RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 TERTO14746 1132 aaKnown RBP11.45□□□□□ -0.58
SSBP3-214ENST00000533209 P2RX6O15547 441 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 CCNT2O60583 730 aaKnown RBP11.45□□□□□ -0.58
SSBP3-214ENST00000533209 PRAMEF4O60810 478 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 MED26O95402 600 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 EIF2S1P05198 315 aaKnown RBP11.45□□□□□ -0.58
SSBP3-214ENST00000533209 EPORP19235 508 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 WT1P19544 449 aaPredicted RBP11.45□□□□□ -0.58
SSBP3-214ENST00000533209 ALDH18A1P54886 795 aaKnown RBP11.45□□□□□ -0.58
SSBP3-214ENST00000533209 REEP5Q00765 189 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 MEF2AQ02078 507 aaPredicted RBP11.45□□□□□ -0.58
SSBP3-214ENST00000533209 IFFO1Q0D2I5 559 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 CDC16Q13042 620 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 GRM7Q14831 915 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 SETDB1Q15047 1291 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 PDK4Q16654 411 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 PFKFB4Q16877 469 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 MANEAQ5SRI9 462 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 PRAMEF9Q5VWM5 478 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 LCN10Q6JVE6 187 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 FAM199XQ6PEV8 388 aaPredicted RBP11.45□□□□□ -0.58
SSBP3-214ENST00000533209 SLCO4C1Q6ZQN7 724 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 LRRC70Q7Z2Q7 622 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 VN1R4Q7Z5H5 301 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 LCA5Q86VQ0 697 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 ARHGEF39Q8N4T4 335 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 ZNF740Q8NDX6 193 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 HNRNPLLQ8WVV9 542 aaKnown RBP11.45□□□□□ -0.58
SSBP3-214ENST00000533209 CLIP3Q96DZ5 547 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 THAP11Q96EK4 314 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 GBP5Q96PP8 586 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 MRPL57Q9BQC6 102 aaKnown RBP11.45□□□□□ -0.58
SSBP3-214ENST00000533209 NDC1Q9BTX1 674 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 TMEM109Q9BVC6 243 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 SARGQ9BW04 601 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 ROPN1BQ9BZX4 212 aaPredicted RBP11.45□□□□□ -0.58
SSBP3-214ENST00000533209 MRPL46Q9H2W6 279 aaKnown RBP11.45□□□□□ -0.58
SSBP3-214ENST00000533209 ROPN1Q9HAT0 212 aaPredicted RBP11.45□□□□□ -0.58
SSBP3-214ENST00000533209 WDR70Q9NW82 654 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 GPRC5BQ9NZH0 403 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 TMEM216Q9P0N5 145 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 CPSF2Q9P2I0 782 aaKnown RBP11.45□□□□□ -0.58
SSBP3-214ENST00000533209 LGALS13Q9UHV8 139 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 CROTQ9UKG9 612 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 PCDHGA4Q9Y5G9 962 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 PCM1Q15154 2024 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 ITPR1Q14643 2758 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 TRBC2A0A5B9 178 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 HYKKA2RU49 373 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 LRRC14BA6NHZ5 514 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 STATHP02808 62 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 CAPN1P07384 714 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 GSTA1P08263 222 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 CCNYL3P0C7X3 344 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 C1GALT1C1LP0DN25 315 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 GFAPP14136 432 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 LIFP15018 202 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 KRT15P19012 456 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 GNAZP19086 355 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 ITGAXP20702 1163 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 F8A1P23610 371 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 VARSP26640 1264 aaKnown RBP11.44□□□□□ -0.58
SSBP3-214ENST00000533209 GRK3P35626 688 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 ARSFP54793 590 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 PCBP2Q15366 365 aaKnown RBP eCLIP11.44□□□□□ -0.58
SSBP3-214ENST00000533209 HKDC1Q2TB90 917 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 C1orf189Q5VU69 101 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 YOD1Q5VVQ6 348 aaPredicted RBP11.44□□□□□ -0.58
SSBP3-214ENST00000533209 BROXQ5VW32 411 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 ATG9BQ674R7 924 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 C16orf46Q6P387 395 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 TMPRSS11BQ86T26 416 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 RIBC1Q8N443 379 aaPredicted RBP11.44□□□□□ -0.58
SSBP3-214ENST00000533209 CSNK1A1LQ8N752 337 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 PTGR2Q8N8N7 351 aaPredicted RBP11.44□□□□□ -0.58
SSBP3-214ENST00000533209 TTC29Q8NA56 475 aaPredicted RBP11.44□□□□□ -0.58
SSBP3-214ENST00000533209 MFSD9Q8NBP5 474 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 PROKR1Q8TCW9 393 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 CT55Q8WUE5 264 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 MR1Q95460 341 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 RERGQ96A58 199 aaPredicted RBP11.44□□□□□ -0.58
SSBP3-214ENST00000533209 TM4SF19Q96DZ7 209 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 C10orf90Q96M02 699 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 RUFY1Q96T51 708 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 CAPS2Q9BXY5 557 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 SLC7A5P2Q9GIP4 190 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 CHST8Q9H2A9 424 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 GPN2Q9H9Y4 310 aaPredicted RBP11.44□□□□□ -0.58
SSBP3-214ENST00000533209 CUTCQ9NTM9 273 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 OPTCQ9UBM4 332 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 IL17BQ9UHF5 180 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 RUVBL1Q9Y265 456 aaKnown RBP11.44□□□□□ -0.58
SSBP3-214ENST00000533209 PTPRQQ9UMZ3 2332 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 HEATR5BQ9P2D3 2071 aa11.44□□□□□ -0.58
SSBP3-214ENST00000533209 LAMA5O15230 3695 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 KMT2BQ9UMN6 2715 aaPredicted RBP11.43□□□□□ -0.58
SSBP3-214ENST00000533209 A0A1B0GX78 115 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 K7EPI3 171 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 TXNDC9O14530 226 aa11.43□□□□□ -0.58
SSBP3-214ENST00000533209 CLGNO14967 610 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms