RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 STARD8Q92502 1023 aa21.7■■□□□ 1.06
SFSWAP-204ENST00000535399 TSNARE1Q96NA8 513 aa21.7■■□□□ 1.06
SFSWAP-204ENST00000535399 GPR87Q9BY21 358 aa21.7■■□□□ 1.06
SFSWAP-204ENST00000535399 DYRK1BQ9Y463 629 aa21.7■■□□□ 1.06
SFSWAP-204ENST00000535399 MGAQ8IWI9 3026 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 KCNE1BA0A087WTH5 132 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 A0A1B0GX78 115 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 FEZF1A0PJY2 475 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 HYKKA2RU49 373 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 UBXN8O00124 270 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 DSCR3O14972 297 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 NKX2-8O15522 239 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 IPO13O94829 963 aaKnown RBP21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 RAB40ALP0C0E4 278 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 MTHFD2P13995 350 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 AGXTP21549 392 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 PTPN4P29074 926 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 BCL6P41182 706 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 HSPA7P48741 367 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 FAM214AQ32MH5 1076 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 FBXO48Q5FWF7 155 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 TTLL10Q6ZVT0 673 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 VN1R4Q7Z5H5 301 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 ARHGEF39Q8N4T4 335 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 AENQ8WTP8 325 aaKnown RBP21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 RERGQ96A58 199 aaPredicted RBP21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 ESAMQ96AP7 390 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 MTBPQ96DY7 904 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 THAP11Q96EK4 314 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 C10orf90Q96M02 699 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 CCDC77Q9BR77 488 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 SARGQ9BW04 601 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 CNOT10Q9H9A5 744 aaKnown RBP21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 SLC22A11Q9NSA0 550 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 ZNF358Q9NW07 568 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 PSMC3IPQ9P2W1 217 aaPredicted RBP21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 RUVBL1Q9Y265 456 aaKnown RBP21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 FARSAQ9Y285 508 aaKnown RBP21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 KCNE2Q9Y6J6 123 aa21.69■■□□□ 1.06
SFSWAP-204ENST00000535399 HEATR5BQ9P2D3 2071 aa21.68■■□□□ 1.06
SFSWAP-204ENST00000535399 LOC400499M0QZD8 3231 aa21.68■■□□□ 1.06
SFSWAP-204ENST00000535399 SUPT3HB4E1H0 165 aa21.68■■□□□ 1.06
SFSWAP-204ENST00000535399 P2RX6O15547 441 aa21.68■■□□□ 1.06
SFSWAP-204ENST00000535399 LCMT2O60294 686 aaKnown RBP21.68■■□□□ 1.06
SFSWAP-204ENST00000535399 SUPT3HO75486 399 aa21.68■■□□□ 1.06
SFSWAP-204ENST00000535399 RFPL1O75677 317 aa21.68■■□□□ 1.06
SFSWAP-204ENST00000535399 ONECUT2O95948 504 aa21.68■■□□□ 1.06
SFSWAP-204ENST00000535399 S100BP04271 92 aaPredicted RBP21.68■■□□□ 1.06
SFSWAP-204ENST00000535399 ALAS2P22557 587 aa21.68■■□□□ 1.06
SFSWAP-204ENST00000535399 EMP3P54852 163 aa21.68■■□□□ 1.06
SFSWAP-204ENST00000535399 CYP4F2P78329 520 aa21.68■■□□□ 1.06
SFSWAP-204ENST00000535399 DCDP81605 110 aaKnown RBP21.68■■□□□ 1.06
SFSWAP-204ENST00000535399 NFKB2Q00653 900 aa21.68■■□□□ 1.06
SFSWAP-204ENST00000535399 HKDC1Q2TB90 917 aa21.68■■□□□ 1.06
SFSWAP-204ENST00000535399 NKAIN1Q4KMZ8 207 aa21.68■■□□□ 1.06
SFSWAP-204ENST00000535399 TECRLQ5HYJ1 363 aa21.68■■□□□ 1.06
SFSWAP-204ENST00000535399 KLC3Q6P597 504 aa21.68■■□□□ 1.06
SFSWAP-204ENST00000535399 NXPE4Q6UWF7 544 aa21.68■■□□□ 1.06
SFSWAP-204ENST00000535399 DTWD1Q8N5C7 304 aa21.68■■□□□ 1.06
SFSWAP-204ENST00000535399 NLNQ9BYT8 704 aa21.68■■□□□ 1.06
SFSWAP-204ENST00000535399 FAM117AQ9C073 453 aa21.68■■□□□ 1.06
SFSWAP-204ENST00000535399 SPNS1Q9H2V7 528 aa21.68■■□□□ 1.06
SFSWAP-204ENST00000535399 ACTL8Q9H568 366 aa21.68■■□□□ 1.06
SFSWAP-204ENST00000535399 PELI2Q9HAT8 420 aa21.68■■□□□ 1.06
SFSWAP-204ENST00000535399 ASB1Q9Y576 335 aa21.68■■□□□ 1.06
SFSWAP-204ENST00000535399 SYCE1LA8MT33 242 aa21.67■■□□□ 1.06
SFSWAP-204ENST00000535399 STK16O75716 305 aa21.67■■□□□ 1.06
SFSWAP-204ENST00000535399 COL6A2P12110 1019 aa21.67■■□□□ 1.06
SFSWAP-204ENST00000535399 GRK3P35626 688 aa21.67■■□□□ 1.06
SFSWAP-204ENST00000535399 HSD17B3P37058 310 aa21.67■■□□□ 1.06
SFSWAP-204ENST00000535399 RPS18P62269 152 aaKnown RBP21.67■■□□□ 1.06
SFSWAP-204ENST00000535399 RPS15P62841 145 aaKnown RBP21.67■■□□□ 1.06
SFSWAP-204ENST00000535399 REEP5Q00765 189 aa21.67■■□□□ 1.06
SFSWAP-204ENST00000535399 MEF2AQ02078 507 aaPredicted RBP21.67■■□□□ 1.06
SFSWAP-204ENST00000535399 NCF4Q15080 339 aa21.67■■□□□ 1.06
SFSWAP-204ENST00000535399 CRTC2Q53ET0 693 aaPredicted RBP21.67■■□□□ 1.06
SFSWAP-204ENST00000535399 TMPRSS11BQ86T26 416 aa21.67■■□□□ 1.06
SFSWAP-204ENST00000535399 ENDOVQ8N8Q3 282 aaKnown RBP21.67■■□□□ 1.06
SFSWAP-204ENST00000535399 MFSD9Q8NBP5 474 aa21.67■■□□□ 1.06
SFSWAP-204ENST00000535399 ZNF740Q8NDX6 193 aa21.67■■□□□ 1.06
SFSWAP-204ENST00000535399 MZB1Q8WU39 189 aa21.67■■□□□ 1.06
SFSWAP-204ENST00000535399 UBTD2Q8WUN7 234 aa21.67■■□□□ 1.06
SFSWAP-204ENST00000535399 DNAJC11Q9NVH1 559 aa21.67■■□□□ 1.06
SFSWAP-204ENST00000535399 NDOR1Q9UHB4 597 aa21.67■■□□□ 1.06
SFSWAP-204ENST00000535399 IQANK1A0A1B0GTG1 560 aa21.66■■□□□ 1.06
SFSWAP-204ENST00000535399 TRBC2A0A5B9 178 aa21.66■■□□□ 1.06
SFSWAP-204ENST00000535399 C9J4A7 227 aa21.66■■□□□ 1.06
SFSWAP-204ENST00000535399 MAP2K7O14733 419 aa21.66■■□□□ 1.06
SFSWAP-204ENST00000535399 CREG1O75629 220 aa21.66■■□□□ 1.06
SFSWAP-204ENST00000535399 STATHP02808 62 aa21.66■■□□□ 1.06
SFSWAP-204ENST00000535399 AGTR2P50052 363 aa21.66■■□□□ 1.06
SFSWAP-204ENST00000535399 MC1RQ01726 317 aa21.66■■□□□ 1.06
SFSWAP-204ENST00000535399 CDC16Q13042 620 aa21.66■■□□□ 1.06
SFSWAP-204ENST00000535399 MUM1Q2TAK8 710 aa21.66■■□□□ 1.06
SFSWAP-204ENST00000535399 GARNL3Q5VVW2 1013 aa21.66■■□□□ 1.06
SFSWAP-204ENST00000535399 SLCO4C1Q6ZQN7 724 aa21.66■■□□□ 1.06
SFSWAP-204ENST00000535399 COX15Q7KZN9 410 aa21.66■■□□□ 1.06
SFSWAP-204ENST00000535399 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.66■■□□□ 1.06
SFSWAP-204ENST00000535399 TM4SF19Q96DZ7 209 aa21.66■■□□□ 1.06
SFSWAP-204ENST00000535399 CABS1Q96KC9 395 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms