RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 PLCD4Q9BRC7 762 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 SLC29A3Q9BZD2 475 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 RAB33BQ9H082 229 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 ELOVL6Q9H5J4 265 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 FARSBQ9NSD9 589 aaKnown RBP18.28■□□□□ 0.52
SMPD1-205ENST00000531303 EPHA6Q9UF33 1036 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 DCTN4Q9UJW0 460 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 ZNF490Q9ULM2 529 aaPredicted RBP18.28■□□□□ 0.52
SMPD1-205ENST00000531303 DNAJC15Q9Y5T4 150 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 IGHV5-51A0A0C4DH38 117 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 AGRPO00253 132 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 TNFSF14O43557 240 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 CPNE6O95741 557 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 CHEK2O96017 543 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 STATHP02808 62 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 JUNP05412 331 aaKnown RBP18.27■□□□□ 0.52
SMPD1-205ENST00000531303 HRH2P25021 359 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 CXCR2P25025 360 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 GRK3P35626 688 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 SEPHS1P49903 392 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 CYP4F2P78329 520 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 REEP5Q00765 189 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 IFT88Q13099 833 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 ZIC1Q15915 447 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 UGT3A2Q3SY77 523 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 VWA5B1Q5TIE3 1220 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 CGB2Q6NT52 195 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 WDR74Q6RFH5 385 aaPredicted RBP18.27■□□□□ 0.52
SMPD1-205ENST00000531303 TMIGD1Q6UXZ0 262 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 TMPRSS9Q7Z410 1059 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 RFWD2Q8NHY2 731 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 BAHD1Q8TBE0 780 aaPredicted RBP18.27■□□□□ 0.52
SMPD1-205ENST00000531303 TWIST2Q8WVJ9 160 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 MAGEB10Q96LZ2 347 aaPredicted RBP18.27■□□□□ 0.52
SMPD1-205ENST00000531303 TRAPPC9Q96Q05 1148 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 ELAC2Q9BQ52 826 aaKnown RBP18.27■□□□□ 0.52
SMPD1-205ENST00000531303 TRIM55Q9BYV6 548 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 NUF2Q9BZD4 464 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 NSRP1Q9H0G5 558 aaKnown RBP18.27■□□□□ 0.52
SMPD1-205ENST00000531303 C1GALT1Q9NS00 363 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 SNX6Q9UNH7 406 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 USH1CQ9Y6N9 552 aa18.27■□□□□ 0.52
SMPD1-205ENST00000531303 TLCD2A6NGC4 264 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 HGSO14964 777 aaPredicted RBP18.26■□□□□ 0.51
SMPD1-205ENST00000531303 LCMT2O60294 686 aaKnown RBP18.26■□□□□ 0.51
SMPD1-205ENST00000531303 SH3BGRLO75368 114 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 ULK1O75385 1050 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 FKBP9O95302 570 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 KRT6AP02538 564 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 KRT6BP04259 564 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 LINC00032P0C843 101 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 TROVE2P10155 538 aaKnown RBP eCLIP18.26■□□□□ 0.51
SMPD1-205ENST00000531303 KRT6CP48668 564 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 ACADVLP49748 655 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 FRG2Q64ET8 278 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 TMEM71Q6P5X7 295 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 DEFB124Q8NES8 71 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 OR7G3Q8NG95 312 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 SELENOMQ8WWX9 145 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 CCT6BQ92526 530 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 ZUFSPQ96AP4 578 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 FAR2Q96K12 515 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 FCRL4Q96PJ5 515 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 FRG2BQ96QU4 278 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 GFM1Q96RP9 751 aaKnown RBP18.26■□□□□ 0.51
SMPD1-205ENST00000531303 MTERF1Q99551 399 aaKnown RBP18.26■□□□□ 0.51
SMPD1-205ENST00000531303 TUBB1Q9H4B7 451 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 SOHLH2Q9NX45 425 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 PCDHGA11Q9Y5H2 935 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 GVINP1Q7Z2Y8 2422 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 ZNF292O60281 2723 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 A0A0J9YVX5 310 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 OR2A25A4D2G3 310 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 H0YIV9 168 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 PIP5K1BO14986 540 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 HDAC3O15379 428 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 GFRA3O60609 400 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 CTSVO60911 334 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 PDYNP01213 254 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 C9P02748 559 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 SERPIND1P05546 499 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 BCL6P41182 706 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 AQP5P55064 265 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 BTKQ06187 659 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 E2F2Q14209 437 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 ABRAXAS2Q15018 415 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 FBXO42Q6P3S6 717 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 ZNF574Q6ZN55 896 aaPredicted RBP18.26■□□□□ 0.51
SMPD1-205ENST00000531303 MAVSQ7Z434 540 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 PIP4P1Q86T03 277 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.26■□□□□ 0.51
SMPD1-205ENST00000531303 C19orf47Q8N9M1 422 aaKnown RBP18.26■□□□□ 0.51
SMPD1-205ENST00000531303 UBE2E3Q969T4 207 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 REPS1Q96D71 796 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 CCT8L2Q96SF2 557 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 CD180Q99467 661 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 FAM60AQ9NP50 221 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 VTI1BQ9UEU0 232 aa18.26■□□□□ 0.51
SMPD1-205ENST00000531303 MN1Q10571 1320 aaPredicted RBP18.25■□□□□ 0.51
SMPD1-205ENST00000531303 A0A0G2JND7 137 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms