RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 CARTPTQ16568 116 aa17.05■□□□□ 0.32
PHRF1-205ENST00000533464 TIGD6Q17RP2 521 aa17.05■□□□□ 0.32
PHRF1-205ENST00000533464 ZNF776Q68DI1 518 aaPredicted RBP17.05■□□□□ 0.32
PHRF1-205ENST00000533464 OR4K1Q8NGD4 311 aa17.05■□□□□ 0.32
PHRF1-205ENST00000533464 YTHDF1Q9BYJ9 559 aaKnown RBP17.05■□□□□ 0.32
PHRF1-205ENST00000533464 ANKHQ9HCJ1 492 aa17.05■□□□□ 0.32
PHRF1-205ENST00000533464 MKL2Q9ULH7 1088 aa17.05■□□□□ 0.32
PHRF1-205ENST00000533464 GNB5O14775 395 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 GRID2O43424 1007 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 UBXN2BQ14CS0 331 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 ZBED5Q49AG3 693 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 LIN54Q6MZP7 749 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 FRRS1Q6ZNA5 592 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 GALNT15Q8N3T1 639 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 ZUFSPQ96AP4 578 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 AURKBQ96GD4 344 aaPredicted RBP17.04■□□□□ 0.32
PHRF1-205ENST00000533464 ELOVL2Q9NXB9 296 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 MYH7P12883 1935 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 LOC100130705A0A1B0GUX0 176 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 TSPAN6O43657 245 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 ECDO95905 644 aaPredicted RBP17.04■□□□□ 0.32
PHRF1-205ENST00000533464 FPR1P21462 350 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 ALDH3A2P51648 485 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 MEF2AQ02078 507 aaPredicted RBP17.04■□□□□ 0.32
PHRF1-205ENST00000533464 EIPR1Q53HC9 387 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 CLEC12AQ5QGZ9 265 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 SLC30A6Q6NXT4 461 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 PEG10Q86TG7 708 aaKnown RBP17.04■□□□□ 0.32
PHRF1-205ENST00000533464 OR4E2Q8NGC2 313 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 OTUB2Q96DC9 234 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 WDR6Q9NNW5 1121 aaKnown RBP17.04■□□□□ 0.32
PHRF1-205ENST00000533464 BACE2Q9Y5Z0 518 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 STON1Q9Y6Q2 735 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 AHDC1Q5TGY3 1603 aaPredicted RBP17.04■□□□□ 0.32
PHRF1-205ENST00000533464 ARHGEF33A8MVX0 844 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 KMOO15229 486 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 H1F0P07305 194 aaKnown RBP17.04■□□□□ 0.32
PHRF1-205ENST00000533464 BTN3A2P78410 334 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 GPR68Q15743 365 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 ZNF805Q5CZA5 627 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 SLC8B1Q6J4K2 584 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 MEAF6Q9HAF1 191 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 CLIC3O95833 236 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 ACRV1P26436 265 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 LAPTM4AQ15012 233 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 SUZ12Q15022 739 aaKnown RBP17.04■□□□□ 0.32
PHRF1-205ENST00000533464 PTGES3Q15185 160 aaKnown RBP17.04■□□□□ 0.32
PHRF1-205ENST00000533464 MARCH8Q5T0T0 291 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 SCD5Q86SK9 330 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 ZNF554Q86TJ5 538 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 AKAP14Q86UN6 197 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 FBXL20Q96IG2 436 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 GPC6Q9Y625 555 aaPredicted RBP17.04■□□□□ 0.32
PHRF1-205ENST00000533464 UBR2Q8IWV8 1755 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 H7C0S8 307 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 C6orf47O95873 294 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 DGKEP52429 567 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 KLHL22Q53GT1 634 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 KLHDC10Q6PID8 442 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 OMA1Q96E52 524 aa17.04■□□□□ 0.32
PHRF1-205ENST00000533464 FDXRP22570 491 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 HMGCLP35914 325 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 MNDAP41218 407 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 PNPLA1Q8N8W4 532 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 FAM46DQ8NEK8 389 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 GLYATL1Q969I3 302 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 PMEPA1Q969W9 287 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 MARCH7Q9H992 704 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 MYH15Q9Y2K3 1946 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 IQCMA0A1B0GVH7 501 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 SNNO75324 88 aaPredicted RBP17.03■□□□□ 0.32
PHRF1-205ENST00000533464 C8BP07358 591 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 IL4RP24394 825 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 CCT3P49368 545 aaKnown RBP17.03■□□□□ 0.32
PHRF1-205ENST00000533464 NUDT6P53370 316 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 IRF5Q13568 498 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 CEACAM7Q14002 265 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 GRM2Q14416 872 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 NOXRED1Q6NXP6 359 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 PHF12Q96QT6 1004 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 KCNS3Q9BQ31 491 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 RPF2Q9H7B2 306 aaKnown RBP17.03■□□□□ 0.32
PHRF1-205ENST00000533464 SNTG1Q9NSN8 517 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 TIAM2Q8IVF5 1701 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 CHRM1P11229 460 aaPredicted RBP17.03■□□□□ 0.32
PHRF1-205ENST00000533464 SPATS1Q496A3 300 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 SNX7Q9UNH6 387 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 POFUT2Q9Y2G5 429 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 ALS2Q96Q42 1657 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 GIMD1P0DJR0 217 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 GRK6P43250 576 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 KCNC3Q14003 757 aa17.03■□□□□ 0.32
PHRF1-205ENST00000533464 RNASE11Q8TAA1 199 aaKnown RBP17.03■□□□□ 0.32
PHRF1-205ENST00000533464 WWP2O00308 870 aa17.02■□□□□ 0.32
PHRF1-205ENST00000533464 HTRA2O43464 458 aaPredicted RBP17.02■□□□□ 0.32
PHRF1-205ENST00000533464 DHFRP00374 187 aa17.02■□□□□ 0.32
PHRF1-205ENST00000533464 HOXB2P14652 356 aa17.02■□□□□ 0.32
PHRF1-205ENST00000533464 ZNF763Q0D2J5 394 aa17.02■□□□□ 0.32
PHRF1-205ENST00000533464 OR4D1Q15615 310 aa17.02■□□□□ 0.32
PHRF1-205ENST00000533464 ZNF648Q5T619 568 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms