZDHHC13Q8IUH4 622 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 UBQLNLQ8IYU4 475 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 TP53I13Q8NBR0 393 aaPredicted RBP17.38■□□□□ 0.37
RAB40C-203ENST00000535977 LSM14AQ8ND56 463 aaKnown RBP17.38■□□□□ 0.37
RAB40C-203ENST00000535977 ZNF548Q8NEK5 533 aaPredicted RBP17.38■□□□□ 0.37
RAB40C-203ENST00000535977 ZNF555Q8NEP9 628 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 ZNF296Q8WUU4 475 aaPredicted RBP17.38■□□□□ 0.37
RAB40C-203ENST00000535977 ZNF689Q96CS4 500 aaPredicted RBP17.38■□□□□ 0.37
RAB40C-203ENST00000535977 REXO4Q9GZR2 422 aaKnown RBP17.38■□□□□ 0.37
RAB40C-203ENST00000535977 MKRN2Q9H000 416 aaKnown RBP17.38■□□□□ 0.37
RAB40C-203ENST00000535977 SUV39H2Q9H5I1 410 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 CFAP97Q9P2B7 532 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 ERVK-18Q9QC07 812 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 IGLV3-16A0A075B6K0 115 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 SCAMP3O14828 347 aaKnown RBP17.38■□□□□ 0.37
RAB40C-203ENST00000535977 KPNA5O15131 536 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 SLC16A5O15375 505 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 NOBOXO60393 691 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 DFNA5O60443 496 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 CKMP06732 381 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 MPC1LP0DKB6 136 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms