RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 THUMPD3Q9BV44 507 aaKnown RBP11.85□□□□□ -0.51
CHD7-211ENST00000532149 BTBD1Q9H0C5 482 aa11.85□□□□□ -0.51
CHD7-211ENST00000532149 PCDHAC1Q9H158 963 aa11.85□□□□□ -0.51
CHD7-211ENST00000532149 IL1RL2Q9HB29 575 aa11.85□□□□□ -0.51
CHD7-211ENST00000532149 OLAHQ9NV23 265 aa11.85□□□□□ -0.51
CHD7-211ENST00000532149 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.85□□□□□ -0.51
CHD7-211ENST00000532149 PCDHGB4Q9UN71 923 aa11.85□□□□□ -0.51
CHD7-211ENST00000532149 INVSQ9Y283 1065 aa11.85□□□□□ -0.51
CHD7-211ENST00000532149 MTCH2Q9Y6C9 303 aa11.85□□□□□ -0.51
CHD7-211ENST00000532149 PIAS3Q9Y6X2 628 aa11.85□□□□□ -0.51
CHD7-211ENST00000532149 TBC1D3DA0A087WVF3 549 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 TBC1D3IA0A087WXS9 549 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 TBC1D3EA0A087X179 549 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 TBC1D3KA0A087X1G2 549 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 TRBV5-3A0A0A0MS03 114 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 TBC1D3FA6NER0 549 aaPredicted RBP11.84□□□□□ -0.51
CHD7-211ENST00000532149 ANKDD1BA6NHY2 528 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 TBC1D3LB9A6J9 549 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 RFXAPO00287 272 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 RNASET2O00584 256 aaKnown RBP11.84□□□□□ -0.51
CHD7-211ENST00000532149 DEAF1O75398 565 aaPredicted RBP11.84□□□□□ -0.51
CHD7-211ENST00000532149 PAK4O96013 591 aaPredicted RBP11.84□□□□□ -0.51
CHD7-211ENST00000532149 TBC1D3HP0C7X1 549 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 RAP2AP10114 183 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 CD1EP15812 388 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 GGT1P19440 569 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 LTBRP36941 435 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 TSFMP43897 325 aaKnown RBP11.84□□□□□ -0.51
CHD7-211ENST00000532149 BDKRB1P46663 353 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 RAB28P51157 221 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 CHRNB3Q05901 458 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 EPS8Q12929 822 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 VEZF1Q14119 521 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 MYBPC3Q14896 1274 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 ADRM1Q16186 407 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 CYP51A1Q16850 503 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 UAP1L1Q3KQV9 507 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 SPANXN4Q5MJ08 99 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 CPTPQ5TA50 214 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 TBC1D3GQ6DHY5 549 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 TBC1D3CQ6IPX1 549 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 PPP4R4Q6NUP7 873 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 CRTC3Q6UUV7 619 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 SUSD1Q6UWL2 747 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 TMPRSS11BQ86T26 416 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 SLC30A8Q8IWU4 369 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 TBC1D3Q8IZP1 549 aaPredicted RBP11.84□□□□□ -0.51
CHD7-211ENST00000532149 MARVELD2Q8N4S9 558 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 PLA2G15Q8NCC3 412 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 SRFBP1Q8NEF9 429 aaKnown RBP11.84□□□□□ -0.51
CHD7-211ENST00000532149 OR4K1Q8NGD4 311 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 SH3KBP1Q96B97 665 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 MTFMTQ96DP5 389 aaKnown RBP11.84□□□□□ -0.51
CHD7-211ENST00000532149 REXO5Q96IC2 774 aaKnown RBP11.84□□□□□ -0.51
CHD7-211ENST00000532149 APOLD1Q96LR9 279 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 RNF145Q96MT1 663 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 RDH12Q96NR8 316 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 KAT8Q9H7Z6 458 aaKnown RBP11.84□□□□□ -0.51
CHD7-211ENST00000532149 COPS7BQ9H9Q2 264 aaPredicted RBP11.84□□□□□ -0.51
CHD7-211ENST00000532149 POLMQ9NP87 494 aaPredicted RBP11.84□□□□□ -0.51
CHD7-211ENST00000532149 MYNNQ9NPC7 610 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 SLC2A4RGQ9NR83 387 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 GEMIN8Q9NWZ8 242 aaKnown RBP11.84□□□□□ -0.51
CHD7-211ENST00000532149 ZNF282Q9UDV7 671 aaPredicted RBP11.84□□□□□ -0.51
CHD7-211ENST00000532149 ATP6V1HQ9UI12 483 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 PCOLCE2Q9UKZ9 415 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 DMTF1Q9Y222 760 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 PCDHB11Q9Y5F2 797 aa11.84□□□□□ -0.51
CHD7-211ENST00000532149 NUMA1Q14980 2115 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 A0A1W2PQF6 199 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 PIPSLA2A3N6 862 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 PRR19A6NJB7 356 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 LCE2BO14633 110 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 SCAMP2O15127 329 aaKnown RBP11.83□□□□□ -0.52
CHD7-211ENST00000532149 AKAP10O43572 662 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 GUCY1B2O75343 617 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 SORBS2O94875 1100 aaKnown RBP11.83□□□□□ -0.52
CHD7-211ENST00000532149 EPN2O95208 641 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 KLF8O95600 359 aaPredicted RBP11.83□□□□□ -0.52
CHD7-211ENST00000532149 LDLRP01130 860 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 IGLV3-19P01714 112 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 ANXA4P09525 319 aaPredicted RBP11.83□□□□□ -0.52
CHD7-211ENST00000532149 PCNAP12004 261 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 COX7A2P14406 83 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 HNRNPA2B1P22626 353 aaKnown RBP11.83□□□□□ -0.52
CHD7-211ENST00000532149 PEX2P28328 305 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 AKT2P31751 481 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 SMAD4Q13485 552 aaKnown RBP11.83□□□□□ -0.52
CHD7-211ENST00000532149 CAPRIN1Q14444 709 aaKnown RBP11.83□□□□□ -0.52
CHD7-211ENST00000532149 KRT33BQ14525 404 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 TEAD4Q15561 434 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 PLA2G4EQ3MJ16 856 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 LRIT3Q3SXY7 679 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 TMEM35AQ53FP2 167 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 PYCR3Q53H96 274 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 C2orf27AQ580R0 203 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 RNF111Q6ZNA4 994 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 FAM129CQ86XR2 697 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 MICU2Q8IYU8 434 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 METTL4Q8N3J2 472 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms