RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 TNPO3Q9Y5L0 923 aaKnown RBP11.88□□□□□ -0.51
SCARB1-204ENST00000535005 AK5Q9Y6K8 562 aa11.88□□□□□ -0.51
SCARB1-204ENST00000535005 USP34Q70CQ2 3546 aa11.87□□□□□ -0.51
SCARB1-204ENST00000535005 LILRA5A6NI73 299 aa11.87□□□□□ -0.51
SCARB1-204ENST00000535005 ZNF701M0R085 212 aaPredicted RBP11.87□□□□□ -0.51
SCARB1-204ENST00000535005 FLRT2O43155 660 aa11.87□□□□□ -0.51
SCARB1-204ENST00000535005 TRMUO75648 421 aaKnown RBP11.87□□□□□ -0.51
SCARB1-204ENST00000535005 GLB1P16278 677 aa11.87□□□□□ -0.51
SCARB1-204ENST00000535005 IMPDH1P20839 514 aa11.87□□□□□ -0.51
SCARB1-204ENST00000535005 PKLRP30613 574 aa11.87□□□□□ -0.51
SCARB1-204ENST00000535005 SHMT2P34897 504 aa11.87□□□□□ -0.51
SCARB1-204ENST00000535005 SLC6A12P48065 614 aa11.87□□□□□ -0.51
SCARB1-204ENST00000535005 PNLIPRP1P54315 467 aa11.87□□□□□ -0.51
SCARB1-204ENST00000535005 TUBA4AP68366 448 aa11.87□□□□□ -0.51
SCARB1-204ENST00000535005 NHLH1Q02575 133 aa11.87□□□□□ -0.51
SCARB1-204ENST00000535005 NR1D2Q14995 579 aa11.87□□□□□ -0.51
SCARB1-204ENST00000535005 PCBP2Q15366 365 aaKnown RBP eCLIP11.87□□□□□ -0.518e-9■□□□□ 9.7
SCARB1-204ENST00000535005 PFKFB4Q16877 469 aa11.87□□□□□ -0.51
SCARB1-204ENST00000535005 PROX2Q3B8N5 592 aa11.87□□□□□ -0.51
SCARB1-204ENST00000535005 MBOAT1Q6ZNC8 495 aa11.87□□□□□ -0.51
SCARB1-204ENST00000535005 C10orf107Q8IVU9 208 aa11.87□□□□□ -0.51
SCARB1-204ENST00000535005 EID2Q8N6I1 236 aa11.87□□□□□ -0.51
SCARB1-204ENST00000535005 PTGR2Q8N8N7 351 aaPredicted RBP11.87□□□□□ -0.51
SCARB1-204ENST00000535005 OR2L8Q8NGY9 312 aa11.87□□□□□ -0.51
SCARB1-204ENST00000535005 L3HYPDHQ96EM0 354 aa11.87□□□□□ -0.51
SCARB1-204ENST00000535005 APOLD1Q96LR9 279 aa11.87□□□□□ -0.51
SCARB1-204ENST00000535005 RXFP3Q9NSD7 469 aa11.87□□□□□ -0.51
SCARB1-204ENST00000535005 OR6C2Q9NZP2 312 aa11.87□□□□□ -0.51
SCARB1-204ENST00000535005 ICKQ9UPZ9 632 aa11.87□□□□□ -0.51
SCARB1-204ENST00000535005 AP4B1Q9Y6B7 739 aa11.87□□□□□ -0.51
SCARB1-204ENST00000535005 ZNF292O60281 2723 aa11.87□□□□□ -0.51
SCARB1-204ENST00000535005 MYO15AQ9UKN7 3530 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 LY6G6EA0A0G2JKS1 128 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 KRT87PA6NCN2 255 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 NCF1BA6NI72 391 aaPredicted RBP11.86□□□□□ -0.51
SCARB1-204ENST00000535005 NCF1CA8MVU1 366 aaPredicted RBP11.86□□□□□ -0.51
SCARB1-204ENST00000535005 E7ENX8 843 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 TRIM13O60858 407 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 OR6B1O95007 311 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 PGM3O95394 542 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 CD59P13987 128 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 NCF1P14598 390 aaPredicted RBP11.86□□□□□ -0.51
SCARB1-204ENST00000535005 PNLIPP16233 465 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 ZNF23P17027 643 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 KCNA4P22459 653 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 TPP2P29144 1249 aaPredicted RBP11.86□□□□□ -0.51
SCARB1-204ENST00000535005 GPR3P46089 330 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 CDK9P50750 372 aaKnown RBP11.86□□□□□ -0.51
SCARB1-204ENST00000535005 ABCE1P61221 599 aaKnown RBP11.86□□□□□ -0.51
SCARB1-204ENST00000535005 NAA20P61599 178 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 TAP2Q03519 686 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 NR0B2Q15466 257 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 LIPMQ5VYY2 423 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 RAB44Q7Z6P3 723 aaPredicted RBP11.86□□□□□ -0.51
SCARB1-204ENST00000535005 AMIGO1Q86WK6 493 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 LCN9Q8WX39 176 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 TMEM79Q9BSE2 394 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 CD244Q9BZW8 370 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 C20orf27Q9GZN8 174 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 RIMS3Q9UJD0 308 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 PLAGL1Q9UM63 463 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 RNF215Q9Y6U7 377 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 U3KQA8 63 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 RIF1Q5UIP0 2472 aaKnown RBP11.86□□□□□ -0.51
SCARB1-204ENST00000535005 GOLGA8QA0A0J9YX86 632 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 GOLGA8OA6NCC3 632 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 GOLGA8NF8WBI6 632 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 ZNF195O14628 629 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 STK16O75716 305 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 PDE5AO76074 875 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 EPHA4P54764 986 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 NUP107P57740 925 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 HERVK_113P63132 956 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 KLF10Q13118 480 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 LRRC36Q1X8D7 754 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 AASDHQ4L235 1098 aaPredicted RBP11.86□□□□□ -0.51
SCARB1-204ENST00000535005 IRAK1BP1Q5VVH5 260 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 LINC01555Q8NAE3 123 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 ZFP28Q8NHY6 868 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 FNDC8Q8TC99 324 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 SMPDL3AQ92484 453 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 PHF21BQ96EK2 531 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 IL17FQ96PD4 163 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 SGPP1Q9BX95 441 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 ERVK-6Q9BXR3 956 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 WWOXQ9NZC7 414 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 LRIT1Q9P2V4 623 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 BTBD3Q9Y2F9 522 aa11.86□□□□□ -0.51
SCARB1-204ENST00000535005 GOLGA4Q13439 2230 aaKnown RBP11.85□□□□□ -0.51
SCARB1-204ENST00000535005 CCDC160A6NGH7 325 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 RHPN2P1A8MT19 583 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 E9PBE3 544 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 PRICKLE3O43900 615 aaPredicted RBP11.85□□□□□ -0.51
SCARB1-204ENST00000535005 RPS17P08708 135 aaKnown RBP11.85□□□□□ -0.51
SCARB1-204ENST00000535005 CKMT1AP12532 417 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 CDH2P19022 906 aaPredicted RBP11.85□□□□□ -0.51
SCARB1-204ENST00000535005 AGTR2P50052 363 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 DUSP3P51452 185 aaPredicted RBP11.85□□□□□ -0.51
SCARB1-204ENST00000535005 EMP3P54852 163 aa11.85□□□□□ -0.51
SCARB1-204ENST00000535005 MYBPC1Q00872 1141 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms