RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 PIH1D2Q8WWB5 315 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 RXFP2Q8WXD0 754 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 CASKIN2Q8WXE0 1202 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 CPT1BQ92523 772 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 TM9SF4Q92544 642 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 NR4A3Q92570 626 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 TFAP2CQ92754 450 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 SDCCAG3Q96C92 435 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 PGAP3Q96FM1 320 aaPredicted RBP2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 THOC3Q96J01 351 aaKnown RBP2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 C18orf12Q96KH6 178 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 FER1L6-AS2Q96M78 137 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 AGAP4Q96P64 663 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 FCRL4Q96PJ5 515 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 ZNF559Q9BR84 538 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 HERPUD2Q9BSE4 406 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 STN1Q9H668 368 aaKnown RBP2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 ATP13A3Q9H7F0 1226 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 ACTR5Q9H9F9 607 aaPredicted RBP2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 UCK1Q9HA47 277 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 EMC7Q9NPA0 242 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 RRAGDQ9NQL2 400 aaPredicted RBP2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 FAM207AQ9NSI2 230 aaPredicted RBP2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 SPTLC3Q9NUV7 552 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 GPATCH2LQ9NWQ4 482 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 HRASLS2Q9NWW9 162 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 CHMP5Q9NZZ3 219 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 LRFN1Q9P244 771 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 SEMA5BQ9P283 1151 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 EPHA6Q9UF33 1036 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 ARMCX3Q9UH62 379 aaPredicted RBP2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 STAP1Q9ULZ2 295 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 PSMD13Q9UNM6 376 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 CHST2Q9Y4C5 530 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 PIKFYVEQ9Y2I7 2098 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 SONP18583 2426 aaKnown RBP2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 NOTCH1P46531 2555 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 CXorf51AA0A1B0GTR3 108 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 OR6C74A6NCV1 312 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 TLCD2A6NGC4 264 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 B5MCH6 92 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 NPIPA5E9PKD4 350 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 DFFAO00273 331 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 SOCS6O14544 535 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 HTRA2O43464 458 aaPredicted RBP2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 CTAG2O75638 210 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 TOXO94900 526 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 PGLSO95336 258 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 WDPCPO95876 746 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 PTMAP06454 111 aaKnown RBP2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 EGR2P11161 476 aaPredicted RBP2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 CYP2A6P11509 494 aaPredicted RBP2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 PFKFB1P16118 471 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 ZNF7P17097 686 aaPredicted RBP2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 IGFBP2P18065 325 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 CYP2A7P20853 494 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 UGT1A4P22310 534 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 CCND1P24385 295 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 TEAD1P28347 426 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 KRT9P35527 623 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 FOLR3P41439 243 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 GABRB2P47870 512 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 CSNK1DP48730 415 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 TNFSF10P50591 281 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 ARSEP51690 589 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 NDUFA8P51970 172 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 DGKQP52824 942 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 DLX5P56178 289 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 GSDMDP57764 484 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 ARG2P78540 354 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 SRSF2Q01130 221 aaKnown RBP2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 GCNT1Q02742 428 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 TFF3Q07654 80 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 DMPKQ09013 629 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 OLIG2Q13516 323 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 GALNT3Q14435 633 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 RPE65Q16518 533 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 CYP2A13Q16696 494 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 CA9Q16790 459 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 KHDC1Q4VXA5 237 aaKnown RBP2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 RPUSD3Q6P087 351 aaKnown RBP2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 SCYL2Q6P3W7 929 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 ABRAXAS1Q6UWZ7 409 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 CDHR3Q6ZTQ4 885 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 ADGRG6Q86SQ4 1221 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 GLB1L2Q8IW92 636 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 ARHGAP12Q8IWW6 846 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 CHERPQ8IWX8 916 aaKnown RBP2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 PRSS58Q8IYP2 241 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 UMODL1-AS1Q8N2C9 162 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 RPRMLQ8N4K4 120 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 AOPEPQ8N6M6 819 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 SIRT6Q8N6T7 355 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 NPWQ8N729 165 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 CNTD1Q8N815 330 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 ZNF610Q8N9Z0 462 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 OR4E2Q8NGC2 313 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 ZFP28Q8NHY6 868 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 SLC30A5Q8TAD4 765 aa2.84□□□□□ -1.95
CHMP4A-208ENST00000534106 PPP1R14CQ8TAE6 165 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms