RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 TNNT3P45378 269 aaPredicted RBP7.74□□□□□ -1.17
CD44-232ENST00000531118 PMPCAQ10713 525 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 PDK2Q15119 407 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 SLC1A5Q15758 541 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 HADHQ16836 314 aaKnown RBP7.74□□□□□ -1.17
CD44-232ENST00000531118 SLC25A35Q3KQZ1 300 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 FIGNQ5HY92 759 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 MICALCLQ6ZW33 695 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 CPNE8Q86YQ8 564 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 HORMAD2Q8N7B1 307 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 POGLUT1Q8NBL1 392 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 OR4K2Q8NGD2 314 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 CABS1Q96KC9 395 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 OLFM3Q96PB7 478 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 IL17FQ96PD4 163 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 MENTQ9BUN1 341 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 SARGQ9BW04 601 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 YIPF2Q9BWQ6 316 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 TGIF2Q9GZN2 237 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 KCNK13Q9HB14 408 aa7.74□□□□□ -1.17
CD44-232ENST00000531118 MKKSQ9NPJ1 570 aaPredicted RBP7.74□□□□□ -1.17
CD44-232ENST00000531118 LOC105369274A0A096LPK9 316 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 LOC102723532A0A0G2JNH3 316 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 A0A0J9YVX5 310 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 PPP1R12AO14974 1030 aaPredicted RBP7.73□□□□□ -1.17
CD44-232ENST00000531118 CRLF1O75462 422 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 TPM2P07951 284 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 GSTM1P09488 218 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 GZMAP12544 262 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 CDK11BP21127 795 aaKnown RBP7.73□□□□□ -1.17
CD44-232ENST00000531118 PSMB5P28074 263 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 PEX19P40855 299 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 ZFP36L2P47974 494 aaKnown RBP7.73□□□□□ -1.17
CD44-232ENST00000531118 GSTM4Q03013 218 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 PDK1Q15118 436 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 MAPKAPK3Q16644 382 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 SYT16Q17RD7 645 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 PRTGQ2VWP7 1150 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 SYTL3Q4VX76 610 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 TEX44Q53QW1 395 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 CDKAL1Q5VV42 579 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 E4F1Q66K89 784 aaPredicted RBP7.73□□□□□ -1.17
CD44-232ENST00000531118 ARHGAP11AQ6P4F7 1023 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 C16orf47Q6ZP98 133 aaPredicted RBP7.73□□□□□ -1.17
CD44-232ENST00000531118 IRF2BP2Q7Z5L9 587 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 WDR53Q7Z5U6 358 aaPredicted RBP7.73□□□□□ -1.17
CD44-232ENST00000531118 SNX20Q7Z614 316 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 PAQR7Q86WK9 346 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 CXorf67Q86X51 503 aaPredicted RBP7.73□□□□□ -1.17
CD44-232ENST00000531118 OR4N4Q8N0Y3 316 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 LGI4Q8N135 537 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 C2orf73Q8N5S3 287 aaPredicted RBP7.73□□□□□ -1.17
CD44-232ENST00000531118 SLC5A8Q8N695 610 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 KCTD6Q8NC69 237 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 IPMKQ8NFU5 416 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 OR13C4Q8NGS5 318 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 FAM222BQ8WU58 562 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 HEXDCQ8WVB3 486 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 SLC22A18Q96BI1 424 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 MVB12AQ96EY5 273 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 OXNAD1Q96HP4 312 aaPredicted RBP7.73□□□□□ -1.17
CD44-232ENST00000531118 TEKT5Q96M29 485 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 Q96MF0 132 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 VN1R1Q9GZP7 353 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 FAM96AQ9H5X1 160 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 PLEKHF2Q9H8W4 249 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 C19orf25Q9UFG5 118 aaPredicted RBP7.73□□□□□ -1.17
CD44-232ENST00000531118 ZC3H7BQ9UGR2 993 aaKnown RBP7.73□□□□□ -1.17
CD44-232ENST00000531118 CIDEBQ9UHD4 219 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 IP6K2Q9UHH9 426 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 HEY1Q9Y5J3 304 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 FAM215AQ9Y5M1 114 aa7.73□□□□□ -1.17
CD44-232ENST00000531118 ABCA1O95477 2261 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.72□□□□□ -1.17
CD44-232ENST00000531118 TRBV5-4A0A0C4DH59 114 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 A0A0G2JNJ9 132 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 LGALS16A8MUM7 142 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 SRPX2O60687 465 aaPredicted RBP7.72□□□□□ -1.17
CD44-232ENST00000531118 FKBP9O95302 570 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 EPOP01588 193 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 EIF2S1P05198 315 aaKnown RBP7.72□□□□□ -1.17
CD44-232ENST00000531118 ANXA5P08758 320 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 TACR1P25103 407 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 ACRV1P26436 265 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 SLC26A3P40879 764 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 PRKCIP41743 596 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 ZNF140P52738 457 aaPredicted RBP7.72□□□□□ -1.17
CD44-232ENST00000531118 MAT1AQ00266 395 aaKnown RBP7.72□□□□□ -1.17
CD44-232ENST00000531118 GRB7Q14451 532 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 BRD3Q15059 726 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 TAF1AQ15573 450 aaPredicted RBP7.72□□□□□ -1.17
CD44-232ENST00000531118 FBXW10Q5XX13 1052 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 SLC9A4Q6AI14 798 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 NPNTQ6UXI9 565 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 ZNF571Q7Z3V5 609 aaPredicted RBP7.72□□□□□ -1.17
CD44-232ENST00000531118 CPEB2Q7Z5Q1 589 aaKnown RBP7.72□□□□□ -1.17
CD44-232ENST00000531118 ZNF227Q86WZ6 799 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 LIX1LQ8IVB5 337 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 MAP7D3Q8IWC1 876 aa7.72□□□□□ -1.17
CD44-232ENST00000531118 OR10Q1Q8NGQ4 319 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms